RNA–Protein interactions for RNA: ENST00000498374.1

ATXN1-210, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-210ENST00000498374 SPINK1P00995 79 aa4.2□□□□□ -1.74
ATXN1-210ENST00000498374 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
ATXN1-210ENST00000498374 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
ATXN1-210ENST00000498374 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
ATXN1-210ENST00000498374 A0A1B0GU69 56 aa4.17□□□□□ -1.74
ATXN1-210ENST00000498374 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
ATXN1-210ENST00000498374 SPINK7P58062 85 aa4.16□□□□□ -1.74
ATXN1-210ENST00000498374 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.74
ATXN1-210ENST00000498374 A8MU10 97 aa4.15□□□□□ -1.74
ATXN1-210ENST00000498374 UQCR11O14957 56 aa4.14□□□□□ -1.75
ATXN1-210ENST00000498374 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
ATXN1-210ENST00000498374 DNAH5Q8TE73 4624 aa4.14□□□□□ -1.75
ATXN1-210ENST00000498374 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
ATXN1-210ENST00000498374 KRTAP10-1P60331 282 aa4.13□□□□□ -1.75
ATXN1-210ENST00000498374 ROMO1P60602 79 aa4.13□□□□□ -1.75
ATXN1-210ENST00000498374 LINC00304Q8N9R0 145 aa4.11□□□□□ -1.75
ATXN1-210ENST00000498374 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
ATXN1-210ENST00000498374 A0A1B0GU33 70 aa4.06□□□□□ -1.76
ATXN1-210ENST00000498374 PKD1P98161 4303 aa4.06□□□□□ -1.76
ATXN1-210ENST00000498374 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
ATXN1-210ENST00000498374 VPS13BQ7Z7G8 4022 aa4.04□□□□□ -1.76
ATXN1-210ENST00000498374 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
ATXN1-210ENST00000498374 SACSQ9NZJ4 4579 aa4.02□□□□□ -1.77
ATXN1-210ENST00000498374 KRTAP25-1Q3LHN0 102 aa3.99□□□□□ -1.77
ATXN1-210ENST00000498374 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
ATXN1-210ENST00000498374 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
ATXN1-210ENST00000498374 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
ATXN1-210ENST00000498374 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
ATXN1-210ENST00000498374 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
ATXN1-210ENST00000498374 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
ATXN1-210ENST00000498374 KRTAP10-4P60372 401 aaPredicted RBP3.92□□□□□ -1.78
ATXN1-210ENST00000498374 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
ATXN1-210ENST00000498374 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
ATXN1-210ENST00000498374 P0C880 135 aa3.92□□□□□ -1.78
ATXN1-210ENST00000498374 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
ATXN1-210ENST00000498374 C9orf92A6NGG3 77 aa3.91□□□□□ -1.78
ATXN1-210ENST00000498374 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
ATXN1-210ENST00000498374 RYR2Q92736 4967 aa3.89□□□□□ -1.79
ATXN1-210ENST00000498374 RYR3Q15413 4870 aa3.89□□□□□ -1.79
ATXN1-210ENST00000498374 H0YAA0 97 aa3.89□□□□□ -1.79
ATXN1-210ENST00000498374 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
ATXN1-210ENST00000498374 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
ATXN1-210ENST00000498374 R4GN34 69 aa3.88□□□□□ -1.79
ATXN1-210ENST00000498374 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
ATXN1-210ENST00000498374 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
ATXN1-210ENST00000498374 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
ATXN1-210ENST00000498374 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
ATXN1-210ENST00000498374 CSAG1Q6PB30 78 aa3.84□□□□□ -1.79
ATXN1-210ENST00000498374 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
ATXN1-210ENST00000498374 TNXBP22105 4242 aa3.81□□□□□ -1.8
ATXN1-210ENST00000498374 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
ATXN1-210ENST00000498374 S4R3F8 94 aa3.8□□□□□ -1.8
ATXN1-210ENST00000498374 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
ATXN1-210ENST00000498374 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
ATXN1-210ENST00000498374 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
ATXN1-210ENST00000498374 Q5VSD8 79 aa3.76□□□□□ -1.81
ATXN1-210ENST00000498374 FAT1Q14517 4588 aa3.75□□□□□ -1.81
ATXN1-210ENST00000498374 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
ATXN1-210ENST00000498374 HSPG2P98160 4391 aa3.73□□□□□ -1.81
ATXN1-210ENST00000498374 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
ATXN1-210ENST00000498374 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
ATXN1-210ENST00000498374 KIAA1109Q2LD37 5005 aa3.68□□□□□ -1.82
ATXN1-210ENST00000498374 M0QZ58 72 aa3.68□□□□□ -1.82
ATXN1-210ENST00000498374 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
ATXN1-210ENST00000498374 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
ATXN1-210ENST00000498374 RYR1P21817 5038 aa3.65□□□□□ -1.82
ATXN1-210ENST00000498374 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
ATXN1-210ENST00000498374 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
ATXN1-210ENST00000498374 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
ATXN1-210ENST00000498374 MT1HL1P0DM35 61 aa3.63□□□□□ -1.83
ATXN1-210ENST00000498374 A0A0D9SG42 100 aa3.62□□□□□ -1.83
ATXN1-210ENST00000498374 CRIPTQ9P021 101 aa3.62□□□□□ -1.83
ATXN1-210ENST00000498374 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
ATXN1-210ENST00000498374 HERC2O95714 4834 aa3.59□□□□□ -1.84
ATXN1-210ENST00000498374 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
ATXN1-210ENST00000498374 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
ATXN1-210ENST00000498374 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
ATXN1-210ENST00000498374 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
ATXN1-210ENST00000498374 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
ATXN1-210ENST00000498374 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
ATXN1-210ENST00000498374 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
ATXN1-210ENST00000498374 MT3P25713 68 aa3.49□□□□□ -1.85
ATXN1-210ENST00000498374 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
ATXN1-210ENST00000498374 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
ATXN1-210ENST00000498374 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
ATXN1-210ENST00000498374 LRP2P98164 4655 aa3.39□□□□□ -1.87
ATXN1-210ENST00000498374 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
ATXN1-210ENST00000498374 INE1O15225 51 aa3.38□□□□□ -1.87
ATXN1-210ENST00000498374 HERC1Q15751 4861 aa3.37□□□□□ -1.87
ATXN1-210ENST00000498374 LPAP08519 4548 aa3.34□□□□□ -1.88
ATXN1-210ENST00000498374 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
ATXN1-210ENST00000498374 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
ATXN1-210ENST00000498374 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
ATXN1-210ENST00000498374 PLAC4Q8WY50 150 aa3.3□□□□□ -1.88
ATXN1-210ENST00000498374 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
ATXN1-210ENST00000498374 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
ATXN1-210ENST00000498374 TNP1P09430 55 aa3.26□□□□□ -1.89
ATXN1-210ENST00000498374 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
ATXN1-210ENST00000498374 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
ATXN1-210ENST00000498374 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms