RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
CHD1-205ENST00000508756 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
CHD1-205ENST00000508756 ATRQ13535 2644 aa0.56□□□□□ -2.32
CHD1-205ENST00000508756 CENPEQ02224 2701 aa0.56□□□□□ -2.32
CHD1-205ENST00000508756 SETD2Q9BYW2 2564 aaPredicted RBP0.55□□□□□ -2.32
CHD1-205ENST00000508756 LRBAP50851 2863 aa0.55□□□□□ -2.32
CHD1-205ENST00000508756 ANK3Q12955 4377 aaKnown RBP0.55□□□□□ -2.32
CHD1-205ENST00000508756 LRP1Q07954 4544 aaKnown RBP0.55□□□□□ -2.32
CHD1-205ENST00000508756 A0A087WWC5 75 aa0.55□□□□□ -2.32
CHD1-205ENST00000508756 DEFB130BP0DP73 79 aa0.55□□□□□ -2.32
CHD1-205ENST00000508756 DEFB130AP0DP74 79 aa0.55□□□□□ -2.32
CHD1-205ENST00000508756 TRRAPQ9Y4A5 3859 aa0.55□□□□□ -2.32
CHD1-205ENST00000508756 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 ZANQ9Y493 2812 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 MGAM2Q2M2H8 2515 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 HTN1P15515 57 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 HTN3P15516 51 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 NOP10Q9NPE3 64 aaKnown RBP0.54□□□□□ -2.32
CHD1-205ENST00000508756 MXRA5Q9NR99 2828 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 TACC2O95359 2948 aa0.54□□□□□ -2.32
CHD1-205ENST00000508756 BIRC6Q9NR09 4857 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 NF1P21359 2839 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
CHD1-205ENST00000508756 NIPBLQ6KC79 2804 aaeCLIP0.53□□□□□ -2.32
CHD1-205ENST00000508756 A0A096LPF7 62 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 LINC01549A6NIU2 74 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 DEFB4AO15263 64 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 PRM1P04553 51 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 LINC01556Q5JQF7 62 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 RYR2Q92736 4967 aa0.53□□□□□ -2.32
CHD1-205ENST00000508756 STARD9Q9P2P6 4700 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 DNAH3Q8TD57 4116 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 K7EMI3 77 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 SFTA3P0C7M3 94 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 DEFB1P60022 68 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 GNG13Q9P2W3 67 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 HYDINQ4G0P3 5121 aa0.52□□□□□ -2.33
CHD1-205ENST00000508756 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
CHD1-205ENST00000508756 KMT2CQ8NEZ4 4911 aaKnown RBP0.52□□□□□ -2.33
CHD1-205ENST00000508756 SMIM27A0A1W2PRY6 76 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 M0QY20 66 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 FCER1GP30273 86 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 CRIP1P50238 77 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 RYR3Q15413 4870 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 ENHOQ6UWT2 76 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 WFDC10BQ8IUB3 73 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 DEFB104AQ8WTQ1 72 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 SMIM2Q9BVW6 85 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 LYSTQ99698 3801 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 NBEAL1Q6ZS30 2694 aa0.51□□□□□ -2.33
CHD1-205ENST00000508756 DNAH7Q8WXX0 4024 aa0.5□□□□□ -2.33
CHD1-205ENST00000508756 NDUFA1O15239 70 aa0.5□□□□□ -2.33
CHD1-205ENST00000508756 POLR2KP53803 58 aaKnown RBP0.5□□□□□ -2.33
CHD1-205ENST00000508756 RPL39LQ96EH5 51 aaKnown RBP0.5□□□□□ -2.33
CHD1-205ENST00000508756 EPPK1P58107 5090 aaKnown RBP0.5□□□□□ -2.33
CHD1-205ENST00000508756 RYR1P21817 5038 aa0.5□□□□□ -2.33
CHD1-205ENST00000508756 KMT2AQ03164 3969 aa0.5□□□□□ -2.33
CHD1-205ENST00000508756 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
CHD1-205ENST00000508756 DNAH9Q9NYC9 4486 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 ALMS1Q8TCU4 4167 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 TENM2Q9NT68 2774 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 STAB2Q8WWQ8 2551 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 LINC01546A6NGU7 62 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
CHD1-205ENST00000508756 CLPSL2Q6UWE3 100 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 TOMM7Q9P0U1 55 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 PCLOQ9Y6V0 5065 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 FAT2Q9NYQ8 4349 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 HERC2O95714 4834 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 DNAH6Q9C0G6 4158 aa0.49□□□□□ -2.33
CHD1-205ENST00000508756 PLECQ15149 4684 aaKnown RBP0.48□□□□□ -2.33
CHD1-205ENST00000508756 A0A096LNI7 61 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 IGIPA6NJ69 53 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 PLNP26678 52 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 RPL39P62891 51 aaKnown RBP0.48□□□□□ -2.33
CHD1-205ENST00000508756 C6orf48Q9UBA6 75 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 KIAA1109Q2LD37 5005 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 TGP01266 2768 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 COL7A1Q02388 2944 aa0.48□□□□□ -2.33
CHD1-205ENST00000508756 ABCA13Q86UQ4 5058 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 HECTD4Q9Y4D8 3996 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 ETDCA0A1B0GVM5 59 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 LINC00158P58513 81 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 RPS29P62273 56 aaKnown RBP0.47□□□□□ -2.33
CHD1-205ENST00000508756 KCNQ1DNQ9H478 68 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 DNAH1Q9P2D7 4330 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 NBEAL2Q6ZNJ1 2754 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 SACSQ9NZJ4 4579 aa0.47□□□□□ -2.33
CHD1-205ENST00000508756 DYNC2H1Q8NCM8 4307 aaKnown RBP0.47□□□□□ -2.33
CHD1-205ENST00000508756 MUC5BQ9HC84 5762 aaPredicted RBP0.46□□□□□ -2.34
CHD1-205ENST00000508756 VPS13DQ5THJ4 4388 aa0.46□□□□□ -2.34
CHD1-205ENST00000508756 DNAH5Q8TE73 4624 aa0.46□□□□□ -2.34
CHD1-205ENST00000508756 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
CHD1-205ENST00000508756 DNAH11Q96DT5 4516 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 HERC1Q15751 4861 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 H0YGX0 51 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 C3orf79P0CE67 100 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 PRLHP81277 87 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms