RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CDC42SE1Q9NRR8 79 aa13.54□□□□□ -0.24
COL13A1-210ENST00000517713 LPAP08519 4548 aa13.53□□□□□ -0.24
COL13A1-210ENST00000517713 LRP2P98164 4655 aa13.52□□□□□ -0.24
COL13A1-210ENST00000517713 SEC61GP60059 68 aa13.51□□□□□ -0.25
COL13A1-210ENST00000517713 UQCR11O14957 56 aa13.39□□□□□ -0.27
COL13A1-210ENST00000517713 SEC61BP60468 96 aaKnown RBP13.39□□□□□ -0.27
COL13A1-210ENST00000517713 S4R3F8 94 aa13.39□□□□□ -0.27
COL13A1-210ENST00000517713 KRTAP3-3Q9BYR6 98 aa13.38□□□□□ -0.27
COL13A1-210ENST00000517713 H1FX-AS1Q4G0G2 97 aa13.36□□□□□ -0.27
COL13A1-210ENST00000517713 RBM12B-AS1Q9P1G2 102 aa13.35□□□□□ -0.27
COL13A1-210ENST00000517713 SPATA8Q6RVD6 105 aa13.32□□□□□ -0.28
COL13A1-210ENST00000517713 MIR22HGQ0VDD5 57 aa13.3□□□□□ -0.28
COL13A1-210ENST00000517713 PMAIP1Q13794 54 aa13.2□□□□□ -0.3
COL13A1-210ENST00000517713 A0A1B0GU33 70 aa13.18□□□□□ -0.3
COL13A1-210ENST00000517713 KRTAP4-1Q9BYQ7 146 aa13.13□□□□□ -0.31
COL13A1-210ENST00000517713 H0YAA0 97 aa13.06□□□□□ -0.32
COL13A1-210ENST00000517713 MUC17Q685J3 4493 aa13.05□□□□□ -0.32
COL13A1-210ENST00000517713 A6NN06 94 aa13.04□□□□□ -0.32
COL13A1-210ENST00000517713 KRTAP10-6P60371 365 aaPredicted RBP13.04□□□□□ -0.32
COL13A1-210ENST00000517713 PCLOQ9Y6V0 5065 aa13.03□□□□□ -0.32
COL13A1-210ENST00000517713 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
COL13A1-210ENST00000517713 CSAG1Q6PB30 78 aa13.01□□□□□ -0.33
COL13A1-210ENST00000517713 P0C880 135 aa12.88□□□□□ -0.35
COL13A1-210ENST00000517713 ADM2Q7Z4H4 148 aa12.88□□□□□ -0.35
COL13A1-210ENST00000517713 HERC1Q15751 4861 aa12.84□□□□□ -0.35
COL13A1-210ENST00000517713 KRTAP19-2Q3LHN2 52 aa12.83□□□□□ -0.36
COL13A1-210ENST00000517713 HMCN2Q8NDA2 5059 aa12.78□□□□□ -0.36
COL13A1-210ENST00000517713 KRTAP13-4Q3LI77 160 aa12.77□□□□□ -0.37
COL13A1-210ENST00000517713 KTN1-AS1Q86SY8 53 aa12.76□□□□□ -0.37
COL13A1-210ENST00000517713 A0A0D9SG42 100 aa12.6□□□□□ -0.39
COL13A1-210ENST00000517713 K7ERS5 55 aa12.58□□□□□ -0.4
COL13A1-210ENST00000517713 MUC2Q02817 5179 aa12.57□□□□□ -0.4
COL13A1-210ENST00000517713 M0QZ58 72 aa12.54□□□□□ -0.4
COL13A1-210ENST00000517713 FLGP20930 4061 aaPredicted RBP12.4□□□□□ -0.42
COL13A1-210ENST00000517713 R4GN34 69 aa12.37□□□□□ -0.43
COL13A1-210ENST00000517713 PRAC1Q96KF2 57 aa12.35□□□□□ -0.43
COL13A1-210ENST00000517713 LCE2CQ5TA81 110 aa12.33□□□□□ -0.43
COL13A1-210ENST00000517713 LORP23490 312 aaPredicted RBP12.32□□□□□ -0.44
COL13A1-210ENST00000517713 KRTAP12-2P59991 146 aa12.31□□□□□ -0.44
COL13A1-210ENST00000517713 KRTAP12-1P59990 96 aa12.3□□□□□ -0.44
COL13A1-210ENST00000517713 SPINT4Q6UDR6 99 aa12.26□□□□□ -0.45
COL13A1-210ENST00000517713 LINC01554Q52M75 96 aa12.21□□□□□ -0.45
COL13A1-210ENST00000517713 RNF213Q63HN8 5207 aa12.16□□□□□ -0.46
COL13A1-210ENST00000517713 ROMO1P60602 79 aa12.16□□□□□ -0.46
COL13A1-210ENST00000517713 UBR4Q5T4S7 5183 aa12.15□□□□□ -0.47
COL13A1-210ENST00000517713 MT1HP80294 61 aa12.06□□□□□ -0.48
COL13A1-210ENST00000517713 M0R2T5 61 aa12.02□□□□□ -0.49
COL13A1-210ENST00000517713 CRIPTQ9P021 101 aa12.01□□□□□ -0.49
COL13A1-210ENST00000517713 FAT4Q6V0I7 4981 aa11.99□□□□□ -0.49
COL13A1-210ENST00000517713 KRTAP25-1Q3LHN0 102 aa11.91□□□□□ -0.5
COL13A1-210ENST00000517713 MT2AP02795 61 aa11.69□□□□□ -0.54
COL13A1-210ENST00000517713 KRTAP9-8Q9BYQ0 159 aa11.69□□□□□ -0.54
COL13A1-210ENST00000517713 SPRR2GQ9BYE4 73 aa11.68□□□□□ -0.54
COL13A1-210ENST00000517713 MT1FP04733 61 aa11.65□□□□□ -0.54
COL13A1-210ENST00000517713 KRTAP10-10P60014 251 aa11.65□□□□□ -0.54
COL13A1-210ENST00000517713 CAMK2N1Q7Z7J9 78 aa11.65□□□□□ -0.54
COL13A1-210ENST00000517713 KRTAP19-1Q8IUB9 90 aa11.62□□□□□ -0.55
COL13A1-210ENST00000517713 C10orf95Q9H7T3 257 aa11.62□□□□□ -0.55
COL13A1-210ENST00000517713 PLAC4Q8WY50 150 aa11.43□□□□□ -0.58
COL13A1-210ENST00000517713 KRTAP19-8Q3LI54 63 aa11.29□□□□□ -0.6
COL13A1-210ENST00000517713 KRTAP9-3Q9BYQ3 159 aa11.23□□□□□ -0.61
COL13A1-210ENST00000517713 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.62
COL13A1-210ENST00000517713 TNP1P09430 55 aa11.14□□□□□ -0.63
COL13A1-210ENST00000517713 MT1BP07438 61 aa11.13□□□□□ -0.63
COL13A1-210ENST00000517713 PP632Q6XCG6 107 aa11.05□□□□□ -0.64
COL13A1-210ENST00000517713 KRTAP23-1A1A580 65 aa10.9□□□□□ -0.66
COL13A1-210ENST00000517713 KRTAP10-5P60370 271 aa10.89□□□□□ -0.67
COL13A1-210ENST00000517713 MT1XP80297 61 aa10.88□□□□□ -0.67
COL13A1-210ENST00000517713 LCE2BO14633 110 aa10.86□□□□□ -0.67
COL13A1-210ENST00000517713 PRO2289Q9P1D8 64 aa10.67□□□□□ -0.7
COL13A1-210ENST00000517713 KRTAP15-1Q3LI76 137 aa10.67□□□□□ -0.7
COL13A1-210ENST00000517713 LCE3AQ5TA76 89 aa10.62□□□□□ -0.71
COL13A1-210ENST00000517713 KRTAP10-7P60409 375 aaPredicted RBP10.5□□□□□ -0.73
COL13A1-210ENST00000517713 KRTAP10-12P60413 245 aa10.47□□□□□ -0.73
COL13A1-210ENST00000517713 USH2AO75445 5202 aa10.4□□□□□ -0.75
COL13A1-210ENST00000517713 KRTAP8-1Q8IUC2 63 aa10.38□□□□□ -0.75
COL13A1-210ENST00000517713 H3BS24 57 aa10.28□□□□□ -0.76
COL13A1-210ENST00000517713 KRTAP12-3P60328 96 aa10.16□□□□□ -0.78
COL13A1-210ENST00000517713 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
COL13A1-210ENST00000517713 SSPOA2VEC9 5147 aa10.05□□□□□ -0.8
COL13A1-210ENST00000517713 KRTAP19-6Q3LI70 58 aa10.04□□□□□ -0.8
COL13A1-210ENST00000517713 SPRR5A0A1B0GTR4 108 aa10□□□□□ -0.81
COL13A1-210ENST00000517713 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
COL13A1-210ENST00000517713 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
COL13A1-210ENST00000517713 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
COL13A1-210ENST00000517713 KRTAP19-5Q3LI72 72 aa9.96□□□□□ -0.81
COL13A1-210ENST00000517713 LUZP6Q538Z0 58 aa9.92□□□□□ -0.82
COL13A1-210ENST00000517713 KMT2DO14686 5537 aa9.85□□□□□ -0.83
COL13A1-210ENST00000517713 FSIP2Q5CZC0 6907 aa9.75□□□□□ -0.85
COL13A1-210ENST00000517713 KRTAP19-7Q3SYF9 63 aa9.7□□□□□ -0.86
COL13A1-210ENST00000517713 LCE3CQ5T5A8 94 aa9.53□□□□□ -0.88
COL13A1-210ENST00000517713 MT1EP04732 61 aa9.49□□□□□ -0.89
COL13A1-210ENST00000517713 FCGBPQ9Y6R7 5405 aaPredicted RBP9.48□□□□□ -0.89
COL13A1-210ENST00000517713 MT1LQ93083 61 aa9.38□□□□□ -0.91
COL13A1-210ENST00000517713 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
COL13A1-210ENST00000517713 KRTAP19-4Q3LI73 84 aa9.35□□□□□ -0.91
COL13A1-210ENST00000517713 KRTAP4-7Q9BYR0 210 aa9.22□□□□□ -0.93
COL13A1-210ENST00000517713 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
COL13A1-210ENST00000517713 KRTAP9-6A8MVA2 160 aa9.07□□□□□ -0.96
COL13A1-210ENST00000517713 KRTAP19-3Q7Z4W3 81 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms