RNA–Protein interactions for RNA: ENST00000507321.1

SNX2-206, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-206ENST00000507321 LRRK2Q5S007 2527 aa-0.09□□□□□ -2.42
SNX2-206ENST00000507321 HERC2O95714 4834 aa-0.09□□□□□ -2.42
SNX2-206ENST00000507321 NBPF19A0A087WUL8 3843 aa-0.09□□□□□ -2.42
SNX2-206ENST00000507321 DNAH1Q9P2D7 4330 aa-0.09□□□□□ -2.42
SNX2-206ENST00000507321 FAT1Q14517 4588 aa-0.11□□□□□ -2.43
SNX2-206ENST00000507321 LAMA5O15230 3695 aa-0.11□□□□□ -2.43
SNX2-206ENST00000507321 NDUFA1O15239 70 aa-0.11□□□□□ -2.43
SNX2-206ENST00000507321 FASNP49327 2511 aaKnown RBP-0.11□□□□□ -2.43
SNX2-206ENST00000507321 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
SNX2-206ENST00000507321 ATP7AQ04656 1500 aa-0.12□□□□□ -2.43
SNX2-206ENST00000507321 UTP20O75691 2785 aaKnown RBP-0.12□□□□□ -2.43
SNX2-206ENST00000507321 TRIOO75962 3097 aa-0.12□□□□□ -2.43
SNX2-206ENST00000507321 NBEAQ8NFP9 2946 aa-0.12□□□□□ -2.43
SNX2-206ENST00000507321 EPG5Q9HCE0 2579 aa-0.12□□□□□ -2.43
SNX2-206ENST00000507321 ACACAQ13085 2346 aa-0.13□□□□□ -2.43
SNX2-206ENST00000507321 ACACBO00763 2458 aa-0.13□□□□□ -2.43
SNX2-206ENST00000507321 HYDINQ4G0P3 5121 aa-0.13□□□□□ -2.43
SNX2-206ENST00000507321 NBEAL2Q6ZNJ1 2754 aa-0.13□□□□□ -2.43
SNX2-206ENST00000507321 FAM186AA6NE01 2351 aa-0.13□□□□□ -2.43
SNX2-206ENST00000507321 RYR3Q15413 4870 aa-0.14□□□□□ -2.43
SNX2-206ENST00000507321 USH2AO75445 5202 aa-0.15□□□□□ -2.43
SNX2-206ENST00000507321 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
SNX2-206ENST00000507321 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
SNX2-206ENST00000507321 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
SNX2-206ENST00000507321 DNAH8Q96JB1 4490 aa-0.15□□□□□ -2.43
SNX2-206ENST00000507321 EPPK1P58107 5090 aaKnown RBP-0.15□□□□□ -2.43
SNX2-206ENST00000507321 KRTAP19-7Q3SYF9 63 aa-0.16□□□□□ -2.44
SNX2-206ENST00000507321 DNAH7Q8WXX0 4024 aa-0.16□□□□□ -2.44
SNX2-206ENST00000507321 MXRA5Q9NR99 2828 aa-0.17□□□□□ -2.44
SNX2-206ENST00000507321 KIAA1109Q2LD37 5005 aa-0.17□□□□□ -2.44
SNX2-206ENST00000507321 MYO18BQ8IUG5 2567 aa-0.17□□□□□ -2.44
SNX2-206ENST00000507321 ABCA13Q86UQ4 5058 aa-0.18□□□□□ -2.44
SNX2-206ENST00000507321 KRTAP20-1Q3LI63 56 aa-0.19□□□□□ -2.44
SNX2-206ENST00000507321 CLPSL2Q6UWE3 100 aa-0.19□□□□□ -2.44
SNX2-206ENST00000507321 KRTAP8-1Q8IUC2 63 aa-0.19□□□□□ -2.44
SNX2-206ENST00000507321 LAMA1P25391 3075 aa-0.19□□□□□ -2.44
SNX2-206ENST00000507321 COL6A5A8TX70 2615 aa-0.19□□□□□ -2.44
SNX2-206ENST00000507321 KRTAP19-5Q3LI72 72 aa-0.2□□□□□ -2.44
SNX2-206ENST00000507321 RIF1Q5UIP0 2472 aaKnown RBP-0.2□□□□□ -2.44
SNX2-206ENST00000507321 SAMD9LQ8IVG5 1584 aa-0.2□□□□□ -2.44
SNX2-206ENST00000507321 COL12A1Q99715 3063 aa-0.2□□□□□ -2.44
SNX2-206ENST00000507321 WDR87Q6ZQQ6 2873 aa-0.2□□□□□ -2.44
SNX2-206ENST00000507321 SPTBN5Q9NRC6 3674 aaKnown RBP-0.2□□□□□ -2.44
SNX2-206ENST00000507321 POLR2KP53803 58 aaKnown RBP-0.22□□□□□ -2.44
SNX2-206ENST00000507321 DNHD1Q96M86 4753 aa-0.22□□□□□ -2.45
SNX2-206ENST00000507321 MUC17Q685J3 4493 aa-0.23□□□□□ -2.45
SNX2-206ENST00000507321 DYNC1H1Q14204 4646 aaKnown RBP-0.23□□□□□ -2.45
SNX2-206ENST00000507321 CELSR3Q9NYQ7 3312 aa-0.24□□□□□ -2.45
SNX2-206ENST00000507321 MGAM2Q2M2H8 2515 aa-0.25□□□□□ -2.45
SNX2-206ENST00000507321 PLECQ15149 4684 aaKnown RBP-0.25□□□□□ -2.45
SNX2-206ENST00000507321 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
SNX2-206ENST00000507321 SMR3BP02814 79 aaPredicted RBP-0.27□□□□□ -2.45
SNX2-206ENST00000507321 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
SNX2-206ENST00000507321 TLN2Q9Y4G6 2542 aa-0.28□□□□□ -2.45
SNX2-206ENST00000507321 FRYQ5TBA9 3013 aa-0.29□□□□□ -2.46
SNX2-206ENST00000507321 DNAH10Q8IVF4 4471 aa-0.29□□□□□ -2.46
SNX2-206ENST00000507321 DOPEY1Q5JWR5 2465 aa-0.29□□□□□ -2.46
SNX2-206ENST00000507321 KRTAP19-8Q3LI54 63 aa-0.29□□□□□ -2.46
SNX2-206ENST00000507321 CMYA5Q8N3K9 4069 aa-0.29□□□□□ -2.46
SNX2-206ENST00000507321 TOP2AP11388 1531 aaKnown RBP-0.29□□□□□ -2.46
SNX2-206ENST00000507321 MT4P47944 62 aa-0.3□□□□□ -2.46
SNX2-206ENST00000507321 LAMA2P24043 3122 aaKnown RBP-0.3□□□□□ -2.46
SNX2-206ENST00000507321 DNAH5Q8TE73 4624 aa-0.31□□□□□ -2.46
SNX2-206ENST00000507321 DNAH17Q9UFH2 4485 aa-0.31□□□□□ -2.46
SNX2-206ENST00000507321 RELNP78509 3460 aa-0.32□□□□□ -2.46
SNX2-206ENST00000507321 SPART-AS1P0CW21 52 aa-0.32□□□□□ -2.46
SNX2-206ENST00000507321 DEFB1P60022 68 aa-0.32□□□□□ -2.46
SNX2-206ENST00000507321 LAMA3Q16787 3333 aa-0.35□□□□□ -2.46
SNX2-206ENST00000507321 ITPR1Q14643 2758 aa-0.36□□□□□ -2.47
SNX2-206ENST00000507321 USP9XQ93008 2570 aaPredicted RBP-0.37□□□□□ -2.47
SNX2-206ENST00000507321 SMG1Q96Q15 3661 aaKnown RBP-0.37□□□□□ -2.47
SNX2-206ENST00000507321 CHD7Q9P2D1 2997 aa-0.37□□□□□ -2.47
SNX2-206ENST00000507321 MT1HP80294 61 aa-0.37□□□□□ -2.47
SNX2-206ENST00000507321 NIPBLQ6KC79 2804 aaeCLIP-0.37□□□□□ -2.47
SNX2-206ENST00000507321 USP9YO00507 2555 aaPredicted RBP-0.39□□□□□ -2.47
SNX2-206ENST00000507321 ITPR3Q14573 2671 aa-0.4□□□□□ -2.47
SNX2-206ENST00000507321 ZFHX4Q86UP3 3567 aa-0.42□□□□□ -2.48
SNX2-206ENST00000507321 CSMD1Q96PZ7 3565 aa-0.42□□□□□ -2.48
SNX2-206ENST00000507321 TEX15Q9BXT5 2789 aa-0.43□□□□□ -2.48
SNX2-206ENST00000507321 C5orf42Q9H799 3197 aa-0.44□□□□□ -2.48
SNX2-206ENST00000507321 TRRAPQ9Y4A5 3859 aa-0.45□□□□□ -2.48
SNX2-206ENST00000507321 MGAQ8IWI9 3026 aa-0.45□□□□□ -2.48
SNX2-206ENST00000507321 SRCAPQ6ZRS2 3230 aa-0.45□□□□□ -2.48
SNX2-206ENST00000507321 CRYBG3Q68DQ2 2970 aa-0.46□□□□□ -2.48
SNX2-206ENST00000507321 EYSQ5T1H1 3165 aa-0.46□□□□□ -2.48
SNX2-206ENST00000507321 MROH2BQ7Z745 1585 aa-0.47□□□□□ -2.48
SNX2-206ENST00000507321 ADGRG4Q8IZF6 3080 aa-0.49□□□□□ -2.49
SNX2-206ENST00000507321 RPL39P62891 51 aaKnown RBP-0.5□□□□□ -2.49
SNX2-206ENST00000507321 DUOX1Q9NRD9 1551 aa-0.52□□□□□ -2.49
SNX2-206ENST00000507321 VPS13CQ709C8 3753 aa-0.53□□□□□ -2.49
SNX2-206ENST00000507321 LEAP2Q969E1 77 aa-0.53□□□□□ -2.49
SNX2-206ENST00000507321 DMDP11532 3685 aa-0.54□□□□□ -2.5
SNX2-206ENST00000507321 MT1EP04732 61 aa-0.54□□□□□ -2.5
SNX2-206ENST00000507321 TOMM7Q9P0U1 55 aa-0.54□□□□□ -2.5
SNX2-206ENST00000507321 CEP295Q9C0D2 2601 aa-0.54□□□□□ -2.5
SNX2-206ENST00000507321 ITPR2Q14571 2701 aa-0.55□□□□□ -2.5
SNX2-206ENST00000507321 ATMQ13315 3056 aa-0.55□□□□□ -2.5
SNX2-206ENST00000507321 DMXL2Q8TDJ6 3036 aa-0.55□□□□□ -2.5
SNX2-206ENST00000507321 MYO15AQ9UKN7 3530 aa-0.55□□□□□ -2.5
SNX2-206ENST00000507321 CSMD2Q7Z408 3487 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms