RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SVEP1Q4LDE5 3571 aa4.56□□□□□ -1.68
TRIM41-209ENST00000515834 SPRR2FQ96RM1 72 aa4.49□□□□□ -1.69
TRIM41-209ENST00000515834 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
TRIM41-209ENST00000515834 MT1HP80294 61 aa4.45□□□□□ -1.7
TRIM41-209ENST00000515834 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
TRIM41-209ENST00000515834 CSMD3Q7Z407 3707 aa4.4□□□□□ -1.71
TRIM41-209ENST00000515834 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
TRIM41-209ENST00000515834 VPS13CQ709C8 3753 aa4.35□□□□□ -1.71
TRIM41-209ENST00000515834 MT2AP02795 61 aa4.33□□□□□ -1.72
TRIM41-209ENST00000515834 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
TRIM41-209ENST00000515834 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
TRIM41-209ENST00000515834 BSNQ9UPA5 3926 aa4.28□□□□□ -1.72
TRIM41-209ENST00000515834 SPRR2EP22531 72 aa4.28□□□□□ -1.72
TRIM41-209ENST00000515834 SPRR2BP35325 72 aa4.28□□□□□ -1.72
TRIM41-209ENST00000515834 SPRR2AP35326 72 aa4.28□□□□□ -1.72
TRIM41-209ENST00000515834 MT1FP04733 61 aa4.24□□□□□ -1.73
TRIM41-209ENST00000515834 DNAH9Q9NYC9 4486 aa4.24□□□□□ -1.73
TRIM41-209ENST00000515834 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
TRIM41-209ENST00000515834 DNAH2Q9P225 4427 aa4.17□□□□□ -1.74
TRIM41-209ENST00000515834 AKAP9Q99996 3911 aa4.17□□□□□ -1.74
TRIM41-209ENST00000515834 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
TRIM41-209ENST00000515834 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
TRIM41-209ENST00000515834 SPRR2DP22532 72 aa4.13□□□□□ -1.75
TRIM41-209ENST00000515834 DNAH10Q8IVF4 4471 aa4.13□□□□□ -1.75
TRIM41-209ENST00000515834 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
TRIM41-209ENST00000515834 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
TRIM41-209ENST00000515834 LCE2BO14633 110 aa4.04□□□□□ -1.76
TRIM41-209ENST00000515834 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
TRIM41-209ENST00000515834 ZNF469Q96JG9 3925 aaPredicted RBP4.01□□□□□ -1.77
TRIM41-209ENST00000515834 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
TRIM41-209ENST00000515834 DNAH11Q96DT5 4516 aa4□□□□□ -1.77
TRIM41-209ENST00000515834 FAT1Q14517 4588 aa3.99□□□□□ -1.77
TRIM41-209ENST00000515834 MT1GP13640 62 aa3.98□□□□□ -1.77
TRIM41-209ENST00000515834 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
TRIM41-209ENST00000515834 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.78
TRIM41-209ENST00000515834 VPS13BQ7Z7G8 4022 aa3.94□□□□□ -1.78
TRIM41-209ENST00000515834 LRP1BQ9NZR2 4599 aa3.93□□□□□ -1.78
TRIM41-209ENST00000515834 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
TRIM41-209ENST00000515834 ANK2Q01484 3957 aa3.9□□□□□ -1.78
TRIM41-209ENST00000515834 VPS13DQ5THJ4 4388 aa3.9□□□□□ -1.79
TRIM41-209ENST00000515834 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
TRIM41-209ENST00000515834 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
TRIM41-209ENST00000515834 DYNC1H1Q14204 4646 aaKnown RBP3.84□□□□□ -1.79
TRIM41-209ENST00000515834 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
TRIM41-209ENST00000515834 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.8
TRIM41-209ENST00000515834 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
TRIM41-209ENST00000515834 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
TRIM41-209ENST00000515834 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
TRIM41-209ENST00000515834 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
TRIM41-209ENST00000515834 SACSQ9NZJ4 4579 aa3.83□□□□□ -1.8
TRIM41-209ENST00000515834 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
TRIM41-209ENST00000515834 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
TRIM41-209ENST00000515834 MT1XP80297 61 aa3.81□□□□□ -1.8
TRIM41-209ENST00000515834 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
TRIM41-209ENST00000515834 RYR1P21817 5038 aa3.8□□□□□ -1.8
TRIM41-209ENST00000515834 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
TRIM41-209ENST00000515834 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
TRIM41-209ENST00000515834 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
TRIM41-209ENST00000515834 FRAS1Q86XX4 4008 aa3.75□□□□□ -1.81
TRIM41-209ENST00000515834 LYSTQ99698 3801 aa3.74□□□□□ -1.81
TRIM41-209ENST00000515834 MT1BP07438 61 aa3.74□□□□□ -1.81
TRIM41-209ENST00000515834 MT4P47944 62 aa3.73□□□□□ -1.81
TRIM41-209ENST00000515834 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
TRIM41-209ENST00000515834 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
TRIM41-209ENST00000515834 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
TRIM41-209ENST00000515834 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.81
TRIM41-209ENST00000515834 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
TRIM41-209ENST00000515834 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
TRIM41-209ENST00000515834 DNAH6Q9C0G6 4158 aa3.68□□□□□ -1.82
TRIM41-209ENST00000515834 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
TRIM41-209ENST00000515834 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
TRIM41-209ENST00000515834 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
TRIM41-209ENST00000515834 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
TRIM41-209ENST00000515834 RYR3Q15413 4870 aa3.6□□□□□ -1.83
TRIM41-209ENST00000515834 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
TRIM41-209ENST00000515834 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
TRIM41-209ENST00000515834 PKHD1L1Q86WI1 4243 aa3.57□□□□□ -1.84
TRIM41-209ENST00000515834 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
TRIM41-209ENST00000515834 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
TRIM41-209ENST00000515834 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
TRIM41-209ENST00000515834 MT1LQ93083 61 aa3.49□□□□□ -1.85
TRIM41-209ENST00000515834 PKD1P98161 4303 aa3.49□□□□□ -1.85
TRIM41-209ENST00000515834 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
TRIM41-209ENST00000515834 MT3P25713 68 aa3.47□□□□□ -1.85
TRIM41-209ENST00000515834 MT1EP04732 61 aa3.47□□□□□ -1.85
TRIM41-209ENST00000515834 HSPG2P98160 4391 aa3.47□□□□□ -1.85
TRIM41-209ENST00000515834 LPAP08519 4548 aa3.46□□□□□ -1.86
TRIM41-209ENST00000515834 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
TRIM41-209ENST00000515834 KRTAP9-6A0A140TA67 174 aa3.43□□□□□ -1.86
TRIM41-209ENST00000515834 PKHD1P08F94 4074 aa3.41□□□□□ -1.86
TRIM41-209ENST00000515834 MT1MQ8N339 61 aa3.41□□□□□ -1.86
TRIM41-209ENST00000515834 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
TRIM41-209ENST00000515834 PRM1P04553 51 aa3.39□□□□□ -1.87
TRIM41-209ENST00000515834 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
TRIM41-209ENST00000515834 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
TRIM41-209ENST00000515834 HERC1Q15751 4861 aa3.37□□□□□ -1.87
TRIM41-209ENST00000515834 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
TRIM41-209ENST00000515834 RYR2Q92736 4967 aa3.28□□□□□ -1.89
TRIM41-209ENST00000515834 LRP2P98164 4655 aa3.25□□□□□ -1.89
TRIM41-209ENST00000515834 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms