RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 AHNAK2Q8IVF2 5795 aa0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 RANBP2P49792 3224 aaKnown RBP0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 ARHGAP5-AS1Q96IT6 56 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 KMT2DO14686 5537 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 DNAH11Q96DT5 4516 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 TLN2Q9Y4G6 2542 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 SMR3BP02814 79 aaPredicted RBP0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 DEFB104AQ8WTQ1 72 aa0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 DNAH2Q9P225 4427 aa0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 APOBP04114 4563 aaKnown RBP0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 MDN1Q9NU22 5596 aa0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 KALRNO60229 2985 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 HTTP42858 3142 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 FAT3Q8TDW7 4589 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 TRIOO75962 3097 aa0.09□□□□□ -2.39
HMGB1P22-201ENST00000505315 LAMA1P25391 3075 aa0.09□□□□□ -2.4
HMGB1P22-201ENST00000505315 COL12A1Q99715 3063 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP19-7Q3SYF9 63 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 USP9XQ93008 2570 aaPredicted RBP0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 MXRA5Q9NR99 2828 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 LAMA5O15230 3695 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
HMGB1P22-201ENST00000505315 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
HMGB1P22-201ENST00000505315 DNAH6Q9C0G6 4158 aa0.05□□□□□ -2.4
HMGB1P22-201ENST00000505315 USP9YO00507 2555 aaPredicted RBP0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 VPS13DQ5THJ4 4388 aa0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP19-8Q3LI54 63 aa0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 SSPOA2VEC9 5147 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 CELSR3Q9NYQ7 3312 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 RHPN1-AS1Q9BWJ2 59 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 TTTY10Q9BZA0 68 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 FAT1Q14517 4588 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 HERC1Q15751 4861 aa0□□□□□ -2.41
HMGB1P22-201ENST00000505315 PRCDQ00LT1 54 aa0□□□□□ -2.41
HMGB1P22-201ENST00000505315 PCLOQ9Y6V0 5065 aa-0□□□□□ -2.41
HMGB1P22-201ENST00000505315 DNAH1Q9P2D7 4330 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MT1HP80294 61 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DEFB136Q30KP8 78 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MACF1Q9UPN3 7388 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 SPENQ96T58 3664 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 A0A096LNI7 61 aa-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
HMGB1P22-201ENST00000505315 FRYQ5TBA9 3013 aa-0.03□□□□□ -2.41
HMGB1P22-201ENST00000505315 H3BSH0 61 aa-0.04□□□□□ -2.42
HMGB1P22-201ENST00000505315 CHD7Q9P2D1 2997 aa-0.05□□□□□ -2.42
HMGB1P22-201ENST00000505315 DNAH7Q8WXX0 4024 aa-0.05□□□□□ -2.42
HMGB1P22-201ENST00000505315 ITPR1Q14643 2758 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 SPTBN5Q9NRC6 3674 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 ITPR3Q14573 2671 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 NBPF19A0A087WUL8 3843 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 K7EIM0 57 aa-0.07□□□□□ -2.42
HMGB1P22-201ENST00000505315 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P22-201ENST00000505315 HTN1P15515 57 aa-0.09□□□□□ -2.42
HMGB1P22-201ENST00000505315 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P22-201ENST00000505315 MUC17Q685J3 4493 aa-0.1□□□□□ -2.43
HMGB1P22-201ENST00000505315 PLECQ15149 4684 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P22-201ENST00000505315 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1EP04732 61 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 DNAH10Q8IVF4 4471 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 ADGRG4Q8IZF6 3080 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 ZFHX4Q86UP3 3567 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 DEFB4AO15263 64 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 C5orf42Q9H799 3197 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 MGAQ8IWI9 3026 aa-0.13□□□□□ -2.43
HMGB1P22-201ENST00000505315 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
HMGB1P22-201ENST00000505315 DEFB133Q30KQ1 61 aa-0.14□□□□□ -2.43
HMGB1P22-201ENST00000505315 CMYA5Q8N3K9 4069 aa-0.14□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1XP80297 61 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1LQ93083 61 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 CEP250Q9BV73 2442 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 H3BUX3 64 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 CSMD1Q96PZ7 3565 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 RELNP78509 3460 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 USH2AO75445 5202 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 MYO9AB2RTY4 2548 aa-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 RYR1P21817 5038 aa-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 DYNC1H1Q14204 4646 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 KRTAP20-2Q3LI61 65 aa-0.18□□□□□ -2.44
HMGB1P22-201ENST00000505315 TMEM167AQ8TBQ9 72 aa-0.18□□□□□ -2.44
HMGB1P22-201ENST00000505315 DNAH17Q9UFH2 4485 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 LAMA3Q16787 3333 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 HERC2O95714 4834 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 CFAP46Q8IYW2 2715 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 TEX15Q9BXT5 2789 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 RYR3Q15413 4870 aa-0.2□□□□□ -2.44
HMGB1P22-201ENST00000505315 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
HMGB1P22-201ENST00000505315 LRBAP50851 2863 aa-0.21□□□□□ -2.44
HMGB1P22-201ENST00000505315 DEFB124Q8NES8 71 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms