RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 C10orf95Q9H7T3 257 aa6.1□□□□□ -1.43
MACF1-225ENST00000497807 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.43
MACF1-225ENST00000497807 SPRR1BP22528 89 aa6.08□□□□□ -1.44
MACF1-225ENST00000497807 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
MACF1-225ENST00000497807 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
MACF1-225ENST00000497807 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
MACF1-225ENST00000497807 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
MACF1-225ENST00000497807 FAT1Q14517 4588 aa6.05□□□□□ -1.44
MACF1-225ENST00000497807 HSPG2P98160 4391 aa6.04□□□□□ -1.44
MACF1-225ENST00000497807 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
MACF1-225ENST00000497807 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.44
MACF1-225ENST00000497807 PLAC4Q8WY50 150 aa6.02□□□□□ -1.44
MACF1-225ENST00000497807 R4GN34 69 aa6.02□□□□□ -1.45
MACF1-225ENST00000497807 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
MACF1-225ENST00000497807 Q5VSD8 79 aa6.01□□□□□ -1.45
MACF1-225ENST00000497807 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
MACF1-225ENST00000497807 RYR1P21817 5038 aa5.99□□□□□ -1.45
MACF1-225ENST00000497807 KRTAP4-5Q9BYR2 181 aa5.97□□□□□ -1.45
MACF1-225ENST00000497807 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.45
MACF1-225ENST00000497807 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
MACF1-225ENST00000497807 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
MACF1-225ENST00000497807 PRLHP81277 87 aa5.93□□□□□ -1.46
MACF1-225ENST00000497807 SPINK1P00995 79 aa5.91□□□□□ -1.46
MACF1-225ENST00000497807 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
MACF1-225ENST00000497807 HERC2O95714 4834 aa5.9□□□□□ -1.47
MACF1-225ENST00000497807 SPINK6Q6UWN8 80 aa5.89□□□□□ -1.47
MACF1-225ENST00000497807 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
MACF1-225ENST00000497807 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
MACF1-225ENST00000497807 XP32Q5T750 250 aa5.83□□□□□ -1.48
MACF1-225ENST00000497807 MYCBP2O75592 4640 aa5.82□□□□□ -1.48
MACF1-225ENST00000497807 LRP1Q07954 4544 aaKnown RBP5.81□□□□□ -1.48
MACF1-225ENST00000497807 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
MACF1-225ENST00000497807 INE1O15225 51 aa5.8□□□□□ -1.48
MACF1-225ENST00000497807 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
MACF1-225ENST00000497807 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
MACF1-225ENST00000497807 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
MACF1-225ENST00000497807 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
MACF1-225ENST00000497807 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.5
MACF1-225ENST00000497807 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
MACF1-225ENST00000497807 MT1HL1P0DM35 61 aa5.71□□□□□ -1.5
MACF1-225ENST00000497807 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
MACF1-225ENST00000497807 S4R3F8 94 aa5.66□□□□□ -1.5
MACF1-225ENST00000497807 TNXBP22105 4242 aa5.65□□□□□ -1.5
MACF1-225ENST00000497807 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
MACF1-225ENST00000497807 HERC1Q15751 4861 aa5.58□□□□□ -1.52
MACF1-225ENST00000497807 A0A0D9SG42 100 aa5.57□□□□□ -1.52
MACF1-225ENST00000497807 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
MACF1-225ENST00000497807 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
MACF1-225ENST00000497807 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
MACF1-225ENST00000497807 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
MACF1-225ENST00000497807 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
MACF1-225ENST00000497807 LPAP08519 4548 aa5.41□□□□□ -1.54
MACF1-225ENST00000497807 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
MACF1-225ENST00000497807 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
MACF1-225ENST00000497807 LRP2P98164 4655 aa5.36□□□□□ -1.55
MACF1-225ENST00000497807 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
MACF1-225ENST00000497807 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
MACF1-225ENST00000497807 MUC2Q02817 5179 aa5.2□□□□□ -1.58
MACF1-225ENST00000497807 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
MACF1-225ENST00000497807 M0QZ58 72 aa5.13□□□□□ -1.59
MACF1-225ENST00000497807 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
MACF1-225ENST00000497807 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
MACF1-225ENST00000497807 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
MACF1-225ENST00000497807 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
MACF1-225ENST00000497807 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
MACF1-225ENST00000497807 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
MACF1-225ENST00000497807 M0R2T5 61 aa4.84□□□□□ -1.63
MACF1-225ENST00000497807 MT1HP80294 61 aa4.83□□□□□ -1.64
MACF1-225ENST00000497807 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
MACF1-225ENST00000497807 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
MACF1-225ENST00000497807 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
MACF1-225ENST00000497807 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.65
MACF1-225ENST00000497807 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
MACF1-225ENST00000497807 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
MACF1-225ENST00000497807 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
MACF1-225ENST00000497807 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
MACF1-225ENST00000497807 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
MACF1-225ENST00000497807 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
MACF1-225ENST00000497807 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
MACF1-225ENST00000497807 MT2AP02795 61 aa4.58□□□□□ -1.68
MACF1-225ENST00000497807 TNP1P09430 55 aa4.57□□□□□ -1.68
MACF1-225ENST00000497807 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
MACF1-225ENST00000497807 MT1FP04733 61 aa4.55□□□□□ -1.68
MACF1-225ENST00000497807 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
MACF1-225ENST00000497807 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
MACF1-225ENST00000497807 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
MACF1-225ENST00000497807 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
MACF1-225ENST00000497807 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
MACF1-225ENST00000497807 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
MACF1-225ENST00000497807 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
MACF1-225ENST00000497807 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
MACF1-225ENST00000497807 USH2AO75445 5202 aa4.35□□□□□ -1.71
MACF1-225ENST00000497807 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.72
MACF1-225ENST00000497807 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
MACF1-225ENST00000497807 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
MACF1-225ENST00000497807 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
MACF1-225ENST00000497807 MT1BP07438 61 aa4.23□□□□□ -1.73
MACF1-225ENST00000497807 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
MACF1-225ENST00000497807 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
MACF1-225ENST00000497807 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms