RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 H0YAA0 97 aa3.92□□□□□ -1.78
PDGFC-203ENST00000502773 XP32Q5T750 250 aa3.9□□□□□ -1.78
PDGFC-203ENST00000502773 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
PDGFC-203ENST00000502773 DNAH11Q96DT5 4516 aa3.88□□□□□ -1.79
PDGFC-203ENST00000502773 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
PDGFC-203ENST00000502773 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
PDGFC-203ENST00000502773 M0QZ58 72 aa3.82□□□□□ -1.8
PDGFC-203ENST00000502773 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
PDGFC-203ENST00000502773 SACSQ9NZJ4 4579 aa3.81□□□□□ -1.8
PDGFC-203ENST00000502773 KRTAP3-1Q9BYR8 98 aa3.81□□□□□ -1.8
PDGFC-203ENST00000502773 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
PDGFC-203ENST00000502773 DYNC1H1Q14204 4646 aaKnown RBP3.78□□□□□ -1.8
PDGFC-203ENST00000502773 DNHD1Q96M86 4753 aa3.77□□□□□ -1.81
PDGFC-203ENST00000502773 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
PDGFC-203ENST00000502773 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
PDGFC-203ENST00000502773 LYSTQ99698 3801 aa3.77□□□□□ -1.81
PDGFC-203ENST00000502773 FRAS1Q86XX4 4008 aa3.75□□□□□ -1.81
PDGFC-203ENST00000502773 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
PDGFC-203ENST00000502773 PKD1P98161 4303 aa3.75□□□□□ -1.81
PDGFC-203ENST00000502773 VPS13BQ7Z7G8 4022 aa3.71□□□□□ -1.82
PDGFC-203ENST00000502773 R4GN34 69 aa3.68□□□□□ -1.82
PDGFC-203ENST00000502773 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
PDGFC-203ENST00000502773 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.82
PDGFC-203ENST00000502773 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.82
PDGFC-203ENST00000502773 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
PDGFC-203ENST00000502773 RYR2Q92736 4967 aa3.63□□□□□ -1.83
PDGFC-203ENST00000502773 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
PDGFC-203ENST00000502773 FAT1Q14517 4588 aa3.57□□□□□ -1.84
PDGFC-203ENST00000502773 RYR1P21817 5038 aa3.55□□□□□ -1.84
PDGFC-203ENST00000502773 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
PDGFC-203ENST00000502773 FAT3Q8TDW7 4589 aa3.53□□□□□ -1.84
PDGFC-203ENST00000502773 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
PDGFC-203ENST00000502773 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
PDGFC-203ENST00000502773 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
PDGFC-203ENST00000502773 KRTAP4-5Q9BYR2 181 aa3.5□□□□□ -1.85
PDGFC-203ENST00000502773 TNXBP22105 4242 aa3.5□□□□□ -1.85
PDGFC-203ENST00000502773 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
PDGFC-203ENST00000502773 HSPG2P98160 4391 aa3.49□□□□□ -1.85
PDGFC-203ENST00000502773 KRTAP17-1Q9BYP8 105 aa3.47□□□□□ -1.85
PDGFC-203ENST00000502773 M0R2T5 61 aa3.45□□□□□ -1.86
PDGFC-203ENST00000502773 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
PDGFC-203ENST00000502773 TNP1P09430 55 aa3.41□□□□□ -1.86
PDGFC-203ENST00000502773 RYR3Q15413 4870 aa3.4□□□□□ -1.86
PDGFC-203ENST00000502773 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
PDGFC-203ENST00000502773 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
PDGFC-203ENST00000502773 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
PDGFC-203ENST00000502773 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
PDGFC-203ENST00000502773 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
PDGFC-203ENST00000502773 INE1O15225 51 aa3.34□□□□□ -1.87
PDGFC-203ENST00000502773 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
PDGFC-203ENST00000502773 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
PDGFC-203ENST00000502773 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
PDGFC-203ENST00000502773 SPRR2GQ9BYE4 73 aa3.26□□□□□ -1.89
PDGFC-203ENST00000502773 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
PDGFC-203ENST00000502773 HERC2O95714 4834 aa3.21□□□□□ -1.9
PDGFC-203ENST00000502773 LRP2P98164 4655 aa3.19□□□□□ -1.9
PDGFC-203ENST00000502773 MT1HP80294 61 aa3.19□□□□□ -1.9
PDGFC-203ENST00000502773 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
PDGFC-203ENST00000502773 HERC1Q15751 4861 aa3.15□□□□□ -1.91
PDGFC-203ENST00000502773 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
PDGFC-203ENST00000502773 MT2AP02795 61 aa3.12□□□□□ -1.91
PDGFC-203ENST00000502773 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
PDGFC-203ENST00000502773 ABCA13Q86UQ4 5058 aa3.09□□□□□ -1.91
PDGFC-203ENST00000502773 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
PDGFC-203ENST00000502773 LPAP08519 4548 aa3.07□□□□□ -1.92
PDGFC-203ENST00000502773 MT1FP04733 61 aa3.06□□□□□ -1.92
PDGFC-203ENST00000502773 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
PDGFC-203ENST00000502773 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
PDGFC-203ENST00000502773 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
PDGFC-203ENST00000502773 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
PDGFC-203ENST00000502773 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
PDGFC-203ENST00000502773 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
PDGFC-203ENST00000502773 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
PDGFC-203ENST00000502773 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
PDGFC-203ENST00000502773 KRTAP9-3Q9BYQ3 159 aa2.96□□□□□ -1.94
PDGFC-203ENST00000502773 PCLOQ9Y6V0 5065 aa2.96□□□□□ -1.94
PDGFC-203ENST00000502773 MT1BP07438 61 aa2.95□□□□□ -1.94
PDGFC-203ENST00000502773 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
PDGFC-203ENST00000502773 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
PDGFC-203ENST00000502773 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
PDGFC-203ENST00000502773 MT1XP80297 61 aa2.92□□□□□ -1.94
PDGFC-203ENST00000502773 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
PDGFC-203ENST00000502773 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.95
PDGFC-203ENST00000502773 KRTAP9-6A0A140TA67 174 aa2.86□□□□□ -1.95
PDGFC-203ENST00000502773 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
PDGFC-203ENST00000502773 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
PDGFC-203ENST00000502773 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
PDGFC-203ENST00000502773 RNF213Q63HN8 5207 aa2.84□□□□□ -1.96
PDGFC-203ENST00000502773 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
PDGFC-203ENST00000502773 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
PDGFC-203ENST00000502773 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.8□□□□□ -1.96
PDGFC-203ENST00000502773 MUC2Q02817 5179 aa2.8□□□□□ -1.96
PDGFC-203ENST00000502773 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
PDGFC-203ENST00000502773 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.97
PDGFC-203ENST00000502773 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
PDGFC-203ENST00000502773 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
PDGFC-203ENST00000502773 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
PDGFC-203ENST00000502773 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
PDGFC-203ENST00000502773 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
PDGFC-203ENST00000502773 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms