RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
CDH6-205ENST00000514738 IGSF10Q6WRI0 2623 aa7.66□□□□□ -1.18
CDH6-205ENST00000514738 DNAH2Q9P225 4427 aa7.66□□□□□ -1.18
CDH6-205ENST00000514738 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
CDH6-205ENST00000514738 PRKDCP78527 4128 aaKnown RBP7.57□□□□□ -1.2
CDH6-205ENST00000514738 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
CDH6-205ENST00000514738 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
CDH6-205ENST00000514738 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
CDH6-205ENST00000514738 PLECQ15149 4684 aaKnown RBP7.41□□□□□ -1.22
CDH6-205ENST00000514738 LRP1BQ9NZR2 4599 aa7.32□□□□□ -1.24
CDH6-205ENST00000514738 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
CDH6-205ENST00000514738 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
CDH6-205ENST00000514738 PKHD1P08F94 4074 aa7.25□□□□□ -1.25
CDH6-205ENST00000514738 DNAH5Q8TE73 4624 aa7.18□□□□□ -1.26
CDH6-205ENST00000514738 Q5VSD8 79 aa7.13□□□□□ -1.27
CDH6-205ENST00000514738 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
CDH6-205ENST00000514738 LRP1Q07954 4544 aaKnown RBP7.07□□□□□ -1.28
CDH6-205ENST00000514738 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
CDH6-205ENST00000514738 STARD9Q9P2P6 4700 aa7.05□□□□□ -1.28
CDH6-205ENST00000514738 FAT2Q9NYQ8 4349 aa7.03□□□□□ -1.28
CDH6-205ENST00000514738 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
CDH6-205ENST00000514738 TNP1P09430 55 aa6.98□□□□□ -1.29
CDH6-205ENST00000514738 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
CDH6-205ENST00000514738 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
CDH6-205ENST00000514738 HSPG2P98160 4391 aa6.91□□□□□ -1.3
CDH6-205ENST00000514738 PKD1P98161 4303 aa6.89□□□□□ -1.31
CDH6-205ENST00000514738 TNXBP22105 4242 aa6.78□□□□□ -1.32
CDH6-205ENST00000514738 J3QKU1 62 aa6.77□□□□□ -1.33
CDH6-205ENST00000514738 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
CDH6-205ENST00000514738 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
CDH6-205ENST00000514738 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
CDH6-205ENST00000514738 SMR3BP02814 79 aaPredicted RBP6.62□□□□□ -1.35
CDH6-205ENST00000514738 LPAP08519 4548 aa6.6□□□□□ -1.35
CDH6-205ENST00000514738 FAT1Q14517 4588 aa6.56□□□□□ -1.36
CDH6-205ENST00000514738 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
CDH6-205ENST00000514738 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
CDH6-205ENST00000514738 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
CDH6-205ENST00000514738 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
CDH6-205ENST00000514738 HYDINQ4G0P3 5121 aa6.29□□□□□ -1.4
CDH6-205ENST00000514738 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
CDH6-205ENST00000514738 LRP2P98164 4655 aa6.23□□□□□ -1.41
CDH6-205ENST00000514738 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
CDH6-205ENST00000514738 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
CDH6-205ENST00000514738 KRTAP10-5P60370 271 aa6□□□□□ -1.45
CDH6-205ENST00000514738 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
CDH6-205ENST00000514738 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
CDH6-205ENST00000514738 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
CDH6-205ENST00000514738 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
CDH6-205ENST00000514738 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
CDH6-205ENST00000514738 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
CDH6-205ENST00000514738 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
CDH6-205ENST00000514738 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
CDH6-205ENST00000514738 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
CDH6-205ENST00000514738 HERC1Q15751 4861 aa5.76□□□□□ -1.49
CDH6-205ENST00000514738 DNHD1Q96M86 4753 aa5.75□□□□□ -1.49
CDH6-205ENST00000514738 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CDH6-205ENST00000514738 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
CDH6-205ENST00000514738 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
CDH6-205ENST00000514738 M0R2T5 61 aa5.71□□□□□ -1.49
CDH6-205ENST00000514738 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.49
CDH6-205ENST00000514738 KRTAP19-1Q8IUB9 90 aa5.64□□□□□ -1.51
CDH6-205ENST00000514738 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
CDH6-205ENST00000514738 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
CDH6-205ENST00000514738 RYR1P21817 5038 aa5.6□□□□□ -1.51
CDH6-205ENST00000514738 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
CDH6-205ENST00000514738 MUC2Q02817 5179 aa5.53□□□□□ -1.52
CDH6-205ENST00000514738 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
CDH6-205ENST00000514738 MT1XP80297 61 aa5.43□□□□□ -1.54
CDH6-205ENST00000514738 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
CDH6-205ENST00000514738 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
CDH6-205ENST00000514738 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
CDH6-205ENST00000514738 ABCA13Q86UQ4 5058 aa5.36□□□□□ -1.55
CDH6-205ENST00000514738 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
CDH6-205ENST00000514738 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
CDH6-205ENST00000514738 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
CDH6-205ENST00000514738 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
CDH6-205ENST00000514738 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.57
CDH6-205ENST00000514738 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.57
CDH6-205ENST00000514738 RYR2Q92736 4967 aa5.21□□□□□ -1.58
CDH6-205ENST00000514738 MT1BP07438 61 aa5.15□□□□□ -1.59
CDH6-205ENST00000514738 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CDH6-205ENST00000514738 PRM1P04553 51 aa5.13□□□□□ -1.59
CDH6-205ENST00000514738 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
CDH6-205ENST00000514738 HERC2O95714 4834 aa5.06□□□□□ -1.6
CDH6-205ENST00000514738 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
CDH6-205ENST00000514738 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
CDH6-205ENST00000514738 MT1FP04733 61 aa5.04□□□□□ -1.6
CDH6-205ENST00000514738 RYR3Q15413 4870 aa4.97□□□□□ -1.61
CDH6-205ENST00000514738 MT2AP02795 61 aa4.96□□□□□ -1.62
CDH6-205ENST00000514738 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
CDH6-205ENST00000514738 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
CDH6-205ENST00000514738 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
CDH6-205ENST00000514738 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
CDH6-205ENST00000514738 LCE1FQ5T754 118 aa4.88□□□□□ -1.63
CDH6-205ENST00000514738 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
CDH6-205ENST00000514738 KMT2DO14686 5537 aa4.88□□□□□ -1.63
CDH6-205ENST00000514738 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
CDH6-205ENST00000514738 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
CDH6-205ENST00000514738 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
CDH6-205ENST00000514738 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms