RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 DEFB104AQ8WTQ1 72 aa1.72□□□□□ -2.13
SUB1-202ENST00000502453 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP12-1P59990 96 aa1.71□□□□□ -2.13
SUB1-202ENST00000502453 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.13
SUB1-202ENST00000502453 DYNC1H1Q14204 4646 aaKnown RBP1.71□□□□□ -2.14
SUB1-202ENST00000502453 DEFB130BP0DP73 79 aa1.71□□□□□ -2.14
SUB1-202ENST00000502453 DEFB130AP0DP74 79 aa1.71□□□□□ -2.14
SUB1-202ENST00000502453 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
SUB1-202ENST00000502453 Q6ZSA8 131 aa1.71□□□□□ -2.14
SUB1-202ENST00000502453 HSPG2P98160 4391 aa1.7□□□□□ -2.14
SUB1-202ENST00000502453 NOTCH3Q9UM47 2321 aa1.69□□□□□ -2.14
SUB1-202ENST00000502453 PTPRZ1P23471 2315 aaPredicted RBP1.69□□□□□ -2.14
SUB1-202ENST00000502453 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
SUB1-202ENST00000502453 POLQO75417 2590 aa1.69□□□□□ -2.14
SUB1-202ENST00000502453 FLNAP21333 2647 aaKnown RBP1.68□□□□□ -2.14
SUB1-202ENST00000502453 MYO9AB2RTY4 2548 aa1.68□□□□□ -2.14
SUB1-202ENST00000502453 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
SUB1-202ENST00000502453 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
SUB1-202ENST00000502453 A0A1B0GVY2 172 aa1.68□□□□□ -2.14
SUB1-202ENST00000502453 SPRR1BP22528 89 aa1.68□□□□□ -2.14
SUB1-202ENST00000502453 CLPSL2Q6UWE3 100 aa1.67□□□□□ -2.14
SUB1-202ENST00000502453 C2CD3Q4AC94 2353 aa1.67□□□□□ -2.14
SUB1-202ENST00000502453 HERC1Q15751 4861 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 HTN3P15516 51 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 SPRR1AP35321 89 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 DNAH8Q96JB1 4490 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 DEFB124Q8NES8 71 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 LINC01556Q5JQF7 62 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 ACACAQ13085 2346 aa1.66□□□□□ -2.14
SUB1-202ENST00000502453 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.14
SUB1-202ENST00000502453 SPTAN1Q13813 2472 aaKnown RBP1.65□□□□□ -2.15
SUB1-202ENST00000502453 KRTAP13-3Q3SY46 172 aa1.65□□□□□ -2.15
SUB1-202ENST00000502453 DEFB1P60022 68 aa1.65□□□□□ -2.15
SUB1-202ENST00000502453 SPTBN1Q01082 2364 aaKnown RBP1.64□□□□□ -2.15
SUB1-202ENST00000502453 NOTCH2Q04721 2471 aa1.64□□□□□ -2.15
SUB1-202ENST00000502453 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
SUB1-202ENST00000502453 STAB1Q9NY15 2570 aa1.63□□□□□ -2.15
SUB1-202ENST00000502453 NBEAL2Q6ZNJ1 2754 aa1.62□□□□□ -2.15
SUB1-202ENST00000502453 PRLHP81277 87 aa1.62□□□□□ -2.15
SUB1-202ENST00000502453 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
SUB1-202ENST00000502453 CREBBPQ92793 2442 aa1.61□□□□□ -2.15
SUB1-202ENST00000502453 LRP1BQ9NZR2 4599 aa1.61□□□□□ -2.15
SUB1-202ENST00000502453 A0A096LPF7 62 aa1.61□□□□□ -2.15
SUB1-202ENST00000502453 TNXBP22105 4242 aa1.61□□□□□ -2.15
SUB1-202ENST00000502453 H1FX-AS1Q4G0G2 97 aa1.61□□□□□ -2.15
SUB1-202ENST00000502453 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
SUB1-202ENST00000502453 COL6A5A8TX70 2615 aa1.6□□□□□ -2.15
SUB1-202ENST00000502453 F8P00451 2351 aa1.6□□□□□ -2.15
SUB1-202ENST00000502453 ACANP16112 2415 aa1.59□□□□□ -2.15
SUB1-202ENST00000502453 PCNX1Q96RV3 2341 aa1.59□□□□□ -2.15
SUB1-202ENST00000502453 TENM2Q9NT68 2774 aa1.59□□□□□ -2.15
SUB1-202ENST00000502453 ANKHD1Q8IWZ3 2542 aaKnown RBP1.59□□□□□ -2.15
SUB1-202ENST00000502453 KRTAP10-10P60014 251 aa1.59□□□□□ -2.16
SUB1-202ENST00000502453 DEFB136Q30KP8 78 aa1.59□□□□□ -2.16
SUB1-202ENST00000502453 ATRQ13535 2644 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 SPINK1P00995 79 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 SPINK6Q6UWN8 80 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 MTORP42345 2549 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 TENM3Q9P273 2699 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 MACF1Q9UPN3 7388 aaKnown RBP1.58□□□□□ -2.16
SUB1-202ENST00000502453 MGAM2Q2M2H8 2515 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 WNK1Q9H4A3 2382 aa1.58□□□□□ -2.16
SUB1-202ENST00000502453 HMCN2Q8NDA2 5059 aa1.57□□□□□ -2.16
SUB1-202ENST00000502453 PKDREJQ9NTG1 2253 aa1.57□□□□□ -2.16
SUB1-202ENST00000502453 KRTAP10-5P60370 271 aa1.57□□□□□ -2.16
SUB1-202ENST00000502453 DEFB135Q30KP9 77 aa1.57□□□□□ -2.16
SUB1-202ENST00000502453 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
SUB1-202ENST00000502453 ROS1P08922 2347 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 A0A096LNI7 61 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 K7EIL1 84 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 NBASA2RRP1 2371 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 SPTA1P02549 2419 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 SPG11Q96JI7 2443 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 AKAP6Q13023 2319 aa1.56□□□□□ -2.16
SUB1-202ENST00000502453 FAT1Q14517 4588 aa1.55□□□□□ -2.16
SUB1-202ENST00000502453 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
SUB1-202ENST00000502453 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
SUB1-202ENST00000502453 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
SUB1-202ENST00000502453 M0QZ58 72 aa1.54□□□□□ -2.16
SUB1-202ENST00000502453 KRTAP10-7P60409 375 aaPredicted RBP1.54□□□□□ -2.16
SUB1-202ENST00000502453 LRP1Q07954 4544 aaKnown RBP1.53□□□□□ -2.16
SUB1-202ENST00000502453 CSPG4Q6UVK1 2322 aa1.53□□□□□ -2.16
SUB1-202ENST00000502453 RPS29P62273 56 aaKnown RBP1.52□□□□□ -2.17
SUB1-202ENST00000502453 SMR3AQ99954 134 aa1.52□□□□□ -2.17
SUB1-202ENST00000502453 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
SUB1-202ENST00000502453 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
SUB1-202ENST00000502453 NOTCH1P46531 2555 aa1.51□□□□□ -2.17
SUB1-202ENST00000502453 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
SUB1-202ENST00000502453 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SUB1-202ENST00000502453 CCDC168Q8NDH2 2452 aa1.5□□□□□ -2.17
SUB1-202ENST00000502453 HIVEP2P31629 2446 aa1.5□□□□□ -2.17
SUB1-202ENST00000502453 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
SUB1-202ENST00000502453 TLN2Q9Y4G6 2542 aa1.49□□□□□ -2.17
SUB1-202ENST00000502453 DEFB4AO15263 64 aa1.48□□□□□ -2.17
SUB1-202ENST00000502453 RNF213Q63HN8 5207 aa1.48□□□□□ -2.17
SUB1-202ENST00000502453 LPAP08519 4548 aa1.48□□□□□ -2.17
SUB1-202ENST00000502453 MUC2Q02817 5179 aa1.48□□□□□ -2.17
SUB1-202ENST00000502453 S4R3F8 94 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms