RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 A6NN06 94 aa12.37□□□□□ -0.43
SLIT3-204ENST00000518140 TPRXLQ17RH7 258 aa12.36□□□□□ -0.43
SLIT3-204ENST00000518140 KTN1-AS1Q86SY8 53 aa12.34□□□□□ -0.43
SLIT3-204ENST00000518140 SEC61GP60059 68 aa12.34□□□□□ -0.43
SLIT3-204ENST00000518140 LRP2P98164 4655 aa12.32□□□□□ -0.44
SLIT3-204ENST00000518140 PCLOQ9Y6V0 5065 aa12.3□□□□□ -0.44
SLIT3-204ENST00000518140 A0A1B0GU69 56 aa12.25□□□□□ -0.45
SLIT3-204ENST00000518140 HERC1Q15751 4861 aa12.12□□□□□ -0.47
SLIT3-204ENST00000518140 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
SLIT3-204ENST00000518140 SPATA8Q6RVD6 105 aa12.1□□□□□ -0.47
SLIT3-204ENST00000518140 UQCR11O14957 56 aa12.04□□□□□ -0.48
SLIT3-204ENST00000518140 RBM12B-AS1Q9P1G2 102 aa12.03□□□□□ -0.48
SLIT3-204ENST00000518140 MIR22HGQ0VDD5 57 aa12.01□□□□□ -0.49
SLIT3-204ENST00000518140 COX6B2Q6YFQ2 88 aa11.98□□□□□ -0.49
SLIT3-204ENST00000518140 SEC61BP60468 96 aaKnown RBP11.91□□□□□ -0.5
SLIT3-204ENST00000518140 HMCN2Q8NDA2 5059 aa11.9□□□□□ -0.5
SLIT3-204ENST00000518140 KRTAP4-1Q9BYQ7 146 aa11.87□□□□□ -0.51
SLIT3-204ENST00000518140 MUC17Q685J3 4493 aa11.8□□□□□ -0.52
SLIT3-204ENST00000518140 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
SLIT3-204ENST00000518140 ADM2Q7Z4H4 148 aa11.72□□□□□ -0.53
SLIT3-204ENST00000518140 MUC2Q02817 5179 aa11.67□□□□□ -0.54
SLIT3-204ENST00000518140 H1FX-AS1Q4G0G2 97 aa11.66□□□□□ -0.54
SLIT3-204ENST00000518140 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
SLIT3-204ENST00000518140 S4R3F8 94 aa11.59□□□□□ -0.55
SLIT3-204ENST00000518140 H0YAA0 97 aa11.59□□□□□ -0.55
SLIT3-204ENST00000518140 A0A1B0GU33 70 aa11.56□□□□□ -0.56
SLIT3-204ENST00000518140 KRTAP19-2Q3LHN2 52 aa11.53□□□□□ -0.56
SLIT3-204ENST00000518140 LINC01554Q52M75 96 aa11.44□□□□□ -0.58
SLIT3-204ENST00000518140 CSAG1Q6PB30 78 aa11.43□□□□□ -0.58
SLIT3-204ENST00000518140 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
SLIT3-204ENST00000518140 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
SLIT3-204ENST00000518140 KRTAP3-2Q9BYR7 98 aa11.26□□□□□ -0.61
SLIT3-204ENST00000518140 FLGP20930 4061 aaPredicted RBP11.26□□□□□ -0.61
SLIT3-204ENST00000518140 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
SLIT3-204ENST00000518140 K7ERS5 55 aa11.23□□□□□ -0.61
SLIT3-204ENST00000518140 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
SLIT3-204ENST00000518140 P0C880 135 aa11.17□□□□□ -0.62
SLIT3-204ENST00000518140 KRTAP25-1Q3LHN0 102 aa11.15□□□□□ -0.62
SLIT3-204ENST00000518140 FAT4Q6V0I7 4981 aa11.14□□□□□ -0.63
SLIT3-204ENST00000518140 KRTAP13-4Q3LI77 160 aa11.04□□□□□ -0.64
SLIT3-204ENST00000518140 ROMO1P60602 79 aa10.97□□□□□ -0.65
SLIT3-204ENST00000518140 A0A0D9SG42 100 aa10.94□□□□□ -0.66
SLIT3-204ENST00000518140 MT1HP80294 61 aa10.94□□□□□ -0.66
SLIT3-204ENST00000518140 CRIPTQ9P021 101 aa10.88□□□□□ -0.67
SLIT3-204ENST00000518140 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
SLIT3-204ENST00000518140 M0R2T5 61 aa10.82□□□□□ -0.68
SLIT3-204ENST00000518140 M0QZ58 72 aa10.73□□□□□ -0.69
SLIT3-204ENST00000518140 KRTAP12-2P59991 146 aa10.7□□□□□ -0.7
SLIT3-204ENST00000518140 R4GN34 69 aa10.7□□□□□ -0.7
SLIT3-204ENST00000518140 KRTAP12-1P59990 96 aa10.64□□□□□ -0.71
SLIT3-204ENST00000518140 SPINT4Q6UDR6 99 aa10.59□□□□□ -0.71
SLIT3-204ENST00000518140 KRTAP9-8Q9BYQ0 159 aa10.57□□□□□ -0.72
SLIT3-204ENST00000518140 MT2AP02795 61 aa10.54□□□□□ -0.72
SLIT3-204ENST00000518140 C10orf95Q9H7T3 257 aa10.52□□□□□ -0.73
SLIT3-204ENST00000518140 MT1FP04733 61 aa10.51□□□□□ -0.73
SLIT3-204ENST00000518140 KRTAP10-10P60014 251 aa10.45□□□□□ -0.74
SLIT3-204ENST00000518140 H3BS24 57 aa10.41□□□□□ -0.74
SLIT3-204ENST00000518140 LCE2AQ5TA79 106 aaPredicted RBP10.4□□□□□ -0.74
SLIT3-204ENST00000518140 KRTAP19-1Q8IUB9 90 aa10.37□□□□□ -0.75
SLIT3-204ENST00000518140 SPRR2GQ9BYE4 73 aa10.33□□□□□ -0.76
SLIT3-204ENST00000518140 KRTAP15-1Q3LI76 137 aa10.18□□□□□ -0.78
SLIT3-204ENST00000518140 KRTAP9-3Q9BYQ3 159 aa10.18□□□□□ -0.78
SLIT3-204ENST00000518140 CAMK2N1Q7Z7J9 78 aa10.03□□□□□ -0.8
SLIT3-204ENST00000518140 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
SLIT3-204ENST00000518140 PLAC4Q8WY50 150 aa9.98□□□□□ -0.81
SLIT3-204ENST00000518140 MT1BP07438 61 aa9.96□□□□□ -0.81
SLIT3-204ENST00000518140 LCE2BO14633 110 aa9.92□□□□□ -0.82
SLIT3-204ENST00000518140 NDUFAF8A1L188 74 aa9.88□□□□□ -0.83
SLIT3-204ENST00000518140 PP632Q6XCG6 107 aa9.74□□□□□ -0.85
SLIT3-204ENST00000518140 USH2AO75445 5202 aa9.68□□□□□ -0.86
SLIT3-204ENST00000518140 MT1XP80297 61 aa9.67□□□□□ -0.86
SLIT3-204ENST00000518140 KRTAP10-5P60370 271 aa9.66□□□□□ -0.86
SLIT3-204ENST00000518140 TNP1P09430 55 aa9.54□□□□□ -0.88
SLIT3-204ENST00000518140 KRTAP23-1A1A580 65 aa9.44□□□□□ -0.9
SLIT3-204ENST00000518140 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
SLIT3-204ENST00000518140 KRTAP10-7P60409 375 aaPredicted RBP9.33□□□□□ -0.92
SLIT3-204ENST00000518140 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
SLIT3-204ENST00000518140 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
SLIT3-204ENST00000518140 SSPOA2VEC9 5147 aa9.32□□□□□ -0.92
SLIT3-204ENST00000518140 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
SLIT3-204ENST00000518140 LCE3AQ5TA76 89 aa9.22□□□□□ -0.93
SLIT3-204ENST00000518140 KRTAP19-6Q3LI70 58 aa9.17□□□□□ -0.94
SLIT3-204ENST00000518140 KRTAP10-12P60413 245 aa9.15□□□□□ -0.94
SLIT3-204ENST00000518140 SPRR5A0A1B0GTR4 108 aa9.09□□□□□ -0.95
SLIT3-204ENST00000518140 KMT2DO14686 5537 aa9.05□□□□□ -0.96
SLIT3-204ENST00000518140 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
SLIT3-204ENST00000518140 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
SLIT3-204ENST00000518140 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
SLIT3-204ENST00000518140 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
SLIT3-204ENST00000518140 FCGBPQ9Y6R7 5405 aaPredicted RBP8.92□□□□□ -0.98
SLIT3-204ENST00000518140 A0A0A0MQY5 61 aa8.84□□□□□ -0.99
SLIT3-204ENST00000518140 KRTAP12-3P60328 96 aa8.8□□□□□ -1
SLIT3-204ENST00000518140 KRTAP19-5Q3LI72 72 aa8.78□□□□□ -1
SLIT3-204ENST00000518140 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
SLIT3-204ENST00000518140 KRTAP19-7Q3SYF9 63 aa8.63□□□□□ -1.03
SLIT3-204ENST00000518140 MACF1Q9UPN3 7388 aaKnown RBP8.49□□□□□ -1.05
SLIT3-204ENST00000518140 MT1EP04732 61 aa8.44□□□□□ -1.06
SLIT3-204ENST00000518140 MT1LQ93083 61 aa8.3□□□□□ -1.08
SLIT3-204ENST00000518140 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
SLIT3-204ENST00000518140 SYNE2Q8WXH0 6885 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms