RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
PDE4D-216ENST00000507116 MYT1Q01538 1121 aa11.42□□□□□ -0.58
PDE4D-216ENST00000507116 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
PDE4D-216ENST00000507116 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
PDE4D-216ENST00000507116 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-216ENST00000507116 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
PDE4D-216ENST00000507116 APLP2Q06481 763 aa10.52□□□□□ -0.72
PDE4D-216ENST00000507116 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
PDE4D-216ENST00000507116 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
PDE4D-216ENST00000507116 HRCP23327 699 aa10.19□□□□□ -0.78
PDE4D-216ENST00000507116 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
PDE4D-216ENST00000507116 FAM9AQ8IZU1 332 aaPredicted RBP10.09□□□□□ -0.79
PDE4D-216ENST00000507116 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
PDE4D-216ENST00000507116 CENPBP07199 599 aaPredicted RBP9.93□□□□□ -0.82
PDE4D-216ENST00000507116 PPARGC1BQ86YN6 1023 aaKnown RBP9.74□□□□□ -0.85
PDE4D-216ENST00000507116 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
PDE4D-216ENST00000507116 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
PDE4D-216ENST00000507116 UBE2Q2Q8WVN8 375 aa9.62□□□□□ -0.87
PDE4D-216ENST00000507116 PLEKHG5O94827 1062 aa9.6□□□□□ -0.87
PDE4D-216ENST00000507116 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
PDE4D-216ENST00000507116 NCBP3Q53F19 620 aaKnown RBP9.53□□□□□ -0.88
PDE4D-216ENST00000507116 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
PDE4D-216ENST00000507116 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
PDE4D-216ENST00000507116 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
PDE4D-216ENST00000507116 ANO8Q9HCE9 1232 aaPredicted RBP9.45□□□□□ -0.9
PDE4D-216ENST00000507116 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
PDE4D-216ENST00000507116 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-216ENST00000507116 PKNOX2Q96KN3 472 aa9.41□□□□□ -0.9
PDE4D-216ENST00000507116 NISCHQ9Y2I1 1504 aa9.4□□□□□ -0.91
PDE4D-216ENST00000507116 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.91
PDE4D-216ENST00000507116 ARXQ96QS3 562 aa9.38□□□□□ -0.91
PDE4D-216ENST00000507116 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
PDE4D-216ENST00000507116 NEFLP07196 543 aa9.26□□□□□ -0.93
PDE4D-216ENST00000507116 ERICH6BQ5W0A0 696 aa9.26□□□□□ -0.93
PDE4D-216ENST00000507116 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-216ENST00000507116 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
PDE4D-216ENST00000507116 MYT1LQ9UL68 1186 aa9.19□□□□□ -0.94
PDE4D-216ENST00000507116 PDE4CQ08493 712 aa9.17□□□□□ -0.94
PDE4D-216ENST00000507116 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
PDE4D-216ENST00000507116 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.95
PDE4D-216ENST00000507116 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
PDE4D-216ENST00000507116 PLPPR3Q6T4P5 718 aa9.12□□□□□ -0.95
PDE4D-216ENST00000507116 TSHZ2Q9NRE2 1034 aa9.1□□□□□ -0.95
PDE4D-216ENST00000507116 CLSPNQ9HAW4 1339 aa9.07□□□□□ -0.96
PDE4D-216ENST00000507116 HOMEZQ8IX15 550 aa9.05□□□□□ -0.96
PDE4D-216ENST00000507116 FGD1P98174 961 aa9.04□□□□□ -0.96
PDE4D-216ENST00000507116 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
PDE4D-216ENST00000507116 GLIPR1L2Q4G1C9 344 aa9.01□□□□□ -0.97
PDE4D-216ENST00000507116 TAF7LQ5H9L4 462 aa9.01□□□□□ -0.97
PDE4D-216ENST00000507116 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
PDE4D-216ENST00000507116 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
PDE4D-216ENST00000507116 TULP1O00294 542 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-216ENST00000507116 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
PDE4D-216ENST00000507116 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
PDE4D-216ENST00000507116 DEKP35659 375 aaKnown RBP8.97□□□□□ -0.97
PDE4D-216ENST00000507116 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-216ENST00000507116 AEBP2Q6ZN18 517 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-216ENST00000507116 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
PDE4D-216ENST00000507116 AAMPQ13685 434 aa8.93□□□□□ -0.98
PDE4D-216ENST00000507116 DIEXFQ68CQ4 756 aaKnown RBP8.92□□□□□ -0.98
PDE4D-216ENST00000507116 A0A0U1RQG5 324 aaPredicted RBP8.92□□□□□ -0.98
PDE4D-216ENST00000507116 ZMYND15Q9H091 742 aa8.9□□□□□ -0.98
PDE4D-216ENST00000507116 SUPT16HQ9Y5B9 1047 aaKnown RBP8.88□□□□□ -0.99
PDE4D-216ENST00000507116 RBM10P98175 930 aaKnown RBP8.87□□□□□ -0.99
PDE4D-216ENST00000507116 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
PDE4D-216ENST00000507116 BRD2P25440 801 aaKnown RBP8.84□□□□□ -0.99
PDE4D-216ENST00000507116 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
PDE4D-216ENST00000507116 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
PDE4D-216ENST00000507116 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
PDE4D-216ENST00000507116 VSIG10Q8N0Z9 540 aa8.81□□□□□ -1
PDE4D-216ENST00000507116 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
PDE4D-216ENST00000507116 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
PDE4D-216ENST00000507116 YTHDC1Q96MU7 727 aaKnown RBP8.78□□□□□ -1
PDE4D-216ENST00000507116 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
PDE4D-216ENST00000507116 MSH5O43196 834 aa8.76□□□□□ -1.01
PDE4D-216ENST00000507116 DHX37Q8IY37 1157 aaKnown RBP8.76□□□□□ -1.01
PDE4D-216ENST00000507116 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
PDE4D-216ENST00000507116 IL27Q8NEV9 243 aa8.75□□□□□ -1.01
PDE4D-216ENST00000507116 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
PDE4D-216ENST00000507116 HAP1P54257 671 aaPredicted RBP8.73□□□□□ -1.01
PDE4D-216ENST00000507116 PAXIP1Q6ZW49 1069 aaPredicted RBP8.73□□□□□ -1.01
PDE4D-216ENST00000507116 NAP1L5Q96NT1 182 aaPredicted RBP8.72□□□□□ -1.01
PDE4D-216ENST00000507116 SAMD1Q6SPF0 538 aaPredicted RBP8.72□□□□□ -1.01
PDE4D-216ENST00000507116 DCAF8L2P0C7V8 631 aa8.71□□□□□ -1.01
PDE4D-216ENST00000507116 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
PDE4D-216ENST00000507116 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
PDE4D-216ENST00000507116 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
PDE4D-216ENST00000507116 FBXO3Q9UK99 471 aa8.67□□□□□ -1.02
PDE4D-216ENST00000507116 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
PDE4D-216ENST00000507116 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.03
PDE4D-216ENST00000507116 CNKSR2Q8WXI2 1034 aa8.64□□□□□ -1.03
PDE4D-216ENST00000507116 ABCC9O60706 1549 aa8.64□□□□□ -1.03
PDE4D-216ENST00000507116 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
PDE4D-216ENST00000507116 BCCIPQ9P287 314 aaKnown RBP eCLIP8.61□□□□□ -1.03
PDE4D-216ENST00000507116 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
PDE4D-216ENST00000507116 CDK11BP21127 795 aaKnown RBP8.6□□□□□ -1.03
PDE4D-216ENST00000507116 HSP90B1P14625 803 aaKnown RBP8.59□□□□□ -1.03
PDE4D-216ENST00000507116 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
PDE4D-216ENST00000507116 IPO4Q8TEX9 1081 aaKnown RBP8.57□□□□□ -1.04
PDE4D-216ENST00000507116 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms