RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SPRR2FQ96RM1 72 aa9□□□□□ -0.97
COL13A1-210ENST00000517713 MT1GP13640 62 aa8.97□□□□□ -0.97
COL13A1-210ENST00000517713 MACF1Q9UPN3 7388 aaKnown RBP8.96□□□□□ -0.98
COL13A1-210ENST00000517713 MUC12Q9UKN1 5478 aa8.93□□□□□ -0.98
COL13A1-210ENST00000517713 MT1MQ8N339 61 aa8.91□□□□□ -0.98
COL13A1-210ENST00000517713 A0A0A0MQY5 61 aa8.9□□□□□ -0.99
COL13A1-210ENST00000517713 KRTAP4-3Q9BYR4 195 aa8.83□□□□□ -1
COL13A1-210ENST00000517713 LCE5AQ5TCM9 118 aa8.81□□□□□ -1
COL13A1-210ENST00000517713 KRTAP5-9P26371 169 aa8.7□□□□□ -1.02
COL13A1-210ENST00000517713 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
COL13A1-210ENST00000517713 SYNE2Q8WXH0 6885 aaKnown RBP8.65□□□□□ -1.02
COL13A1-210ENST00000517713 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
COL13A1-210ENST00000517713 KRTAP2-3P0C7H8 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 KRTAP2-4Q9BYR9 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
COL13A1-210ENST00000517713 LCE1AQ5T7P2 110 aa8.53□□□□□ -1.04
COL13A1-210ENST00000517713 SPRR2EP22531 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 SPRR2BP35325 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 SPRR2AP35326 72 aa8.42□□□□□ -1.06
COL13A1-210ENST00000517713 MDN1Q9NU22 5596 aa8.4□□□□□ -1.06
COL13A1-210ENST00000517713 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.4□□□□□ -1.06
COL13A1-210ENST00000517713 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
COL13A1-210ENST00000517713 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
COL13A1-210ENST00000517713 INE1O15225 51 aa8.23□□□□□ -1.09
COL13A1-210ENST00000517713 SPRR2DP22532 72 aa8.09□□□□□ -1.11
COL13A1-210ENST00000517713 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
COL13A1-210ENST00000517713 MT1AP04731 61 aa7.93□□□□□ -1.14
COL13A1-210ENST00000517713 KRTAP9-7A8MTY7 169 aa7.91□□□□□ -1.14
COL13A1-210ENST00000517713 KRTAP6-1Q3LI64 71 aa7.91□□□□□ -1.14
COL13A1-210ENST00000517713 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
COL13A1-210ENST00000517713 NEBP20929 6669 aa7.63□□□□□ -1.19
COL13A1-210ENST00000517713 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.2
COL13A1-210ENST00000517713 SYNE1Q8NF91 8797 aaKnown RBP7.51□□□□□ -1.21
COL13A1-210ENST00000517713 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
COL13A1-210ENST00000517713 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
COL13A1-210ENST00000517713 KRTAP12-4P60329 112 aa7.37□□□□□ -1.23
COL13A1-210ENST00000517713 LCE3DQ9BYE3 92 aa7.23□□□□□ -1.25
COL13A1-210ENST00000517713 KRTAP6-2Q3LI66 62 aa7.22□□□□□ -1.25
COL13A1-210ENST00000517713 MT3P25713 68 aa7.17□□□□□ -1.26
COL13A1-210ENST00000517713 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
COL13A1-210ENST00000517713 LCE3EQ5T5B0 92 aa7.08□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
COL13A1-210ENST00000517713 MT4P47944 62 aa7.05□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
COL13A1-210ENST00000517713 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
COL13A1-210ENST00000517713 KRTAP20-2Q3LI61 65 aa6.91□□□□□ -1.3
COL13A1-210ENST00000517713 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
COL13A1-210ENST00000517713 KRTAP5-2Q701N4 177 aa6.77□□□□□ -1.33
COL13A1-210ENST00000517713 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
COL13A1-210ENST00000517713 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
COL13A1-210ENST00000517713 OBSCNQ5VST9 7968 aa6.52□□□□□ -1.37
COL13A1-210ENST00000517713 PRM1P04553 51 aa6.42□□□□□ -1.38
COL13A1-210ENST00000517713 LCE1EQ5T753 118 aa6.08□□□□□ -1.44
COL13A1-210ENST00000517713 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
COL13A1-210ENST00000517713 LCE1BQ5T7P3 118 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 KRTAP5-1Q6L8H4 278 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 MUC5ACP98088 5654 aa5.81□□□□□ -1.48
COL13A1-210ENST00000517713 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
COL13A1-210ENST00000517713 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
COL13A1-210ENST00000517713 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
COL13A1-210ENST00000517713 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
COL13A1-210ENST00000517713 KRTAP5-8O75690 187 aa5.64□□□□□ -1.51
COL13A1-210ENST00000517713 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
COL13A1-210ENST00000517713 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
COL13A1-210ENST00000517713 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
COL13A1-210ENST00000517713 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
COL13A1-210ENST00000517713 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
COL13A1-210ENST00000517713 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
COL13A1-210ENST00000517713 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
COL13A1-210ENST00000517713 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
COL13A1-210ENST00000517713 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
COL13A1-210ENST00000517713 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
COL13A1-210ENST00000517713 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
COL13A1-210ENST00000517713 PHGR1C9JFL3 82 aa4.28□□□□□ -1.73
COL13A1-210ENST00000517713 KRTAP21-1Q3LI58 79 aa3.97□□□□□ -1.77
COL13A1-210ENST00000517713 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
COL13A1-210ENST00000517713 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms