RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 MT1AP04731 61 aa0.6□□□□□ -2.31
PABPC1-211ENST00000519596 SPRR2DP22532 72 aa0.6□□□□□ -2.31
PABPC1-211ENST00000519596 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
PABPC1-211ENST00000519596 CUBNO60494 3623 aa0.59□□□□□ -2.31
PABPC1-211ENST00000519596 SONP18583 2426 aaKnown RBP0.59□□□□□ -2.31
PABPC1-211ENST00000519596 DNAH10Q8IVF4 4471 aa0.59□□□□□ -2.31
PABPC1-211ENST00000519596 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
PABPC1-211ENST00000519596 SPRR2BP35325 72 aa0.59□□□□□ -2.31
PABPC1-211ENST00000519596 ZZEF1O43149 2961 aa0.59□□□□□ -2.32
PABPC1-211ENST00000519596 CELSR3Q9NYQ7 3312 aa0.59□□□□□ -2.32
PABPC1-211ENST00000519596 FRYLO94915 3013 aa0.59□□□□□ -2.32
PABPC1-211ENST00000519596 HSPG2P98160 4391 aa0.59□□□□□ -2.32
PABPC1-211ENST00000519596 ANKHD1Q8IWZ3 2542 aaKnown RBP0.59□□□□□ -2.32
PABPC1-211ENST00000519596 NBEAL2Q6ZNJ1 2754 aa0.58□□□□□ -2.32
PABPC1-211ENST00000519596 TACC2O95359 2948 aa0.58□□□□□ -2.32
PABPC1-211ENST00000519596 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
PABPC1-211ENST00000519596 CFAP54Q96N23 3096 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 ANKRD11Q6UB99 2663 aaPredicted RBP0.57□□□□□ -2.32
PABPC1-211ENST00000519596 HTN3P15516 51 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 SPRR2AP35326 72 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 ITPR1Q14643 2758 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 COL6A3P12111 3177 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 TLN2Q9Y4G6 2542 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 LAMA5O15230 3695 aa0.57□□□□□ -2.32
PABPC1-211ENST00000519596 RANBP2P49792 3224 aaKnown RBP0.57□□□□□ -2.32
PABPC1-211ENST00000519596 DMXL1Q9Y485 3027 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 CMYA5Q8N3K9 4069 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 LPAP08519 4548 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 KRTAP19-5Q3LI72 72 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 ZANQ9Y493 2812 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
PABPC1-211ENST00000519596 FAT3Q8TDW7 4589 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 ZFYVE26Q68DK2 2539 aa0.56□□□□□ -2.32
PABPC1-211ENST00000519596 LRP1Q07954 4544 aaKnown RBP0.56□□□□□ -2.32
PABPC1-211ENST00000519596 NEBP20929 6669 aa0.55□□□□□ -2.32
PABPC1-211ENST00000519596 FLNBO75369 2602 aaKnown RBP0.55□□□□□ -2.32
PABPC1-211ENST00000519596 SMG1Q96Q15 3661 aaKnown RBP0.55□□□□□ -2.32
PABPC1-211ENST00000519596 SPTBN5Q9NRC6 3674 aaKnown RBP0.55□□□□□ -2.32
PABPC1-211ENST00000519596 RELNP78509 3460 aa0.55□□□□□ -2.32
PABPC1-211ENST00000519596 DNAH9Q9NYC9 4486 aa0.55□□□□□ -2.32
PABPC1-211ENST00000519596 MAP1AP78559 2803 aaPredicted RBP0.55□□□□□ -2.32
PABPC1-211ENST00000519596 LRBAP50851 2863 aa0.55□□□□□ -2.32
PABPC1-211ENST00000519596 DMXL2Q8TDJ6 3036 aa0.54□□□□□ -2.32
PABPC1-211ENST00000519596 PLECQ15149 4684 aaKnown RBP0.54□□□□□ -2.32
PABPC1-211ENST00000519596 NIPBLQ6KC79 2804 aaeCLIP0.54□□□□□ -2.321e-8■□□□□ 9.7
PABPC1-211ENST00000519596 SYNE2Q8WXH0 6885 aaKnown RBP0.54□□□□□ -2.32
PABPC1-211ENST00000519596 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
PABPC1-211ENST00000519596 CSMD1Q96PZ7 3565 aa0.54□□□□□ -2.32
PABPC1-211ENST00000519596 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
PABPC1-211ENST00000519596 CFAP46Q8IYW2 2715 aa0.54□□□□□ -2.32
PABPC1-211ENST00000519596 PRUNE2Q8WUY3 3088 aa0.53□□□□□ -2.32
PABPC1-211ENST00000519596 APOBP04114 4563 aaKnown RBP0.53□□□□□ -2.32
PABPC1-211ENST00000519596 NBEAQ8NFP9 2946 aa0.53□□□□□ -2.32
PABPC1-211ENST00000519596 ATMQ13315 3056 aa0.53□□□□□ -2.32
PABPC1-211ENST00000519596 KRTAP6-2Q3LI66 62 aa0.53□□□□□ -2.32
PABPC1-211ENST00000519596 USP9XQ93008 2570 aaPredicted RBP0.53□□□□□ -2.32
PABPC1-211ENST00000519596 TRRAPQ9Y4A5 3859 aa0.53□□□□□ -2.33
PABPC1-211ENST00000519596 TEP1Q99973 2627 aaKnown RBP0.52□□□□□ -2.33
PABPC1-211ENST00000519596 DNAH5Q8TE73 4624 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 C5orf42Q9H799 3197 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 TENM3Q9P273 2699 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 TGP01266 2768 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 CEP350Q5VT06 3117 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 DMDP11532 3685 aa0.52□□□□□ -2.33
PABPC1-211ENST00000519596 FLNAP21333 2647 aaKnown RBP0.51□□□□□ -2.33
PABPC1-211ENST00000519596 CENPEQ02224 2701 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 SVEP1Q4LDE5 3571 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 LAMA3Q16787 3333 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 DNAH12Q6ZR08 3092 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
PABPC1-211ENST00000519596 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
PABPC1-211ENST00000519596 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 SPRR2EP22531 72 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 DOPEY1Q5JWR5 2465 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 TRIOO75962 3097 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 BOD1L1Q8NFC6 3051 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 FAT1Q14517 4588 aa0.5□□□□□ -2.33
PABPC1-211ENST00000519596 MXRA5Q9NR99 2828 aa0.49□□□□□ -2.33
PABPC1-211ENST00000519596 FASNP49327 2511 aaKnown RBP0.49□□□□□ -2.33
PABPC1-211ENST00000519596 HTTP42858 3142 aa0.49□□□□□ -2.33
PABPC1-211ENST00000519596 DNAH17Q9UFH2 4485 aa0.48□□□□□ -2.33
PABPC1-211ENST00000519596 ITPR2Q14571 2701 aa0.48□□□□□ -2.33
PABPC1-211ENST00000519596 KMT2DO14686 5537 aa0.48□□□□□ -2.33
PABPC1-211ENST00000519596 DEFB4AO15263 64 aa0.48□□□□□ -2.33
PABPC1-211ENST00000519596 VPS13CQ709C8 3753 aa0.48□□□□□ -2.33
PABPC1-211ENST00000519596 SPTAN1Q13813 2472 aaKnown RBP0.47□□□□□ -2.33
PABPC1-211ENST00000519596 NBEAL1Q6ZS30 2694 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 LRP1BQ9NZR2 4599 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 SZT2Q5T011 3432 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 LAMA1P25391 3075 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 KALRNO60229 2985 aa0.47□□□□□ -2.33
PABPC1-211ENST00000519596 FREM2Q5SZK8 3169 aa0.46□□□□□ -2.34
PABPC1-211ENST00000519596 MT1EP04732 61 aa0.46□□□□□ -2.34
PABPC1-211ENST00000519596 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms