RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 EPPK1P58107 5090 aaKnown RBP-0.34□□□□□ -2.46
SQLE-202ENST00000518604 NMES1Q9C002 83 aa-0.34□□□□□ -2.46
SQLE-202ENST00000518604 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.34□□□□□ -2.46
SQLE-202ENST00000518604 LMO7Q8WWI1 1683 aa-0.34□□□□□ -2.46
SQLE-202ENST00000518604 DYNC1H1Q14204 4646 aaKnown RBP-0.34□□□□□ -2.46
SQLE-202ENST00000518604 CELSR3Q9NYQ7 3312 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 H3BUA1 57 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 DEFB110Q30KQ9 67 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 LINC00308Q8TCZ7 52 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 DNAH10Q8IVF4 4471 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 EFCAB6Q5THR3 1501 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 A0A1B0GUL6 1792 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 KIF21BO75037 1637 aa-0.35□□□□□ -2.47
SQLE-202ENST00000518604 C5orf42Q9H799 3197 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 FRYQ5TBA9 3013 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 BIRC6Q9NR09 4857 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 SERF2P84101 59 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 SMIM5Q71RC9 77 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 DNHD1Q96M86 4753 aa-0.36□□□□□ -2.47
SQLE-202ENST00000518604 KRTAP20-2Q3LI61 65 aa-0.37□□□□□ -2.47
SQLE-202ENST00000518604 TMEM167BQ9NRX6 74 aa-0.37□□□□□ -2.47
SQLE-202ENST00000518604 TEX15Q9BXT5 2789 aa-0.37□□□□□ -2.47
SQLE-202ENST00000518604 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
SQLE-202ENST00000518604 ADCY10Q96PN6 1610 aa-0.38□□□□□ -2.47
SQLE-202ENST00000518604 MMP24-AS1A0A0U1RRL7 71 aa-0.38□□□□□ -2.47
SQLE-202ENST00000518604 DNAH17Q9UFH2 4485 aa-0.38□□□□□ -2.47
SQLE-202ENST00000518604 IQGAP1P46940 1657 aa-0.39□□□□□ -2.47
SQLE-202ENST00000518604 MT4P47944 62 aa-0.39□□□□□ -2.47
SQLE-202ENST00000518604 ABCA5Q8WWZ7 1642 aa-0.39□□□□□ -2.47
SQLE-202ENST00000518604 LAMA3Q16787 3333 aa-0.39□□□□□ -2.47
SQLE-202ENST00000518604 DOPEY1Q5JWR5 2465 aa-0.4□□□□□ -2.47
SQLE-202ENST00000518604 NOP10Q9NPE3 64 aaKnown RBP-0.4□□□□□ -2.47
SQLE-202ENST00000518604 RYR2Q92736 4967 aa-0.4□□□□□ -2.47
SQLE-202ENST00000518604 FANCD2Q9BXW9 1451 aa-0.41□□□□□ -2.47
SQLE-202ENST00000518604 COL6A5A8TX70 2615 aa-0.41□□□□□ -2.47
SQLE-202ENST00000518604 ITPR1Q14643 2758 aa-0.41□□□□□ -2.47
SQLE-202ENST00000518604 SMR3BP02814 79 aaPredicted RBP-0.41□□□□□ -2.48
SQLE-202ENST00000518604 TNP1P09430 55 aa-0.41□□□□□ -2.48
SQLE-202ENST00000518604 KRTAP8-1Q8IUC2 63 aa-0.41□□□□□ -2.48
SQLE-202ENST00000518604 KAAG1Q9UBP8 84 aa-0.41□□□□□ -2.48
SQLE-202ENST00000518604 ABCC8Q09428 1581 aa-0.41□□□□□ -2.48
SQLE-202ENST00000518604 H0YGX0 51 aa-0.42□□□□□ -2.48
SQLE-202ENST00000518604 MGAQ8IWI9 3026 aa-0.43□□□□□ -2.48
SQLE-202ENST00000518604 CSMD1Q96PZ7 3565 aa-0.43□□□□□ -2.48
SQLE-202ENST00000518604 RNF213Q63HN8 5207 aa-0.43□□□□□ -2.48
SQLE-202ENST00000518604 NFAT5O94916 1531 aa-0.43□□□□□ -2.48
SQLE-202ENST00000518604 ADGRG4Q8IZF6 3080 aa-0.44□□□□□ -2.48
SQLE-202ENST00000518604 CHD7Q9P2D1 2997 aa-0.44□□□□□ -2.48
SQLE-202ENST00000518604 SPTAN1Q13813 2472 aaKnown RBP-0.44□□□□□ -2.48
SQLE-202ENST00000518604 M0QY20 66 aa-0.44□□□□□ -2.48
SQLE-202ENST00000518604 TRRAPQ9Y4A5 3859 aa-0.45□□□□□ -2.48
SQLE-202ENST00000518604 PLNP26678 52 aa-0.45□□□□□ -2.48
SQLE-202ENST00000518604 MT1HP80294 61 aa-0.45□□□□□ -2.48
SQLE-202ENST00000518604 WFDC10BQ8IUB3 73 aa-0.45□□□□□ -2.48
SQLE-202ENST00000518604 DDX60Q8IY21 1712 aaKnown RBP-0.46□□□□□ -2.48
SQLE-202ENST00000518604 SMIM27A0A1W2PRY6 76 aa-0.46□□□□□ -2.48
SQLE-202ENST00000518604 TFF3Q07654 80 aa-0.46□□□□□ -2.48
SQLE-202ENST00000518604 SRCAPQ6ZRS2 3230 aa-0.46□□□□□ -2.48
SQLE-202ENST00000518604 ABCA13Q86UQ4 5058 aa-0.46□□□□□ -2.48
SQLE-202ENST00000518604 M0QZ58 72 aa-0.47□□□□□ -2.48
SQLE-202ENST00000518604 ABRACLQ9P1F3 81 aa-0.47□□□□□ -2.48
SQLE-202ENST00000518604 ZFHX4Q86UP3 3567 aa-0.47□□□□□ -2.49
SQLE-202ENST00000518604 A8MTW9 85 aa-0.48□□□□□ -2.49
SQLE-202ENST00000518604 LRBAP50851 2863 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 CRYBG3Q68DQ2 2970 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 LINC01546A6NGU7 62 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 DEFB1P60022 68 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 CLPSL2Q6UWE3 100 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 CMC2Q9NRP2 79 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 DNAH5Q8TE73 4624 aa-0.49□□□□□ -2.49
SQLE-202ENST00000518604 LAMA2P24043 3122 aaKnown RBP-0.51□□□□□ -2.49
SQLE-202ENST00000518604 MYO9AB2RTY4 2548 aa-0.52□□□□□ -2.49
SQLE-202ENST00000518604 SMIM2Q9BVW6 85 aa-0.54□□□□□ -2.5
SQLE-202ENST00000518604 NIPBLQ6KC79 2804 aaeCLIP-0.54□□□□□ -2.5
SQLE-202ENST00000518604 EYSQ5T1H1 3165 aa-0.54□□□□□ -2.5
SQLE-202ENST00000518604 CFAP46Q8IYW2 2715 aa-0.54□□□□□ -2.5
SQLE-202ENST00000518604 DEFB131AP59861 70 aa-0.55□□□□□ -2.5
SQLE-202ENST00000518604 SMG1Q96Q15 3661 aaKnown RBP-0.55□□□□□ -2.5
SQLE-202ENST00000518604 DMXL2Q8TDJ6 3036 aa-0.56□□□□□ -2.5
SQLE-202ENST00000518604 CLTCL1P53675 1640 aa-0.56□□□□□ -2.5
SQLE-202ENST00000518604 SNRPGP15A8MWD9 76 aa-0.56□□□□□ -2.5
SQLE-202ENST00000518604 TRPM2O94759 1503 aa-0.56□□□□□ -2.5
SQLE-202ENST00000518604 MT1EP04732 61 aa-0.57□□□□□ -2.5
SQLE-202ENST00000518604 POLR2KP53803 58 aaKnown RBP-0.57□□□□□ -2.5
SQLE-202ENST00000518604 MT1XP80297 61 aa-0.57□□□□□ -2.5
SQLE-202ENST00000518604 CSMD2Q7Z408 3487 aa-0.58□□□□□ -2.5
SQLE-202ENST00000518604 CEP295Q9C0D2 2601 aa-0.6□□□□□ -2.51
SQLE-202ENST00000518604 VPS13CQ709C8 3753 aa-0.6□□□□□ -2.51
SQLE-202ENST00000518604 MT1LQ93083 61 aa-0.61□□□□□ -2.51
SQLE-202ENST00000518604 IQGAP2Q13576 1575 aa-0.62□□□□□ -2.51
SQLE-202ENST00000518604 NDUFA1O15239 70 aa-0.62□□□□□ -2.51
SQLE-202ENST00000518604 SPART-AS1P0CW21 52 aa-0.62□□□□□ -2.51
SQLE-202ENST00000518604 PRUNE2Q8WUY3 3088 aa-0.64□□□□□ -2.51
SQLE-202ENST00000518604 CFAP54Q96N23 3096 aa-0.65□□□□□ -2.51
SQLE-202ENST00000518604 TLN1Q9Y490 2541 aaKnown RBP-0.66□□□□□ -2.52
SQLE-202ENST00000518604 ATP7AQ04656 1500 aa-0.67□□□□□ -2.52
SQLE-202ENST00000518604 MYO15AQ9UKN7 3530 aa-0.67□□□□□ -2.52
SQLE-202ENST00000518604 ITPR2Q14571 2701 aa-0.69□□□□□ -2.52
SQLE-202ENST00000518604 LEAP2Q969E1 77 aa-0.69□□□□□ -2.52
SQLE-202ENST00000518604 FRYLO94915 3013 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms