RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 MT1HL1P0DM35 61 aa10.21□□□□□ -0.78
SDHA-206ENST00000505555 XP32Q5T750 250 aa10.2□□□□□ -0.78
SDHA-206ENST00000505555 COX6B2Q6YFQ2 88 aa10.2□□□□□ -0.78
SDHA-206ENST00000505555 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
SDHA-206ENST00000505555 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
SDHA-206ENST00000505555 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
SDHA-206ENST00000505555 H0YAA0 97 aa10.01□□□□□ -0.81
SDHA-206ENST00000505555 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
SDHA-206ENST00000505555 LPAP08519 4548 aa9.99□□□□□ -0.81
SDHA-206ENST00000505555 A0A1B0GU33 70 aa9.98□□□□□ -0.81
SDHA-206ENST00000505555 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
SDHA-206ENST00000505555 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
SDHA-206ENST00000505555 LRP2P98164 4655 aa9.96□□□□□ -0.82
SDHA-206ENST00000505555 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
SDHA-206ENST00000505555 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
SDHA-206ENST00000505555 S4R3F8 94 aa9.87□□□□□ -0.83
SDHA-206ENST00000505555 TPRXLQ17RH7 258 aa9.86□□□□□ -0.83
SDHA-206ENST00000505555 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
SDHA-206ENST00000505555 CSAG1Q6PB30 78 aa9.77□□□□□ -0.85
SDHA-206ENST00000505555 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
SDHA-206ENST00000505555 HERC2O95714 4834 aa9.74□□□□□ -0.85
SDHA-206ENST00000505555 LINC01554Q52M75 96 aa9.73□□□□□ -0.85
SDHA-206ENST00000505555 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
SDHA-206ENST00000505555 P0C880 135 aa9.66□□□□□ -0.86
SDHA-206ENST00000505555 A0A0D9SG42 100 aa9.59□□□□□ -0.87
SDHA-206ENST00000505555 J3QL48 77 aa9.59□□□□□ -0.87
SDHA-206ENST00000505555 K7ERS5 55 aa9.58□□□□□ -0.88
SDHA-206ENST00000505555 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
SDHA-206ENST00000505555 MUC17Q685J3 4493 aa9.52□□□□□ -0.88
SDHA-206ENST00000505555 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
SDHA-206ENST00000505555 KRTAP4-1Q9BYQ7 146 aa9.47□□□□□ -0.89
SDHA-206ENST00000505555 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
SDHA-206ENST00000505555 ROMO1P60602 79 aa9.41□□□□□ -0.9
SDHA-206ENST00000505555 CRIPTQ9P021 101 aa9.37□□□□□ -0.91
SDHA-206ENST00000505555 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
SDHA-206ENST00000505555 MUC2Q02817 5179 aa9.29□□□□□ -0.92
SDHA-206ENST00000505555 SPINT4Q6UDR6 99 aa9.28□□□□□ -0.92
SDHA-206ENST00000505555 M0QZ58 72 aa9.27□□□□□ -0.93
SDHA-206ENST00000505555 KRTAP12-1P59990 96 aa9.27□□□□□ -0.93
SDHA-206ENST00000505555 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
SDHA-206ENST00000505555 HERC1Q15751 4861 aa9.23□□□□□ -0.93
SDHA-206ENST00000505555 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
SDHA-206ENST00000505555 R4GN34 69 aa9.15□□□□□ -0.94
SDHA-206ENST00000505555 HMCN2Q8NDA2 5059 aa9.09□□□□□ -0.95
SDHA-206ENST00000505555 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
SDHA-206ENST00000505555 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
SDHA-206ENST00000505555 FAT4Q6V0I7 4981 aa8.83□□□□□ -1
SDHA-206ENST00000505555 LCE2CQ5TA81 110 aa8.78□□□□□ -1
SDHA-206ENST00000505555 H3BS24 57 aa8.76□□□□□ -1.01
SDHA-206ENST00000505555 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
SDHA-206ENST00000505555 KRTAP15-1Q3LI76 137 aa8.73□□□□□ -1.01
SDHA-206ENST00000505555 UBR4Q5T4S7 5183 aa8.73□□□□□ -1.01
SDHA-206ENST00000505555 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
SDHA-206ENST00000505555 M0R2T5 61 aa8.58□□□□□ -1.04
SDHA-206ENST00000505555 MT1HP80294 61 aa8.56□□□□□ -1.04
SDHA-206ENST00000505555 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
SDHA-206ENST00000505555 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
SDHA-206ENST00000505555 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
SDHA-206ENST00000505555 MT1FP04733 61 aa8.37□□□□□ -1.07
SDHA-206ENST00000505555 MT2AP02795 61 aa8.37□□□□□ -1.07
SDHA-206ENST00000505555 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
SDHA-206ENST00000505555 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
SDHA-206ENST00000505555 KRTAP9-8Q9BYQ0 159 aa8.33□□□□□ -1.08
SDHA-206ENST00000505555 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
SDHA-206ENST00000505555 TNP1P09430 55 aa8.28□□□□□ -1.08
SDHA-206ENST00000505555 KRTAP23-1A1A580 65 aa8.14□□□□□ -1.11
SDHA-206ENST00000505555 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
SDHA-206ENST00000505555 MT1BP07438 61 aa8.03□□□□□ -1.12
SDHA-206ENST00000505555 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
SDHA-206ENST00000505555 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
SDHA-206ENST00000505555 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
SDHA-206ENST00000505555 MT1XP80297 61 aa7.92□□□□□ -1.14
SDHA-206ENST00000505555 LUZP6Q538Z0 58 aa7.87□□□□□ -1.15
SDHA-206ENST00000505555 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
SDHA-206ENST00000505555 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
SDHA-206ENST00000505555 LCE2BO14633 110 aa7.72□□□□□ -1.17
SDHA-206ENST00000505555 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
SDHA-206ENST00000505555 USH2AO75445 5202 aa7.68□□□□□ -1.18
SDHA-206ENST00000505555 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
SDHA-206ENST00000505555 KRTAP10-12P60413 245 aa7.67□□□□□ -1.18
SDHA-206ENST00000505555 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
SDHA-206ENST00000505555 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
SDHA-206ENST00000505555 KRTAP12-3P60328 96 aa7.54□□□□□ -1.2
SDHA-206ENST00000505555 KMT2DO14686 5537 aa7.44□□□□□ -1.22
SDHA-206ENST00000505555 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
SDHA-206ENST00000505555 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
SDHA-206ENST00000505555 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
SDHA-206ENST00000505555 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
SDHA-206ENST00000505555 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
SDHA-206ENST00000505555 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
SDHA-206ENST00000505555 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
SDHA-206ENST00000505555 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
SDHA-206ENST00000505555 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
SDHA-206ENST00000505555 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
SDHA-206ENST00000505555 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
SDHA-206ENST00000505555 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.3
SDHA-206ENST00000505555 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
SDHA-206ENST00000505555 MT1EP04732 61 aa6.86□□□□□ -1.31
SDHA-206ENST00000505555 KRTAP9-6A8MVA2 160 aa6.85□□□□□ -1.31
SDHA-206ENST00000505555 MT1LQ93083 61 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms