RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 LYSTQ99698 3801 aa2.87□□□□□ -1.95
PDE4D-216ENST00000507116 RYR2Q92736 4967 aa2.87□□□□□ -1.95
PDE4D-216ENST00000507116 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
PDE4D-216ENST00000507116 VPS13DQ5THJ4 4388 aa2.87□□□□□ -1.95
PDE4D-216ENST00000507116 KRTAP1-5Q9BYS1 174 aa2.87□□□□□ -1.95
PDE4D-216ENST00000507116 KMT2AQ03164 3969 aa2.86□□□□□ -1.95
PDE4D-216ENST00000507116 LCE2BO14633 110 aa2.86□□□□□ -1.95
PDE4D-216ENST00000507116 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
PDE4D-216ENST00000507116 RYR1P21817 5038 aa2.86□□□□□ -1.95
PDE4D-216ENST00000507116 KRTAP10-2P60368 255 aa2.85□□□□□ -1.95
PDE4D-216ENST00000507116 KRTAP13-2Q52LG2 175 aa2.84□□□□□ -1.95
PDE4D-216ENST00000507116 DNAH7Q8WXX0 4024 aa2.83□□□□□ -1.96
PDE4D-216ENST00000507116 BIRC6Q9NR09 4857 aa2.83□□□□□ -1.96
PDE4D-216ENST00000507116 Q5VSD8 79 aa2.83□□□□□ -1.96
PDE4D-216ENST00000507116 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
PDE4D-216ENST00000507116 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
PDE4D-216ENST00000507116 KRTAP4-5Q9BYR2 181 aa2.8□□□□□ -1.96
PDE4D-216ENST00000507116 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
PDE4D-216ENST00000507116 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
PDE4D-216ENST00000507116 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
PDE4D-216ENST00000507116 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.96
PDE4D-216ENST00000507116 PCLOQ9Y6V0 5065 aa2.77□□□□□ -1.97
PDE4D-216ENST00000507116 DYNC2H1Q8NCM8 4307 aaKnown RBP2.77□□□□□ -1.97
PDE4D-216ENST00000507116 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
PDE4D-216ENST00000507116 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
PDE4D-216ENST00000507116 HERC2O95714 4834 aa2.75□□□□□ -1.97
PDE4D-216ENST00000507116 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
PDE4D-216ENST00000507116 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
PDE4D-216ENST00000507116 LCE2AQ5TA79 106 aaPredicted RBP2.73□□□□□ -1.97
PDE4D-216ENST00000507116 DNAH2Q9P225 4427 aa2.72□□□□□ -1.97
PDE4D-216ENST00000507116 ABCA13Q86UQ4 5058 aa2.72□□□□□ -1.97
PDE4D-216ENST00000507116 FAT1Q14517 4588 aa2.72□□□□□ -1.97
PDE4D-216ENST00000507116 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
PDE4D-216ENST00000507116 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
PDE4D-216ENST00000507116 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
PDE4D-216ENST00000507116 HERC1Q15751 4861 aa2.69□□□□□ -1.98
PDE4D-216ENST00000507116 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
PDE4D-216ENST00000507116 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
PDE4D-216ENST00000507116 APOBP04114 4563 aaKnown RBP2.67□□□□□ -1.98
PDE4D-216ENST00000507116 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
PDE4D-216ENST00000507116 LCE2CQ5TA81 110 aa2.67□□□□□ -1.98
PDE4D-216ENST00000507116 FAT2Q9NYQ8 4349 aa2.66□□□□□ -1.98
PDE4D-216ENST00000507116 LORP23490 312 aaPredicted RBP2.66□□□□□ -1.98
PDE4D-216ENST00000507116 HECTD4Q9Y4D8 3996 aa2.65□□□□□ -1.98
PDE4D-216ENST00000507116 VPS13BQ7Z7G8 4022 aa2.64□□□□□ -1.99
PDE4D-216ENST00000507116 PKD1P98161 4303 aa2.64□□□□□ -1.99
PDE4D-216ENST00000507116 TNP1P09430 55 aa2.64□□□□□ -1.99
PDE4D-216ENST00000507116 HSPG2P98160 4391 aa2.63□□□□□ -1.99
PDE4D-216ENST00000507116 LRP1Q07954 4544 aaKnown RBP2.6□□□□□ -1.99
PDE4D-216ENST00000507116 FAT3Q8TDW7 4589 aa2.6□□□□□ -1.99
PDE4D-216ENST00000507116 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
PDE4D-216ENST00000507116 KRTAP10-10P60014 251 aa2.59□□□□□ -2
PDE4D-216ENST00000507116 RNF213Q63HN8 5207 aa2.58□□□□□ -2
PDE4D-216ENST00000507116 LRP2P98164 4655 aa2.55□□□□□ -2
PDE4D-216ENST00000507116 LOC100996750A0A140TA64 210 aa2.5□□□□□ -2.01
PDE4D-216ENST00000507116 KRTAP10-4P60372 401 aaPredicted RBP2.5□□□□□ -2.01
PDE4D-216ENST00000507116 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
PDE4D-216ENST00000507116 MT1HL1P0DM35 61 aa2.5□□□□□ -2.01
PDE4D-216ENST00000507116 MUC2Q02817 5179 aa2.45□□□□□ -2.02
PDE4D-216ENST00000507116 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
PDE4D-216ENST00000507116 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
PDE4D-216ENST00000507116 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
PDE4D-216ENST00000507116 LPAP08519 4548 aa2.41□□□□□ -2.02
PDE4D-216ENST00000507116 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
PDE4D-216ENST00000507116 M0R2T5 61 aa2.39□□□□□ -2.03
PDE4D-216ENST00000507116 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
PDE4D-216ENST00000507116 LCE3AQ5TA76 89 aa2.35□□□□□ -2.03
PDE4D-216ENST00000507116 TNXBP22105 4242 aa2.34□□□□□ -2.04
PDE4D-216ENST00000507116 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
PDE4D-216ENST00000507116 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
PDE4D-216ENST00000507116 KRTAP4-8Q9BYQ9 185 aa2.3□□□□□ -2.04
PDE4D-216ENST00000507116 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
PDE4D-216ENST00000507116 LCE3BQ5TA77 95 aa2.27□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP9-2Q9BYQ4 174 aa2.25□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
PDE4D-216ENST00000507116 LCE1AQ5T7P2 110 aa2.24□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP4-1Q9BYQ7 146 aa2.24□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP10-5P60370 271 aa2.22□□□□□ -2.05
PDE4D-216ENST00000507116 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
PDE4D-216ENST00000507116 KRTAP19-4Q3LI73 84 aa2.18□□□□□ -2.06
PDE4D-216ENST00000507116 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
PDE4D-216ENST00000507116 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.06
PDE4D-216ENST00000507116 MT1HP80294 61 aa2.14□□□□□ -2.07
PDE4D-216ENST00000507116 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
PDE4D-216ENST00000507116 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
PDE4D-216ENST00000507116 LCE5AQ5TCM9 118 aa2.13□□□□□ -2.07
PDE4D-216ENST00000507116 USH2AO75445 5202 aa2.13□□□□□ -2.07
PDE4D-216ENST00000507116 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
PDE4D-216ENST00000507116 KRTAP9-4Q9BYQ2 154 aa2.13□□□□□ -2.07
PDE4D-216ENST00000507116 KRTAP4-8A0A0G2JLE6 195 aa2.12□□□□□ -2.07
PDE4D-216ENST00000507116 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
PDE4D-216ENST00000507116 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
PDE4D-216ENST00000507116 LCE1DQ5T752 114 aa2.1□□□□□ -2.07
PDE4D-216ENST00000507116 MUC17Q685J3 4493 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms