RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
EXOSC9-203ENST00000503139 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
EXOSC9-203ENST00000503139 C1orf195Q5TG92 126 aa3.81□□□□□ -1.8
EXOSC9-203ENST00000503139 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
EXOSC9-203ENST00000503139 ALMS1Q8TCU4 4167 aa3.81□□□□□ -1.8
EXOSC9-203ENST00000503139 Q96NJ1 140 aa3.8□□□□□ -1.8
EXOSC9-203ENST00000503139 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
EXOSC9-203ENST00000503139 A0A087WTM6 91 aa3.79□□□□□ -1.8
EXOSC9-203ENST00000503139 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
EXOSC9-203ENST00000503139 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
EXOSC9-203ENST00000503139 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
EXOSC9-203ENST00000503139 LIMD2Q9BT23 127 aa3.78□□□□□ -1.8
EXOSC9-203ENST00000503139 PLAC8Q9NZF1 115 aa3.78□□□□□ -1.8
EXOSC9-203ENST00000503139 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
EXOSC9-203ENST00000503139 DNAH6Q9C0G6 4158 aa3.77□□□□□ -1.81
EXOSC9-203ENST00000503139 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
EXOSC9-203ENST00000503139 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
EXOSC9-203ENST00000503139 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
EXOSC9-203ENST00000503139 PSORS1C2Q9UIG4 136 aa3.75□□□□□ -1.81
EXOSC9-203ENST00000503139 LOC101927531A0A1B0GV80 90 aa3.73□□□□□ -1.81
EXOSC9-203ENST00000503139 A8MUN3 132 aa3.73□□□□□ -1.81
EXOSC9-203ENST00000503139 COA5Q86WW8 74 aa3.73□□□□□ -1.81
EXOSC9-203ENST00000503139 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
EXOSC9-203ENST00000503139 HERC2O95714 4834 aa3.72□□□□□ -1.81
EXOSC9-203ENST00000503139 Q5VV11 94 aa3.72□□□□□ -1.81
EXOSC9-203ENST00000503139 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
EXOSC9-203ENST00000503139 FAT2Q9NYQ8 4349 aa3.71□□□□□ -1.82
EXOSC9-203ENST00000503139 RYR1P21817 5038 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 PCOTHQ58A44 107 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 C1orf134Q5TEV5 83 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 PKHD1P08F94 4074 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
EXOSC9-203ENST00000503139 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
EXOSC9-203ENST00000503139 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
EXOSC9-203ENST00000503139 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
EXOSC9-203ENST00000503139 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
EXOSC9-203ENST00000503139 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
EXOSC9-203ENST00000503139 PKD1P98161 4303 aa3.65□□□□□ -1.82
EXOSC9-203ENST00000503139 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
EXOSC9-203ENST00000503139 ATP11AUNQ6ZP68 121 aa3.65□□□□□ -1.83
EXOSC9-203ENST00000503139 ACYP2P14621 99 aa3.64□□□□□ -1.83
EXOSC9-203ENST00000503139 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
EXOSC9-203ENST00000503139 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
EXOSC9-203ENST00000503139 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
EXOSC9-203ENST00000503139 LINC00313P59037 77 aa3.63□□□□□ -1.83
EXOSC9-203ENST00000503139 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
EXOSC9-203ENST00000503139 SPAG11AQ6PDA7 123 aa3.62□□□□□ -1.83
EXOSC9-203ENST00000503139 Q6ZSA8 131 aa3.62□□□□□ -1.83
EXOSC9-203ENST00000503139 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
EXOSC9-203ENST00000503139 LY6G6CO95867 125 aa3.61□□□□□ -1.83
EXOSC9-203ENST00000503139 LCA10Q71F78 164 aa3.61□□□□□ -1.83
EXOSC9-203ENST00000503139 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
EXOSC9-203ENST00000503139 C20orf166-AS1Q96NR2 134 aa3.6□□□□□ -1.83
EXOSC9-203ENST00000503139 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.83
EXOSC9-203ENST00000503139 SRRM2Q9UQ35 2752 aaKnown RBP3.59□□□□□ -1.83
EXOSC9-203ENST00000503139 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
EXOSC9-203ENST00000503139 HSPG2P98160 4391 aa3.58□□□□□ -1.84
EXOSC9-203ENST00000503139 A6NN06 94 aa3.57□□□□□ -1.84
EXOSC9-203ENST00000503139 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
EXOSC9-203ENST00000503139 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
EXOSC9-203ENST00000503139 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
EXOSC9-203ENST00000503139 SPINK1P00995 79 aa3.55□□□□□ -1.84
EXOSC9-203ENST00000503139 SPINK7P58062 85 aa3.55□□□□□ -1.84
EXOSC9-203ENST00000503139 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
EXOSC9-203ENST00000503139 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
EXOSC9-203ENST00000503139 A0A1B0GU69 56 aa3.53□□□□□ -1.84
EXOSC9-203ENST00000503139 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
EXOSC9-203ENST00000503139 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
EXOSC9-203ENST00000503139 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
EXOSC9-203ENST00000503139 RETNLBQ9BQ08 111 aa3.5□□□□□ -1.85
EXOSC9-203ENST00000503139 HERC1Q15751 4861 aa3.5□□□□□ -1.85
EXOSC9-203ENST00000503139 UQCR11O14957 56 aa3.48□□□□□ -1.85
EXOSC9-203ENST00000503139 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
EXOSC9-203ENST00000503139 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
EXOSC9-203ENST00000503139 FAT1Q14517 4588 aa3.45□□□□□ -1.86
EXOSC9-203ENST00000503139 MYCBP2O75592 4640 aa3.44□□□□□ -1.86
EXOSC9-203ENST00000503139 DMBT1Q9UGM3 2413 aaPredicted RBP3.42□□□□□ -1.86
EXOSC9-203ENST00000503139 KRTAP10-4P60372 401 aaPredicted RBP3.38□□□□□ -1.87
EXOSC9-203ENST00000503139 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
EXOSC9-203ENST00000503139 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
EXOSC9-203ENST00000503139 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
EXOSC9-203ENST00000503139 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
EXOSC9-203ENST00000503139 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
EXOSC9-203ENST00000503139 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
EXOSC9-203ENST00000503139 H1FX-AS1Q4G0G2 97 aa3.33□□□□□ -1.88
EXOSC9-203ENST00000503139 FLG2Q5D862 2391 aaPredicted RBP3.33□□□□□ -1.88
EXOSC9-203ENST00000503139 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
EXOSC9-203ENST00000503139 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
EXOSC9-203ENST00000503139 H0YAA0 97 aa3.31□□□□□ -1.88
EXOSC9-203ENST00000503139 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
EXOSC9-203ENST00000503139 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
EXOSC9-203ENST00000503139 LINC01554Q52M75 96 aa3.3□□□□□ -1.88
EXOSC9-203ENST00000503139 Q5VSD8 79 aa3.3□□□□□ -1.88
EXOSC9-203ENST00000503139 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
EXOSC9-203ENST00000503139 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
EXOSC9-203ENST00000503139 TNXBP22105 4242 aa3.25□□□□□ -1.89
EXOSC9-203ENST00000503139 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
EXOSC9-203ENST00000503139 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
EXOSC9-203ENST00000503139 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms