RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SRCAPQ6ZRS2 3230 aa-0.91□□□□□ -2.55
CHD1-203ENST00000505657 DNAH10Q8IVF4 4471 aa-0.91□□□□□ -2.55
CHD1-203ENST00000505657 ITPR1Q14643 2758 aa-0.91□□□□□ -2.56
CHD1-203ENST00000505657 CLASP1Q7Z460 1538 aa-0.92□□□□□ -2.56
CHD1-203ENST00000505657 TNP1P09430 55 aa-0.92□□□□□ -2.56
CHD1-203ENST00000505657 DEFB1P60022 68 aa-0.92□□□□□ -2.56
CHD1-203ENST00000505657 CSMD1Q96PZ7 3565 aa-0.93□□□□□ -2.56
CHD1-203ENST00000505657 LINC01549A6NIU2 74 aa-0.93□□□□□ -2.56
CHD1-203ENST00000505657 NOP10Q9NPE3 64 aaKnown RBP-0.93□□□□□ -2.56
CHD1-203ENST00000505657 TRRAPQ9Y4A5 3859 aa-0.93□□□□□ -2.56
CHD1-203ENST00000505657 DNAH5Q8TE73 4624 aa-0.94□□□□□ -2.56
CHD1-203ENST00000505657 SMR3BP02814 79 aaPredicted RBP-0.95□□□□□ -2.56
CHD1-203ENST00000505657 TIAM1Q13009 1591 aa-0.96□□□□□ -2.56
CHD1-203ENST00000505657 CCDC180Q9P1Z9 1646 aa-0.96□□□□□ -2.56
CHD1-203ENST00000505657 ALS2Q96Q42 1657 aa-0.96□□□□□ -2.56
CHD1-203ENST00000505657 CLPSL2Q6UWE3 100 aa-0.96□□□□□ -2.56
CHD1-203ENST00000505657 ABCA6Q8N139 1617 aa-0.97□□□□□ -2.56
CHD1-203ENST00000505657 KRTAP8-1Q8IUC2 63 aa-0.97□□□□□ -2.56
CHD1-203ENST00000505657 SPTAN1Q13813 2472 aaKnown RBP-0.97□□□□□ -2.57
CHD1-203ENST00000505657 MT1XP80297 61 aa-0.98□□□□□ -2.57
CHD1-203ENST00000505657 FAM208AQ9UK61 1670 aaKnown RBP-0.99□□□□□ -2.57
CHD1-203ENST00000505657 M0R1W7 72 aa-0.99□□□□□ -2.57
CHD1-203ENST00000505657 SMG1Q96Q15 3661 aaKnown RBP-0.99□□□□□ -2.57
CHD1-203ENST00000505657 EFCAB5A4FU69 1503 aa-0.99□□□□□ -2.57
CHD1-203ENST00000505657 ADGRG4Q8IZF6 3080 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 MAST1Q9Y2H9 1570 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 LRBAP50851 2863 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 K7EMI3 77 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 KRTAP19-6Q3LI70 58 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 CHD7Q9P2D1 2997 aa-1□□□□□ -2.57
CHD1-203ENST00000505657 GLI2P10070 1586 aa-1.01□□□□□ -2.57
CHD1-203ENST00000505657 MYO9AB2RTY4 2548 aa-1.02□□□□□ -2.57
CHD1-203ENST00000505657 MT1EP04732 61 aa-1.03□□□□□ -2.57
CHD1-203ENST00000505657 M0QY20 66 aa-1.04□□□□□ -2.58
CHD1-203ENST00000505657 EYSQ5T1H1 3165 aa-1.04□□□□□ -2.58
CHD1-203ENST00000505657 MGAQ8IWI9 3026 aa-1.05□□□□□ -2.58
CHD1-203ENST00000505657 ABRACLQ9P1F3 81 aa-1.05□□□□□ -2.58
CHD1-203ENST00000505657 EEA1Q15075 1411 aa-1.06□□□□□ -2.58
CHD1-203ENST00000505657 KAAG1Q9UBP8 84 aa-1.06□□□□□ -2.58
CHD1-203ENST00000505657 ITPR2Q14571 2701 aa-1.07□□□□□ -2.58
CHD1-203ENST00000505657 MT1LQ93083 61 aa-1.07□□□□□ -2.58
CHD1-203ENST00000505657 SERF2P84101 59 aa-1.08□□□□□ -2.58
CHD1-203ENST00000505657 NMES1Q9C002 83 aa-1.08□□□□□ -2.58
CHD1-203ENST00000505657 LINC00308Q8TCZ7 52 aa-1.09□□□□□ -2.58
CHD1-203ENST00000505657 TMEM167BQ9NRX6 74 aa-1.09□□□□□ -2.58
CHD1-203ENST00000505657 CEP295Q9C0D2 2601 aa-1.09□□□□□ -2.58
CHD1-203ENST00000505657 UGGT1Q9NYU2 1555 aa-1.09□□□□□ -2.58
CHD1-203ENST00000505657 CSMD2Q7Z408 3487 aa-1.09□□□□□ -2.58
CHD1-203ENST00000505657 EFCAB6Q5THR3 1501 aa-1.1□□□□□ -2.58
CHD1-203ENST00000505657 PREX2Q70Z35 1606 aa-1.1□□□□□ -2.59
CHD1-203ENST00000505657 M0QZ58 72 aa-1.11□□□□□ -2.59
CHD1-203ENST00000505657 SMIM27A0A1W2PRY6 76 aa-1.12□□□□□ -2.59
CHD1-203ENST00000505657 ZFHX4Q86UP3 3567 aa-1.12□□□□□ -2.59
CHD1-203ENST00000505657 A0A087WWC5 75 aa-1.13□□□□□ -2.59
CHD1-203ENST00000505657 IGIPA6NJ69 53 aa-1.13□□□□□ -2.59
CHD1-203ENST00000505657 MT1HL1P0DM35 61 aa-1.13□□□□□ -2.59
CHD1-203ENST00000505657 CFAP46Q8IYW2 2715 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 ABCA10Q8WWZ4 1543 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 MYO15AQ9UKN7 3530 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 A8MTW9 85 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 WFDC10BQ8IUB3 73 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 LMO7Q8WWI1 1683 aa-1.14□□□□□ -2.59
CHD1-203ENST00000505657 KIF21BO75037 1637 aa-1.15□□□□□ -2.59
CHD1-203ENST00000505657 CPS1P31327 1500 aa-1.17□□□□□ -2.6
CHD1-203ENST00000505657 VPS13CQ709C8 3753 aa-1.17□□□□□ -2.6
CHD1-203ENST00000505657 LINC01546A6NGU7 62 aa-1.18□□□□□ -2.6
CHD1-203ENST00000505657 MT1BP07438 61 aa-1.19□□□□□ -2.6
CHD1-203ENST00000505657 S100ZQ8WXG8 99 aa-1.19□□□□□ -2.6
CHD1-203ENST00000505657 MT1GP13640 62 aa-1.2□□□□□ -2.6
CHD1-203ENST00000505657 MROH2AA6NES4 1674 aa-1.2□□□□□ -2.6
CHD1-203ENST00000505657 DMXL2Q8TDJ6 3036 aa-1.21□□□□□ -2.6
CHD1-203ENST00000505657 SPART-AS1P0CW21 52 aa-1.21□□□□□ -2.6
CHD1-203ENST00000505657 H0YGX0 51 aa-1.22□□□□□ -2.6
CHD1-203ENST00000505657 MT1MQ8N339 61 aa-1.22□□□□□ -2.6
CHD1-203ENST00000505657 TLN1Q9Y490 2541 aaKnown RBP-1.23□□□□□ -2.61
CHD1-203ENST00000505657 DDX60Q8IY21 1712 aaKnown RBP-1.23□□□□□ -2.61
CHD1-203ENST00000505657 PRXQ9BXM0 1461 aa-1.24□□□□□ -2.61
CHD1-203ENST00000505657 MT2AP02795 61 aa-1.24□□□□□ -2.61
CHD1-203ENST00000505657 SMIM5Q71RC9 77 aa-1.25□□□□□ -2.61
CHD1-203ENST00000505657 AGLP35573 1532 aa-1.25□□□□□ -2.61
CHD1-203ENST00000505657 ATMQ13315 3056 aa-1.29□□□□□ -2.62
CHD1-203ENST00000505657 BOD1L1Q8NFC6 3051 aa-1.29□□□□□ -2.62
CHD1-203ENST00000505657 CRYBG3Q68DQ2 2970 aa-1.29□□□□□ -2.62
CHD1-203ENST00000505657 SYCP2Q9BX26 1530 aa-1.29□□□□□ -2.62
CHD1-203ENST00000505657 ABCA5Q8WWZ7 1642 aa-1.29□□□□□ -2.62
CHD1-203ENST00000505657 TFF3Q07654 80 aa-1.3□□□□□ -2.62
CHD1-203ENST00000505657 CFAP54Q96N23 3096 aa-1.3□□□□□ -2.62
CHD1-203ENST00000505657 PRUNE2Q8WUY3 3088 aa-1.31□□□□□ -2.62
CHD1-203ENST00000505657 FREM2Q5SZK8 3169 aa-1.31□□□□□ -2.62
CHD1-203ENST00000505657 IQGAP1P46940 1657 aa-1.32□□□□□ -2.62
CHD1-203ENST00000505657 PLNP26678 52 aa-1.33□□□□□ -2.62
CHD1-203ENST00000505657 POLR2KP53803 58 aaKnown RBP-1.33□□□□□ -2.62
CHD1-203ENST00000505657 NRXN3Q9Y4C0 1643 aa-1.33□□□□□ -2.62
CHD1-203ENST00000505657 DEFB131AP59861 70 aa-1.34□□□□□ -2.62
CHD1-203ENST00000505657 CENPEQ02224 2701 aa-1.35□□□□□ -2.63
CHD1-203ENST00000505657 DEFB4AO15263 64 aa-1.35□□□□□ -2.63
CHD1-203ENST00000505657 SMIM31A0A1B0GVY4 71 aa-1.36□□□□□ -2.63
CHD1-203ENST00000505657 LEAP2Q969E1 77 aa-1.36□□□□□ -2.63
CHD1-203ENST00000505657 ADCY10Q96PN6 1610 aa-1.38□□□□□ -2.63
CHD1-203ENST00000505657 WDFY3Q8IZQ1 3526 aa-1.39□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms