RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TACC2O95359 2948 aa0.9□□□□□ -2.27
RNU4-60P-201ENST00000517239 NSD1Q96L73 2696 aaPredicted RBP0.89□□□□□ -2.27
RNU4-60P-201ENST00000517239 PRKDCP78527 4128 aaKnown RBP0.89□□□□□ -2.27
RNU4-60P-201ENST00000517239 M0R2T5 61 aa0.89□□□□□ -2.27
RNU4-60P-201ENST00000517239 MXRA5Q9NR99 2828 aa0.89□□□□□ -2.27
RNU4-60P-201ENST00000517239 WNK1Q9H4A3 2382 aa0.88□□□□□ -2.27
RNU4-60P-201ENST00000517239 RYR2Q92736 4967 aa0.88□□□□□ -2.27
RNU4-60P-201ENST00000517239 SVEP1Q4LDE5 3571 aa0.88□□□□□ -2.27
RNU4-60P-201ENST00000517239 COL7A1Q02388 2944 aa0.87□□□□□ -2.27
RNU4-60P-201ENST00000517239 ZANQ9Y493 2812 aa0.87□□□□□ -2.27
RNU4-60P-201ENST00000517239 VPS13CQ709C8 3753 aa0.87□□□□□ -2.27
RNU4-60P-201ENST00000517239 BSNQ9UPA5 3926 aa0.86□□□□□ -2.27
RNU4-60P-201ENST00000517239 TENM3Q9P273 2699 aa0.86□□□□□ -2.27
RNU4-60P-201ENST00000517239 ABCA13Q86UQ4 5058 aa0.85□□□□□ -2.27
RNU4-60P-201ENST00000517239 SONP18583 2426 aaKnown RBP0.85□□□□□ -2.27
RNU4-60P-201ENST00000517239 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
RNU4-60P-201ENST00000517239 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.28
RNU4-60P-201ENST00000517239 HERC2O95714 4834 aa0.84□□□□□ -2.28
RNU4-60P-201ENST00000517239 KRTAP4-4Q9BYR3 166 aa0.83□□□□□ -2.28
RNU4-60P-201ENST00000517239 KRTAP4-3Q9BYR4 195 aa0.83□□□□□ -2.28
RNU4-60P-201ENST00000517239 NOP10Q9NPE3 64 aaKnown RBP0.83□□□□□ -2.28
RNU4-60P-201ENST00000517239 OBSCNQ5VST9 7968 aa0.83□□□□□ -2.28
RNU4-60P-201ENST00000517239 HERC1Q15751 4861 aa0.83□□□□□ -2.28
RNU4-60P-201ENST00000517239 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
RNU4-60P-201ENST00000517239 SNRPGP62308 76 aaKnown RBP0.82□□□□□ -2.28
RNU4-60P-201ENST00000517239 DYNC2H1Q8NCM8 4307 aaKnown RBP0.82□□□□□ -2.28
RNU4-60P-201ENST00000517239 MUC2Q02817 5179 aa0.82□□□□□ -2.28
RNU4-60P-201ENST00000517239 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
RNU4-60P-201ENST00000517239 PRM1P04553 51 aa0.81□□□□□ -2.28
RNU4-60P-201ENST00000517239 DEFB131AP59861 70 aa0.81□□□□□ -2.28
RNU4-60P-201ENST00000517239 TNXBP22105 4242 aa0.81□□□□□ -2.28
RNU4-60P-201ENST00000517239 HRNRQ86YZ3 2850 aaPredicted RBP0.81□□□□□ -2.28
RNU4-60P-201ENST00000517239 SACSQ9NZJ4 4579 aa0.8□□□□□ -2.28
RNU4-60P-201ENST00000517239 TRRAPQ9Y4A5 3859 aa0.8□□□□□ -2.28
RNU4-60P-201ENST00000517239 CMYA5Q8N3K9 4069 aa0.79□□□□□ -2.28
RNU4-60P-201ENST00000517239 RNF213Q63HN8 5207 aa0.79□□□□□ -2.28
RNU4-60P-201ENST00000517239 IGLV5-48A0A075B6I7 105 aa0.79□□□□□ -2.28
RNU4-60P-201ENST00000517239 DMBT1Q9UGM3 2413 aaPredicted RBP0.78□□□□□ -2.28
RNU4-60P-201ENST00000517239 STAB2Q8WWQ8 2551 aa0.78□□□□□ -2.28
RNU4-60P-201ENST00000517239 ANK3Q12955 4377 aaKnown RBP0.78□□□□□ -2.29
RNU4-60P-201ENST00000517239 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
RNU4-60P-201ENST00000517239 KRTAP5-9P26371 169 aa0.77□□□□□ -2.29
RNU4-60P-201ENST00000517239 DEFB124Q8NES8 71 aa0.77□□□□□ -2.29
RNU4-60P-201ENST00000517239 HECTD4Q9Y4D8 3996 aa0.77□□□□□ -2.29
RNU4-60P-201ENST00000517239 MUC19Q7Z5P9 8384 aa0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 NEBP20929 6669 aa0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 SYNE2Q8WXH0 6885 aaKnown RBP0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 KMT2AQ03164 3969 aa0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 M0QY20 66 aa0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 FAT4Q6V0I7 4981 aa0.76□□□□□ -2.29
RNU4-60P-201ENST00000517239 DNAH1Q9P2D7 4330 aa0.75□□□□□ -2.29
RNU4-60P-201ENST00000517239 LYSTQ99698 3801 aa0.75□□□□□ -2.29
RNU4-60P-201ENST00000517239 FAT2Q9NYQ8 4349 aa0.73□□□□□ -2.29
RNU4-60P-201ENST00000517239 PKHD1P08F94 4074 aa0.73□□□□□ -2.29
RNU4-60P-201ENST00000517239 DNAH7Q8WXX0 4024 aa0.72□□□□□ -2.29
RNU4-60P-201ENST00000517239 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
RNU4-60P-201ENST00000517239 HSPG2P98160 4391 aa0.72□□□□□ -2.29
RNU4-60P-201ENST00000517239 SRRM2Q9UQ35 2752 aaKnown RBP0.72□□□□□ -2.29
RNU4-60P-201ENST00000517239 HMCN2Q8NDA2 5059 aa0.7□□□□□ -2.3
RNU4-60P-201ENST00000517239 H3BNG1 76 aa0.7□□□□□ -2.3
RNU4-60P-201ENST00000517239 CRCT1Q9UGL9 99 aa0.7□□□□□ -2.3
RNU4-60P-201ENST00000517239 DNAH3Q8TD57 4116 aa0.7□□□□□ -2.3
RNU4-60P-201ENST00000517239 DNAH9Q9NYC9 4486 aa0.7□□□□□ -2.3
RNU4-60P-201ENST00000517239 STARD9Q9P2P6 4700 aa0.69□□□□□ -2.3
RNU4-60P-201ENST00000517239 DNAH10Q8IVF4 4471 aa0.69□□□□□ -2.3
RNU4-60P-201ENST00000517239 HUWE1Q7Z6Z7 4374 aaKnown RBP0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 C9orf92A6NGG3 77 aa0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 KRTAP5-2Q701N4 177 aa0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 DYNC1H1Q14204 4646 aaKnown RBP0.68□□□□□ -2.3
RNU4-60P-201ENST00000517239 VPS13DQ5THJ4 4388 aa0.67□□□□□ -2.3
RNU4-60P-201ENST00000517239 A8MTW9 85 aa0.67□□□□□ -2.3
RNU4-60P-201ENST00000517239 RPL39P62891 51 aaKnown RBP0.67□□□□□ -2.3
RNU4-60P-201ENST00000517239 PKHD1L1Q86WI1 4243 aa0.67□□□□□ -2.3
RNU4-60P-201ENST00000517239 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
RNU4-60P-201ENST00000517239 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
RNU4-60P-201ENST00000517239 POLR2KP53803 58 aaKnown RBP0.66□□□□□ -2.3
RNU4-60P-201ENST00000517239 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
RNU4-60P-201ENST00000517239 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
RNU4-60P-201ENST00000517239 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.31
RNU4-60P-201ENST00000517239 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
RNU4-60P-201ENST00000517239 USH2AO75445 5202 aa0.65□□□□□ -2.31
RNU4-60P-201ENST00000517239 SPRR2DP22532 72 aa0.65□□□□□ -2.31
RNU4-60P-201ENST00000517239 LRP2P98164 4655 aa0.65□□□□□ -2.31
RNU4-60P-201ENST00000517239 DNAH2Q9P225 4427 aa0.64□□□□□ -2.31
RNU4-60P-201ENST00000517239 FAT1Q14517 4588 aa0.64□□□□□ -2.31
RNU4-60P-201ENST00000517239 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
RNU4-60P-201ENST00000517239 PKD1P98161 4303 aa0.63□□□□□ -2.31
RNU4-60P-201ENST00000517239 CLPSL2Q6UWE3 100 aa0.63□□□□□ -2.31
RNU4-60P-201ENST00000517239 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
RNU4-60P-201ENST00000517239 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 M0QZ58 72 aa0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 RPL39LQ96EH5 51 aaKnown RBP0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 KRTAP4-1Q9BYQ7 146 aa0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 LRP1Q07954 4544 aaKnown RBP0.62□□□□□ -2.31
RNU4-60P-201ENST00000517239 VPS13BQ7Z7G8 4022 aa0.61□□□□□ -2.31
RNU4-60P-201ENST00000517239 DNAH11Q96DT5 4516 aa0.61□□□□□ -2.31
RNU4-60P-201ENST00000517239 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms