RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
TRAPPC9-208ENST00000520857 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
TRAPPC9-208ENST00000520857 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
TRAPPC9-208ENST00000520857 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
TRAPPC9-208ENST00000520857 FAT2Q9NYQ8 4349 aa6.48□□□□□ -1.37
TRAPPC9-208ENST00000520857 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
TRAPPC9-208ENST00000520857 XP32Q5T750 250 aa6.46□□□□□ -1.38
TRAPPC9-208ENST00000520857 PKD1P98161 4303 aa6.44□□□□□ -1.38
TRAPPC9-208ENST00000520857 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
TRAPPC9-208ENST00000520857 SACSQ9NZJ4 4579 aa6.43□□□□□ -1.38
TRAPPC9-208ENST00000520857 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
TRAPPC9-208ENST00000520857 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC9-208ENST00000520857 Q5VSD8 79 aa6.41□□□□□ -1.38
TRAPPC9-208ENST00000520857 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
TRAPPC9-208ENST00000520857 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
TRAPPC9-208ENST00000520857 M0QZ58 72 aa6.38□□□□□ -1.39
TRAPPC9-208ENST00000520857 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
TRAPPC9-208ENST00000520857 R4GN34 69 aa6.35□□□□□ -1.39
TRAPPC9-208ENST00000520857 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
TRAPPC9-208ENST00000520857 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
TRAPPC9-208ENST00000520857 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
TRAPPC9-208ENST00000520857 KMT2CQ8NEZ4 4911 aaKnown RBP6.21□□□□□ -1.41
TRAPPC9-208ENST00000520857 HSPG2P98160 4391 aa6.19□□□□□ -1.42
TRAPPC9-208ENST00000520857 RYR2Q92736 4967 aa6.18□□□□□ -1.42
TRAPPC9-208ENST00000520857 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
TRAPPC9-208ENST00000520857 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
TRAPPC9-208ENST00000520857 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
TRAPPC9-208ENST00000520857 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
TRAPPC9-208ENST00000520857 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
TRAPPC9-208ENST00000520857 LRP2P98164 4655 aa6.04□□□□□ -1.44
TRAPPC9-208ENST00000520857 RYR3Q15413 4870 aa6.04□□□□□ -1.44
TRAPPC9-208ENST00000520857 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
TRAPPC9-208ENST00000520857 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
TRAPPC9-208ENST00000520857 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC9-208ENST00000520857 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.46
TRAPPC9-208ENST00000520857 LPAP08519 4548 aa5.96□□□□□ -1.46
TRAPPC9-208ENST00000520857 TNXBP22105 4242 aa5.95□□□□□ -1.46
TRAPPC9-208ENST00000520857 J3QL48 77 aa5.92□□□□□ -1.46
TRAPPC9-208ENST00000520857 RYR1P21817 5038 aa5.92□□□□□ -1.46
TRAPPC9-208ENST00000520857 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
TRAPPC9-208ENST00000520857 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
TRAPPC9-208ENST00000520857 EPPK1P58107 5090 aaKnown RBP5.85□□□□□ -1.47
TRAPPC9-208ENST00000520857 TNP1P09430 55 aa5.8□□□□□ -1.48
TRAPPC9-208ENST00000520857 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
TRAPPC9-208ENST00000520857 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
TRAPPC9-208ENST00000520857 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
TRAPPC9-208ENST00000520857 M0R2T5 61 aa5.6□□□□□ -1.51
TRAPPC9-208ENST00000520857 HERC2O95714 4834 aa5.53□□□□□ -1.52
TRAPPC9-208ENST00000520857 MUC2Q02817 5179 aa5.49□□□□□ -1.53
TRAPPC9-208ENST00000520857 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
TRAPPC9-208ENST00000520857 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
TRAPPC9-208ENST00000520857 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
TRAPPC9-208ENST00000520857 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
TRAPPC9-208ENST00000520857 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
TRAPPC9-208ENST00000520857 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
TRAPPC9-208ENST00000520857 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
TRAPPC9-208ENST00000520857 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
TRAPPC9-208ENST00000520857 HERC1Q15751 4861 aa5.29□□□□□ -1.56
TRAPPC9-208ENST00000520857 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC9-208ENST00000520857 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
TRAPPC9-208ENST00000520857 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
TRAPPC9-208ENST00000520857 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
TRAPPC9-208ENST00000520857 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
TRAPPC9-208ENST00000520857 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
TRAPPC9-208ENST00000520857 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
TRAPPC9-208ENST00000520857 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
TRAPPC9-208ENST00000520857 INE1O15225 51 aa5.09□□□□□ -1.6
TRAPPC9-208ENST00000520857 MT1FP04733 61 aa5.09□□□□□ -1.6
TRAPPC9-208ENST00000520857 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
TRAPPC9-208ENST00000520857 MT2AP02795 61 aa5.06□□□□□ -1.6
TRAPPC9-208ENST00000520857 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
TRAPPC9-208ENST00000520857 MT1HP80294 61 aa5.05□□□□□ -1.6
TRAPPC9-208ENST00000520857 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
TRAPPC9-208ENST00000520857 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
TRAPPC9-208ENST00000520857 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
TRAPPC9-208ENST00000520857 MT1XP80297 61 aa4.93□□□□□ -1.62
TRAPPC9-208ENST00000520857 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC9-208ENST00000520857 MT1BP07438 61 aa4.9□□□□□ -1.63
TRAPPC9-208ENST00000520857 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
TRAPPC9-208ENST00000520857 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
TRAPPC9-208ENST00000520857 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
TRAPPC9-208ENST00000520857 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
TRAPPC9-208ENST00000520857 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
TRAPPC9-208ENST00000520857 KMT2DO14686 5537 aa4.66□□□□□ -1.66
TRAPPC9-208ENST00000520857 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
TRAPPC9-208ENST00000520857 KRTAP4-8Q9BYQ9 185 aa4.64□□□□□ -1.67
TRAPPC9-208ENST00000520857 USH2AO75445 5202 aa4.62□□□□□ -1.67
TRAPPC9-208ENST00000520857 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
TRAPPC9-208ENST00000520857 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
TRAPPC9-208ENST00000520857 LCE2BO14633 110 aa4.52□□□□□ -1.69
TRAPPC9-208ENST00000520857 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
TRAPPC9-208ENST00000520857 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
TRAPPC9-208ENST00000520857 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC9-208ENST00000520857 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
TRAPPC9-208ENST00000520857 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
TRAPPC9-208ENST00000520857 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
TRAPPC9-208ENST00000520857 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
TRAPPC9-208ENST00000520857 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
TRAPPC9-208ENST00000520857 FSIP2Q5CZC0 6907 aa4.34□□□□□ -1.71
TRAPPC9-208ENST00000520857 MT1LQ93083 61 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms