RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
GYPA-203ENST00000503627 TEP1Q99973 2627 aaKnown RBP0.14□□□□□ -2.39
GYPA-203ENST00000503627 DNAH6Q9C0G6 4158 aa0.13□□□□□ -2.39
GYPA-203ENST00000503627 NBEAL1Q6ZS30 2694 aa0.12□□□□□ -2.39
GYPA-203ENST00000503627 DNAH2Q9P225 4427 aa0.12□□□□□ -2.39
GYPA-203ENST00000503627 TRIOO75962 3097 aa0.12□□□□□ -2.39
GYPA-203ENST00000503627 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
GYPA-203ENST00000503627 APOBP04114 4563 aaKnown RBP0.12□□□□□ -2.39
GYPA-203ENST00000503627 MACF1Q9UPN3 7388 aaKnown RBP0.12□□□□□ -2.39
GYPA-203ENST00000503627 RIF1Q5UIP0 2472 aaKnown RBP0.11□□□□□ -2.39
GYPA-203ENST00000503627 KRTAP8-1Q8IUC2 63 aa0.11□□□□□ -2.39
GYPA-203ENST00000503627 RPL39LQ96EH5 51 aaKnown RBP0.11□□□□□ -2.39
GYPA-203ENST00000503627 COL12A1Q99715 3063 aa0.1□□□□□ -2.39
GYPA-203ENST00000503627 MYO18BQ8IUG5 2567 aa0.09□□□□□ -2.39
GYPA-203ENST00000503627 EPG5Q9HCE0 2579 aa0.09□□□□□ -2.39
GYPA-203ENST00000503627 CCDC168Q8NDH2 2452 aa0.09□□□□□ -2.4
GYPA-203ENST00000503627 NBPF19A0A087WUL8 3843 aa0.09□□□□□ -2.4
GYPA-203ENST00000503627 DYNC2H1Q8NCM8 4307 aaKnown RBP0.09□□□□□ -2.4
GYPA-203ENST00000503627 CELSR3Q9NYQ7 3312 aa0.08□□□□□ -2.4
GYPA-203ENST00000503627 FRYQ5TBA9 3013 aa0.07□□□□□ -2.4
GYPA-203ENST00000503627 LAMA1P25391 3075 aa0.07□□□□□ -2.4
GYPA-203ENST00000503627 STAB2Q8WWQ8 2551 aa0.07□□□□□ -2.4
GYPA-203ENST00000503627 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
GYPA-203ENST00000503627 MXRA5Q9NR99 2828 aa0.06□□□□□ -2.4
GYPA-203ENST00000503627 DNAH7Q8WXX0 4024 aa0.06□□□□□ -2.4
GYPA-203ENST00000503627 LEAP2Q969E1 77 aa0.06□□□□□ -2.4
GYPA-203ENST00000503627 WDR87Q6ZQQ6 2873 aa0.06□□□□□ -2.4
GYPA-203ENST00000503627 SMR3BP02814 79 aaPredicted RBP0.05□□□□□ -2.4
GYPA-203ENST00000503627 DEFB1P60022 68 aa0.05□□□□□ -2.4
GYPA-203ENST00000503627 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
GYPA-203ENST00000503627 SPTBN5Q9NRC6 3674 aaKnown RBP0.05□□□□□ -2.4
GYPA-203ENST00000503627 TLN2Q9Y4G6 2542 aa0.04□□□□□ -2.4
GYPA-203ENST00000503627 MGAM2Q2M2H8 2515 aa0.04□□□□□ -2.4
GYPA-203ENST00000503627 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
GYPA-203ENST00000503627 CHD7Q9P2D1 2997 aa0.03□□□□□ -2.4
GYPA-203ENST00000503627 DNAH1Q9P2D7 4330 aa0.02□□□□□ -2.41
GYPA-203ENST00000503627 VPS13DQ5THJ4 4388 aa0.02□□□□□ -2.41
GYPA-203ENST00000503627 FAT1Q14517 4588 aa0.01□□□□□ -2.41
GYPA-203ENST00000503627 USP9YO00507 2555 aaPredicted RBP0□□□□□ -2.41
GYPA-203ENST00000503627 ZFHX4Q86UP3 3567 aa-0.01□□□□□ -2.41
GYPA-203ENST00000503627 ITPR3Q14573 2671 aa-0.02□□□□□ -2.41
GYPA-203ENST00000503627 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
GYPA-203ENST00000503627 KRTAP6-1Q3LI64 71 aa-0.03□□□□□ -2.41
GYPA-203ENST00000503627 ITPR1Q14643 2758 aa-0.04□□□□□ -2.42
GYPA-203ENST00000503627 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
GYPA-203ENST00000503627 USP9XQ93008 2570 aaPredicted RBP-0.05□□□□□ -2.42
GYPA-203ENST00000503627 DNAH8Q96JB1 4490 aa-0.06□□□□□ -2.42
GYPA-203ENST00000503627 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
GYPA-203ENST00000503627 LINC01590Q5TEZ4 76 aa-0.06□□□□□ -2.42
GYPA-203ENST00000503627 PCLOQ9Y6V0 5065 aa-0.07□□□□□ -2.42
GYPA-203ENST00000503627 DSTQ03001 7570 aaKnown RBP-0.1□□□□□ -2.43
GYPA-203ENST00000503627 MGAQ8IWI9 3026 aa-0.11□□□□□ -2.43
GYPA-203ENST00000503627 MT1HP80294 61 aa-0.11□□□□□ -2.43
GYPA-203ENST00000503627 DEFB104AQ8WTQ1 72 aa-0.11□□□□□ -2.43
GYPA-203ENST00000503627 HERC1Q15751 4861 aa-0.12□□□□□ -2.43
GYPA-203ENST00000503627 ARHGAP5-AS1Q96IT6 56 aa-0.12□□□□□ -2.43
GYPA-203ENST00000503627 ADGRG4Q8IZF6 3080 aa-0.12□□□□□ -2.43
GYPA-203ENST00000503627 RELNP78509 3460 aa-0.12□□□□□ -2.43
GYPA-203ENST00000503627 CSMD1Q96PZ7 3565 aa-0.12□□□□□ -2.43
GYPA-203ENST00000503627 CMYA5Q8N3K9 4069 aa-0.13□□□□□ -2.43
GYPA-203ENST00000503627 DNAH10Q8IVF4 4471 aa-0.13□□□□□ -2.43
GYPA-203ENST00000503627 C5orf42Q9H799 3197 aa-0.14□□□□□ -2.43
GYPA-203ENST00000503627 STARD9Q9P2P6 4700 aa-0.16□□□□□ -2.43
GYPA-203ENST00000503627 LAMA3Q16787 3333 aa-0.17□□□□□ -2.44
GYPA-203ENST00000503627 SPTAN1Q13813 2472 aaKnown RBP-0.17□□□□□ -2.44
GYPA-203ENST00000503627 KMT2CQ8NEZ4 4911 aaKnown RBP-0.18□□□□□ -2.44
GYPA-203ENST00000503627 DEFB136Q30KP8 78 aa-0.19□□□□□ -2.44
GYPA-203ENST00000503627 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
GYPA-203ENST00000503627 PLECQ15149 4684 aaKnown RBP-0.2□□□□□ -2.44
GYPA-203ENST00000503627 RHPN1-AS1Q9BWJ2 59 aa-0.21□□□□□ -2.44
GYPA-203ENST00000503627 UBR4Q5T4S7 5183 aa-0.21□□□□□ -2.44
GYPA-203ENST00000503627 SRCAPQ6ZRS2 3230 aa-0.22□□□□□ -2.44
GYPA-203ENST00000503627 MT1EP04732 61 aa-0.22□□□□□ -2.44
GYPA-203ENST00000503627 MUC12Q9UKN1 5478 aa-0.22□□□□□ -2.44
GYPA-203ENST00000503627 DMXL2Q8TDJ6 3036 aa-0.23□□□□□ -2.45
GYPA-203ENST00000503627 TRRAPQ9Y4A5 3859 aa-0.25□□□□□ -2.45
GYPA-203ENST00000503627 PRCDQ00LT1 54 aa-0.25□□□□□ -2.45
GYPA-203ENST00000503627 TTTY10Q9BZA0 68 aa-0.25□□□□□ -2.45
GYPA-203ENST00000503627 TEX15Q9BXT5 2789 aa-0.26□□□□□ -2.45
GYPA-203ENST00000503627 A0A096LNI7 61 aa-0.26□□□□□ -2.45
GYPA-203ENST00000503627 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
GYPA-203ENST00000503627 MT1LQ93083 61 aa-0.27□□□□□ -2.45
GYPA-203ENST00000503627 DOPEY1Q5JWR5 2465 aa-0.27□□□□□ -2.45
GYPA-203ENST00000503627 CFAP54Q96N23 3096 aa-0.27□□□□□ -2.45
GYPA-203ENST00000503627 MT1XP80297 61 aa-0.28□□□□□ -2.45
GYPA-203ENST00000503627 USH2AO75445 5202 aa-0.28□□□□□ -2.45
GYPA-203ENST00000503627 DNAH17Q9UFH2 4485 aa-0.28□□□□□ -2.45
GYPA-203ENST00000503627 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
GYPA-203ENST00000503627 LRBAP50851 2863 aa-0.3□□□□□ -2.46
GYPA-203ENST00000503627 K7EIM0 57 aa-0.31□□□□□ -2.46
GYPA-203ENST00000503627 DEFB4AO15263 64 aa-0.31□□□□□ -2.46
GYPA-203ENST00000503627 LAMA2P24043 3122 aaKnown RBP-0.33□□□□□ -2.46
GYPA-203ENST00000503627 SMG1Q96Q15 3661 aaKnown RBP-0.33□□□□□ -2.46
GYPA-203ENST00000503627 H3BSH0 61 aa-0.33□□□□□ -2.46
GYPA-203ENST00000503627 MT4P47944 62 aa-0.33□□□□□ -2.46
GYPA-203ENST00000503627 RYR1P21817 5038 aa-0.34□□□□□ -2.46
GYPA-203ENST00000503627 CFAP46Q8IYW2 2715 aa-0.34□□□□□ -2.46
GYPA-203ENST00000503627 MYO9AB2RTY4 2548 aa-0.36□□□□□ -2.47
GYPA-203ENST00000503627 HTN1P15515 57 aa-0.36□□□□□ -2.47
GYPA-203ENST00000503627 DNHD1Q96M86 4753 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms