RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 RYR2Q92736 4967 aa3.42□□□□□ -1.86
CALCOCO2-224ENST00000514962 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
CALCOCO2-224ENST00000514962 COX6B2Q6YFQ2 88 aa3.42□□□□□ -1.86
CALCOCO2-224ENST00000514962 NSD1Q96L73 2696 aaPredicted RBP3.42□□□□□ -1.86
CALCOCO2-224ENST00000514962 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
CALCOCO2-224ENST00000514962 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
CALCOCO2-224ENST00000514962 ANK2Q01484 3957 aa3.41□□□□□ -1.86
CALCOCO2-224ENST00000514962 RPL37P61927 97 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-224ENST00000514962 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
CALCOCO2-224ENST00000514962 SRRM2Q9UQ35 2752 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-224ENST00000514962 CRIPTQ9P021 101 aa3.38□□□□□ -1.87
CALCOCO2-224ENST00000514962 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
CALCOCO2-224ENST00000514962 HERC2O95714 4834 aa3.35□□□□□ -1.87
CALCOCO2-224ENST00000514962 DYNC2H1Q8NCM8 4307 aaKnown RBP3.34□□□□□ -1.88
CALCOCO2-224ENST00000514962 TRRAPQ9Y4A5 3859 aa3.33□□□□□ -1.88
CALCOCO2-224ENST00000514962 HUWE1Q7Z6Z7 4374 aaKnown RBP3.32□□□□□ -1.88
CALCOCO2-224ENST00000514962 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
CALCOCO2-224ENST00000514962 MUC2Q02817 5179 aa3.31□□□□□ -1.88
CALCOCO2-224ENST00000514962 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
CALCOCO2-224ENST00000514962 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
CALCOCO2-224ENST00000514962 MGAM2Q2M2H8 2515 aa3.3□□□□□ -1.88
CALCOCO2-224ENST00000514962 DNAH10Q8IVF4 4471 aa3.3□□□□□ -1.88
CALCOCO2-224ENST00000514962 LYSTQ99698 3801 aa3.29□□□□□ -1.88
CALCOCO2-224ENST00000514962 C9orf92A6NGG3 77 aa3.28□□□□□ -1.88
CALCOCO2-224ENST00000514962 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
CALCOCO2-224ENST00000514962 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
CALCOCO2-224ENST00000514962 S4R3F8 94 aa3.28□□□□□ -1.88
CALCOCO2-224ENST00000514962 DNAH8Q96JB1 4490 aa3.27□□□□□ -1.89
CALCOCO2-224ENST00000514962 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
CALCOCO2-224ENST00000514962 A0A0D9SG42 100 aa3.26□□□□□ -1.89
CALCOCO2-224ENST00000514962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-224ENST00000514962 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
CALCOCO2-224ENST00000514962 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
CALCOCO2-224ENST00000514962 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
CALCOCO2-224ENST00000514962 HERC1Q15751 4861 aa3.23□□□□□ -1.89
CALCOCO2-224ENST00000514962 PRKDCP78527 4128 aaKnown RBP3.21□□□□□ -1.89
CALCOCO2-224ENST00000514962 HECTD4Q9Y4D8 3996 aa3.21□□□□□ -1.89
CALCOCO2-224ENST00000514962 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
CALCOCO2-224ENST00000514962 R4GN34 69 aa3.21□□□□□ -1.9
CALCOCO2-224ENST00000514962 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
CALCOCO2-224ENST00000514962 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
CALCOCO2-224ENST00000514962 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
CALCOCO2-224ENST00000514962 M0QZ58 72 aa3.19□□□□□ -1.9
CALCOCO2-224ENST00000514962 ABCA13Q86UQ4 5058 aa3.19□□□□□ -1.9
CALCOCO2-224ENST00000514962 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
CALCOCO2-224ENST00000514962 FLG2Q5D862 2391 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-224ENST00000514962 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
CALCOCO2-224ENST00000514962 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.91
CALCOCO2-224ENST00000514962 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
CALCOCO2-224ENST00000514962 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
CALCOCO2-224ENST00000514962 COL7A1Q02388 2944 aa3.13□□□□□ -1.91
CALCOCO2-224ENST00000514962 PLECQ15149 4684 aaKnown RBP3.12□□□□□ -1.91
CALCOCO2-224ENST00000514962 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
CALCOCO2-224ENST00000514962 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
CALCOCO2-224ENST00000514962 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
CALCOCO2-224ENST00000514962 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
CALCOCO2-224ENST00000514962 DNAH2Q9P225 4427 aa3.09□□□□□ -1.91
CALCOCO2-224ENST00000514962 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
CALCOCO2-224ENST00000514962 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
CALCOCO2-224ENST00000514962 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
CALCOCO2-224ENST00000514962 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
CALCOCO2-224ENST00000514962 MT3P25713 68 aa3.06□□□□□ -1.92
CALCOCO2-224ENST00000514962 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
CALCOCO2-224ENST00000514962 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
CALCOCO2-224ENST00000514962 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
CALCOCO2-224ENST00000514962 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
CALCOCO2-224ENST00000514962 KMT2AQ03164 3969 aa3.01□□□□□ -1.93
CALCOCO2-224ENST00000514962 PKHD1L1Q86WI1 4243 aa2.99□□□□□ -1.93
CALCOCO2-224ENST00000514962 PKD1P98161 4303 aa2.98□□□□□ -1.93
CALCOCO2-224ENST00000514962 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
CALCOCO2-224ENST00000514962 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
CALCOCO2-224ENST00000514962 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
CALCOCO2-224ENST00000514962 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
CALCOCO2-224ENST00000514962 VPS13BQ7Z7G8 4022 aa2.94□□□□□ -1.94
CALCOCO2-224ENST00000514962 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
CALCOCO2-224ENST00000514962 INE1O15225 51 aa2.93□□□□□ -1.94
CALCOCO2-224ENST00000514962 DMBT1Q9UGM3 2413 aaPredicted RBP2.91□□□□□ -1.94
CALCOCO2-224ENST00000514962 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
CALCOCO2-224ENST00000514962 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
CALCOCO2-224ENST00000514962 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
CALCOCO2-224ENST00000514962 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
CALCOCO2-224ENST00000514962 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
CALCOCO2-224ENST00000514962 TNXBP22105 4242 aa2.86□□□□□ -1.95
CALCOCO2-224ENST00000514962 Q5VSD8 79 aa2.86□□□□□ -1.95
CALCOCO2-224ENST00000514962 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
CALCOCO2-224ENST00000514962 MT1HL1P0DM35 61 aa2.84□□□□□ -1.95
CALCOCO2-224ENST00000514962 TNP1P09430 55 aa2.83□□□□□ -1.96
CALCOCO2-224ENST00000514962 FAT1Q14517 4588 aa2.81□□□□□ -1.96
CALCOCO2-224ENST00000514962 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
CALCOCO2-224ENST00000514962 HSPG2P98160 4391 aa2.79□□□□□ -1.96
CALCOCO2-224ENST00000514962 DYNC1H1Q14204 4646 aaKnown RBP2.79□□□□□ -1.96
CALCOCO2-224ENST00000514962 MYCBP2O75592 4640 aa2.78□□□□□ -1.96
CALCOCO2-224ENST00000514962 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CALCOCO2-224ENST00000514962 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
CALCOCO2-224ENST00000514962 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
CALCOCO2-224ENST00000514962 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CALCOCO2-224ENST00000514962 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
CALCOCO2-224ENST00000514962 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
CALCOCO2-224ENST00000514962 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
CALCOCO2-224ENST00000514962 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms