RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 H0YAA0 97 aa4.99□□□□□ -1.61
RAPGEF6-214ENST00000515170 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
RAPGEF6-214ENST00000515170 DNAH8Q96JB1 4490 aa4.97□□□□□ -1.61
RAPGEF6-214ENST00000515170 NDUFAF8A1L188 74 aa4.96□□□□□ -1.61
RAPGEF6-214ENST00000515170 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
RAPGEF6-214ENST00000515170 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
RAPGEF6-214ENST00000515170 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
RAPGEF6-214ENST00000515170 RYR3Q15413 4870 aa4.94□□□□□ -1.62
RAPGEF6-214ENST00000515170 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
RAPGEF6-214ENST00000515170 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
RAPGEF6-214ENST00000515170 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
RAPGEF6-214ENST00000515170 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
RAPGEF6-214ENST00000515170 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
RAPGEF6-214ENST00000515170 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
RAPGEF6-214ENST00000515170 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
RAPGEF6-214ENST00000515170 VPS13BQ7Z7G8 4022 aa4.87□□□□□ -1.63
RAPGEF6-214ENST00000515170 DYNC2H1Q8NCM8 4307 aaKnown RBP4.86□□□□□ -1.63
RAPGEF6-214ENST00000515170 SACSQ9NZJ4 4579 aa4.85□□□□□ -1.63
RAPGEF6-214ENST00000515170 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
RAPGEF6-214ENST00000515170 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
RAPGEF6-214ENST00000515170 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
RAPGEF6-214ENST00000515170 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
RAPGEF6-214ENST00000515170 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
RAPGEF6-214ENST00000515170 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
RAPGEF6-214ENST00000515170 RYR2Q92736 4967 aa4.81□□□□□ -1.64
RAPGEF6-214ENST00000515170 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
RAPGEF6-214ENST00000515170 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
RAPGEF6-214ENST00000515170 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
RAPGEF6-214ENST00000515170 TNP1P09430 55 aa4.71□□□□□ -1.66
RAPGEF6-214ENST00000515170 KRTAP13-4Q3LI77 160 aa4.7□□□□□ -1.66
RAPGEF6-214ENST00000515170 HERC2O95714 4834 aa4.7□□□□□ -1.66
RAPGEF6-214ENST00000515170 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
RAPGEF6-214ENST00000515170 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
RAPGEF6-214ENST00000515170 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
RAPGEF6-214ENST00000515170 KRTAP3-3Q9BYR6 98 aa4.67□□□□□ -1.66
RAPGEF6-214ENST00000515170 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
RAPGEF6-214ENST00000515170 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
RAPGEF6-214ENST00000515170 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
RAPGEF6-214ENST00000515170 LRP2P98164 4655 aa4.61□□□□□ -1.67
RAPGEF6-214ENST00000515170 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
RAPGEF6-214ENST00000515170 PKD1P98161 4303 aa4.56□□□□□ -1.68
RAPGEF6-214ENST00000515170 HSPG2P98160 4391 aa4.55□□□□□ -1.68
RAPGEF6-214ENST00000515170 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
RAPGEF6-214ENST00000515170 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
RAPGEF6-214ENST00000515170 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
RAPGEF6-214ENST00000515170 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
RAPGEF6-214ENST00000515170 PCLOQ9Y6V0 5065 aa4.44□□□□□ -1.7
RAPGEF6-214ENST00000515170 LPAP08519 4548 aa4.44□□□□□ -1.7
RAPGEF6-214ENST00000515170 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
RAPGEF6-214ENST00000515170 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
RAPGEF6-214ENST00000515170 HERC1Q15751 4861 aa4.36□□□□□ -1.71
RAPGEF6-214ENST00000515170 MT1HP80294 61 aa4.34□□□□□ -1.71
RAPGEF6-214ENST00000515170 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
RAPGEF6-214ENST00000515170 MUC2Q02817 5179 aa4.27□□□□□ -1.73
RAPGEF6-214ENST00000515170 MT2AP02795 61 aa4.25□□□□□ -1.73
RAPGEF6-214ENST00000515170 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
RAPGEF6-214ENST00000515170 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
RAPGEF6-214ENST00000515170 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
RAPGEF6-214ENST00000515170 MT1FP04733 61 aa4.22□□□□□ -1.73
RAPGEF6-214ENST00000515170 TNXBP22105 4242 aa4.21□□□□□ -1.74
RAPGEF6-214ENST00000515170 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
RAPGEF6-214ENST00000515170 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
RAPGEF6-214ENST00000515170 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
RAPGEF6-214ENST00000515170 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
RAPGEF6-214ENST00000515170 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
RAPGEF6-214ENST00000515170 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
RAPGEF6-214ENST00000515170 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
RAPGEF6-214ENST00000515170 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
RAPGEF6-214ENST00000515170 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
RAPGEF6-214ENST00000515170 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
RAPGEF6-214ENST00000515170 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
RAPGEF6-214ENST00000515170 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
RAPGEF6-214ENST00000515170 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
RAPGEF6-214ENST00000515170 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
RAPGEF6-214ENST00000515170 MT1BP07438 61 aa3.87□□□□□ -1.79
RAPGEF6-214ENST00000515170 KRTAP10-7P60409 375 aaPredicted RBP3.86□□□□□ -1.79
RAPGEF6-214ENST00000515170 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
RAPGEF6-214ENST00000515170 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
RAPGEF6-214ENST00000515170 MT1XP80297 61 aa3.82□□□□□ -1.8
RAPGEF6-214ENST00000515170 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
RAPGEF6-214ENST00000515170 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
RAPGEF6-214ENST00000515170 LCE2BO14633 110 aa3.8□□□□□ -1.8
RAPGEF6-214ENST00000515170 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
RAPGEF6-214ENST00000515170 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
RAPGEF6-214ENST00000515170 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
RAPGEF6-214ENST00000515170 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
RAPGEF6-214ENST00000515170 INE1O15225 51 aa3.75□□□□□ -1.81
RAPGEF6-214ENST00000515170 USH2AO75445 5202 aa3.74□□□□□ -1.81
RAPGEF6-214ENST00000515170 LCE2AQ5TA79 106 aaPredicted RBP3.69□□□□□ -1.82
RAPGEF6-214ENST00000515170 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
RAPGEF6-214ENST00000515170 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
RAPGEF6-214ENST00000515170 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
RAPGEF6-214ENST00000515170 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
RAPGEF6-214ENST00000515170 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
RAPGEF6-214ENST00000515170 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
RAPGEF6-214ENST00000515170 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
RAPGEF6-214ENST00000515170 KMT2DO14686 5537 aa3.5□□□□□ -1.85
RAPGEF6-214ENST00000515170 SPRR2EP22531 72 aa3.5□□□□□ -1.85
RAPGEF6-214ENST00000515170 SPRR2BP35325 72 aa3.5□□□□□ -1.85
RAPGEF6-214ENST00000515170 SPRR2AP35326 72 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms