RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
PABPC1-211ENST00000519596 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
PABPC1-211ENST00000519596 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-211ENST00000519596 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
PABPC1-211ENST00000519596 FOXD1Q16676 465 aa13.89□□□□□ -0.19
PABPC1-211ENST00000519596 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
PABPC1-211ENST00000519596 MSH5O43196 834 aa13.08□□□□□ -0.32
PABPC1-211ENST00000519596 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-211ENST00000519596 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
PABPC1-211ENST00000519596 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
PABPC1-211ENST00000519596 ADRA2BP18089 450 aa12.66□□□□□ -0.38
PABPC1-211ENST00000519596 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-211ENST00000519596 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
PABPC1-211ENST00000519596 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
PABPC1-211ENST00000519596 CACNB1Q02641 598 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-211ENST00000519596 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
PABPC1-211ENST00000519596 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
PABPC1-211ENST00000519596 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-211ENST00000519596 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
PABPC1-211ENST00000519596 C1QBPQ07021 282 aaKnown RBP10.94□□□□□ -0.66
PABPC1-211ENST00000519596 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
PABPC1-211ENST00000519596 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-211ENST00000519596 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
PABPC1-211ENST00000519596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
PABPC1-211ENST00000519596 NCBP3Q53F19 620 aaKnown RBP10.5□□□□□ -0.73
PABPC1-211ENST00000519596 POTEHQ6S545 545 aa10.44□□□□□ -0.74
PABPC1-211ENST00000519596 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
PABPC1-211ENST00000519596 U3KPZ7 1027 aaPredicted RBP10.36□□□□□ -0.75
PABPC1-211ENST00000519596 DSG3P32926 999 aa10.33□□□□□ -0.76
PABPC1-211ENST00000519596 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
PABPC1-211ENST00000519596 CAPN15O75808 1086 aa10.29□□□□□ -0.76
PABPC1-211ENST00000519596 ABCB7O75027 752 aa10.06□□□□□ -0.8
PABPC1-211ENST00000519596 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
PABPC1-211ENST00000519596 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
PABPC1-211ENST00000519596 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-211ENST00000519596 APLP2Q06481 763 aa9.93□□□□□ -0.82
PABPC1-211ENST00000519596 KCNA4P22459 653 aa9.9□□□□□ -0.82
PABPC1-211ENST00000519596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
PABPC1-211ENST00000519596 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
PABPC1-211ENST00000519596 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
PABPC1-211ENST00000519596 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
PABPC1-211ENST00000519596 CHRDL2Q6WN34 429 aa9.78□□□□□ -0.84
PABPC1-211ENST00000519596 POLA2Q14181 598 aa9.7□□□□□ -0.86
PABPC1-211ENST00000519596 SP7Q8TDD2 431 aaPredicted RBP9.62□□□□□ -0.87
PABPC1-211ENST00000519596 MYCNP04198 464 aaPredicted RBP9.6□□□□□ -0.87
PABPC1-211ENST00000519596 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
PABPC1-211ENST00000519596 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
PABPC1-211ENST00000519596 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
PABPC1-211ENST00000519596 ATF5Q9Y2D1 282 aaPredicted RBP9.48□□□□□ -0.89
PABPC1-211ENST00000519596 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
PABPC1-211ENST00000519596 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
PABPC1-211ENST00000519596 HAX1O00165 279 aa9.4□□□□□ -0.9
PABPC1-211ENST00000519596 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
PABPC1-211ENST00000519596 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
PABPC1-211ENST00000519596 EVX2Q03828 476 aa9.32□□□□□ -0.92
PABPC1-211ENST00000519596 FOXD4L1Q9NU39 408 aa9.31□□□□□ -0.92
PABPC1-211ENST00000519596 SLC4A1APQ9BWU0 796 aaKnown RBP9.24□□□□□ -0.93
PABPC1-211ENST00000519596 PRKAR2AP13861 404 aaKnown RBP9.13□□□□□ -0.95
PABPC1-211ENST00000519596 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
PABPC1-211ENST00000519596 ZBTB22O15209 634 aa9.12□□□□□ -0.95
PABPC1-211ENST00000519596 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
PABPC1-211ENST00000519596 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
PABPC1-211ENST00000519596 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
PABPC1-211ENST00000519596 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
PABPC1-211ENST00000519596 GABBR2O75899 941 aa9.05□□□□□ -0.96
PABPC1-211ENST00000519596 FBLN2P98095 1184 aa9.05□□□□□ -0.96
PABPC1-211ENST00000519596 SPDYE1Q8NFV5 336 aaPredicted RBP9.05□□□□□ -0.96
PABPC1-211ENST00000519596 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
PABPC1-211ENST00000519596 LHX8Q68G74 356 aa9.02□□□□□ -0.97
PABPC1-211ENST00000519596 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
PABPC1-211ENST00000519596 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
PABPC1-211ENST00000519596 SSUH2Q9Y2M2 353 aa8.98□□□□□ -0.97
PABPC1-211ENST00000519596 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
PABPC1-211ENST00000519596 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
PABPC1-211ENST00000519596 PRR29P0C7W0 189 aa8.86□□□□□ -0.99
PABPC1-211ENST00000519596 PABPN1Q86U42 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
PABPC1-211ENST00000519596 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
PABPC1-211ENST00000519596 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-211ENST00000519596 PLSCR2Q9NRY7 297 aa8.75□□□□□ -1.01
PABPC1-211ENST00000519596 CLCN6P51797 869 aa8.69□□□□□ -1.02
PABPC1-211ENST00000519596 DCBLD2Q96PD2 775 aa8.69□□□□□ -1.02
PABPC1-211ENST00000519596 ZNF579Q8NAF0 562 aaKnown RBP8.65□□□□□ -1.02
PABPC1-211ENST00000519596 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
PABPC1-211ENST00000519596 GALR2O43603 387 aaPredicted RBP8.61□□□□□ -1.03
PABPC1-211ENST00000519596 OTUD5Q96G74 571 aa8.61□□□□□ -1.03
PABPC1-211ENST00000519596 POTEB2H3BUK9 544 aa8.59□□□□□ -1.03
PABPC1-211ENST00000519596 CREBZFQ9NS37 354 aa8.59□□□□□ -1.03
PABPC1-211ENST00000519596 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
PABPC1-211ENST00000519596 POTEMA6NI47 508 aa8.51□□□□□ -1.05
PABPC1-211ENST00000519596 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
PABPC1-211ENST00000519596 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
PABPC1-211ENST00000519596 CSRNP3Q8WYN3 585 aa8.47□□□□□ -1.05
PABPC1-211ENST00000519596 EHMT2Q96KQ7 1210 aa8.47□□□□□ -1.05
PABPC1-211ENST00000519596 STAG3Q9UJ98 1225 aa8.46□□□□□ -1.06
PABPC1-211ENST00000519596 PAK3O75914 559 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-211ENST00000519596 POTEJP0CG39 1038 aa8.41□□□□□ -1.06
PABPC1-211ENST00000519596 MNX1P50219 401 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-211ENST00000519596 METRNQ9UJH8 293 aa8.39□□□□□ -1.07
PABPC1-211ENST00000519596 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-211ENST00000519596 MS4A3Q96HJ5 214 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms