RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 DNAH11Q96DT5 4516 aa-0.3□□□□□ -2.46
SOX2-OT-216ENST00000497122 M0QZ58 72 aa-0.31□□□□□ -2.46
SOX2-OT-216ENST00000497122 IQGAP1P46940 1657 aa-0.32□□□□□ -2.46
SOX2-OT-216ENST00000497122 MT4P47944 62 aa-0.32□□□□□ -2.46
SOX2-OT-216ENST00000497122 DNAH1Q9P2D7 4330 aa-0.32□□□□□ -2.46
SOX2-OT-216ENST00000497122 LINC01546A6NGU7 62 aa-0.33□□□□□ -2.46
SOX2-OT-216ENST00000497122 HERC2O95714 4834 aa-0.34□□□□□ -2.46
SOX2-OT-216ENST00000497122 CLPSL2Q6UWE3 100 aa-0.34□□□□□ -2.46
SOX2-OT-216ENST00000497122 A0A0C4DFX4 3053 aa-0.34□□□□□ -2.46
SOX2-OT-216ENST00000497122 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.46
SOX2-OT-216ENST00000497122 FAT1Q14517 4588 aa-0.35□□□□□ -2.46
SOX2-OT-216ENST00000497122 SPTBN5Q9NRC6 3674 aaKnown RBP-0.35□□□□□ -2.46
SOX2-OT-216ENST00000497122 RANBP2P49792 3224 aaKnown RBP-0.35□□□□□ -2.47
SOX2-OT-216ENST00000497122 DEFB131AP59861 70 aa-0.35□□□□□ -2.47
SOX2-OT-216ENST00000497122 RIF1Q5UIP0 2472 aaKnown RBP-0.35□□□□□ -2.47
SOX2-OT-216ENST00000497122 TRIOO75962 3097 aa-0.36□□□□□ -2.47
SOX2-OT-216ENST00000497122 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
SOX2-OT-216ENST00000497122 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.36□□□□□ -2.47
SOX2-OT-216ENST00000497122 HERC1Q15751 4861 aa-0.36□□□□□ -2.47
SOX2-OT-216ENST00000497122 RYR3Q15413 4870 aa-0.37□□□□□ -2.47
SOX2-OT-216ENST00000497122 MGAM2Q2M2H8 2515 aa-0.37□□□□□ -2.47
SOX2-OT-216ENST00000497122 STARD9Q9P2P6 4700 aa-0.38□□□□□ -2.47
SOX2-OT-216ENST00000497122 COL6A5A8TX70 2615 aa-0.39□□□□□ -2.47
SOX2-OT-216ENST00000497122 WDR87Q6ZQQ6 2873 aa-0.4□□□□□ -2.47
SOX2-OT-216ENST00000497122 USH2AO75445 5202 aa-0.41□□□□□ -2.47
SOX2-OT-216ENST00000497122 HYDINQ4G0P3 5121 aa-0.41□□□□□ -2.48
SOX2-OT-216ENST00000497122 RYR1P21817 5038 aa-0.42□□□□□ -2.48
SOX2-OT-216ENST00000497122 UBR4Q5T4S7 5183 aa-0.42□□□□□ -2.48
SOX2-OT-216ENST00000497122 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
SOX2-OT-216ENST00000497122 DNAH8Q96JB1 4490 aa-0.42□□□□□ -2.48
SOX2-OT-216ENST00000497122 COL12A1Q99715 3063 aa-0.42□□□□□ -2.48
SOX2-OT-216ENST00000497122 DNAH7Q8WXX0 4024 aa-0.43□□□□□ -2.48
SOX2-OT-216ENST00000497122 NFAT5O94916 1531 aa-0.44□□□□□ -2.48
SOX2-OT-216ENST00000497122 DEFB1P60022 68 aa-0.46□□□□□ -2.48
SOX2-OT-216ENST00000497122 EPPK1P58107 5090 aaKnown RBP-0.46□□□□□ -2.48
SOX2-OT-216ENST00000497122 USP9YO00507 2555 aaPredicted RBP-0.47□□□□□ -2.48
SOX2-OT-216ENST00000497122 SPART-AS1P0CW21 52 aa-0.47□□□□□ -2.48
SOX2-OT-216ENST00000497122 TOMM5Q8N4H5 51 aa-0.47□□□□□ -2.48
SOX2-OT-216ENST00000497122 USP9XQ93008 2570 aaPredicted RBP-0.48□□□□□ -2.49
SOX2-OT-216ENST00000497122 POLR2KP53803 58 aaKnown RBP-0.48□□□□□ -2.49
SOX2-OT-216ENST00000497122 LAMA2P24043 3122 aaKnown RBP-0.48□□□□□ -2.49
SOX2-OT-216ENST00000497122 NDUFA1O15239 70 aa-0.49□□□□□ -2.49
SOX2-OT-216ENST00000497122 KRTAP19-5Q3LI72 72 aa-0.49□□□□□ -2.49
SOX2-OT-216ENST00000497122 NIPBLQ6KC79 2804 aaeCLIP-0.49□□□□□ -2.49
SOX2-OT-216ENST00000497122 TLN2Q9Y4G6 2542 aa-0.49□□□□□ -2.49
SOX2-OT-216ENST00000497122 ITPR3Q14573 2671 aa-0.5□□□□□ -2.49
SOX2-OT-216ENST00000497122 RYR2Q92736 4967 aa-0.5□□□□□ -2.49
SOX2-OT-216ENST00000497122 KRTAP8-1Q8IUC2 63 aa-0.5□□□□□ -2.49
SOX2-OT-216ENST00000497122 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
SOX2-OT-216ENST00000497122 RNF213Q63HN8 5207 aa-0.51□□□□□ -2.49
SOX2-OT-216ENST00000497122 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
SOX2-OT-216ENST00000497122 SMR3BP02814 79 aaPredicted RBP-0.51□□□□□ -2.49
SOX2-OT-216ENST00000497122 CLTCL1P53675 1640 aa-0.51□□□□□ -2.49
SOX2-OT-216ENST00000497122 MUC17Q685J3 4493 aa-0.51□□□□□ -2.49
SOX2-OT-216ENST00000497122 TRPM2O94759 1503 aa-0.53□□□□□ -2.49
SOX2-OT-216ENST00000497122 IQGAP2Q13576 1575 aa-0.58□□□□□ -2.5
SOX2-OT-216ENST00000497122 RELNP78509 3460 aa-0.58□□□□□ -2.5
SOX2-OT-216ENST00000497122 DNHD1Q96M86 4753 aa-0.58□□□□□ -2.5
SOX2-OT-216ENST00000497122 FRYQ5TBA9 3013 aa-0.59□□□□□ -2.5
SOX2-OT-216ENST00000497122 PLECQ15149 4684 aaKnown RBP-0.6□□□□□ -2.51
SOX2-OT-216ENST00000497122 MT1HP80294 61 aa-0.61□□□□□ -2.51
SOX2-OT-216ENST00000497122 ABCA13Q86UQ4 5058 aa-0.62□□□□□ -2.51
SOX2-OT-216ENST00000497122 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
SOX2-OT-216ENST00000497122 LAMA3Q16787 3333 aa-0.64□□□□□ -2.51
SOX2-OT-216ENST00000497122 MT1HL1P0DM35 61 aa-0.64□□□□□ -2.51
SOX2-OT-216ENST00000497122 TEX15Q9BXT5 2789 aa-0.64□□□□□ -2.51
SOX2-OT-216ENST00000497122 KRTAP20-1Q3LI63 56 aa-0.65□□□□□ -2.51
SOX2-OT-216ENST00000497122 CMYA5Q8N3K9 4069 aa-0.66□□□□□ -2.51
SOX2-OT-216ENST00000497122 CHD7Q9P2D1 2997 aa-0.68□□□□□ -2.52
SOX2-OT-216ENST00000497122 ADGRG4Q8IZF6 3080 aa-0.69□□□□□ -2.52
SOX2-OT-216ENST00000497122 ITPR2Q14571 2701 aa-0.7□□□□□ -2.52
SOX2-OT-216ENST00000497122 CFAP46Q8IYW2 2715 aa-0.7□□□□□ -2.52
SOX2-OT-216ENST00000497122 CEP295Q9C0D2 2601 aa-0.7□□□□□ -2.52
SOX2-OT-216ENST00000497122 ZFHX4Q86UP3 3567 aa-0.71□□□□□ -2.52
SOX2-OT-216ENST00000497122 C5orf42Q9H799 3197 aa-0.72□□□□□ -2.52
SOX2-OT-216ENST00000497122 MT1XP80297 61 aa-0.72□□□□□ -2.52
SOX2-OT-216ENST00000497122 DNAH10Q8IVF4 4471 aa-0.73□□□□□ -2.53
SOX2-OT-216ENST00000497122 EYSQ5T1H1 3165 aa-0.73□□□□□ -2.53
SOX2-OT-216ENST00000497122 KRTAP19-6Q3LI70 58 aa-0.73□□□□□ -2.53
SOX2-OT-216ENST00000497122 DYNC1H1Q14204 4646 aaKnown RBP-0.73□□□□□ -2.53
SOX2-OT-216ENST00000497122 MYO9AB2RTY4 2548 aa-0.74□□□□□ -2.53
SOX2-OT-216ENST00000497122 TLN1Q9Y490 2541 aaKnown RBP-0.74□□□□□ -2.53
SOX2-OT-216ENST00000497122 MT1BP07438 61 aa-0.74□□□□□ -2.53
SOX2-OT-216ENST00000497122 SRCAPQ6ZRS2 3230 aa-0.75□□□□□ -2.53
SOX2-OT-216ENST00000497122 SPTAN1Q13813 2472 aaKnown RBP-0.75□□□□□ -2.53
SOX2-OT-216ENST00000497122 SMG1Q96Q15 3661 aaKnown RBP-0.76□□□□□ -2.53
SOX2-OT-216ENST00000497122 MT2AP02795 61 aa-0.77□□□□□ -2.53
SOX2-OT-216ENST00000497122 CSMD1Q96PZ7 3565 aa-0.77□□□□□ -2.53
SOX2-OT-216ENST00000497122 MT1GP13640 62 aa-0.78□□□□□ -2.53
SOX2-OT-216ENST00000497122 MT1MQ8N339 61 aa-0.78□□□□□ -2.53
SOX2-OT-216ENST00000497122 MGAQ8IWI9 3026 aa-0.8□□□□□ -2.54
SOX2-OT-216ENST00000497122 TRRAPQ9Y4A5 3859 aa-0.8□□□□□ -2.54
SOX2-OT-216ENST00000497122 MT1EP04732 61 aa-0.81□□□□□ -2.54
SOX2-OT-216ENST00000497122 MT1LQ93083 61 aa-0.81□□□□□ -2.54
SOX2-OT-216ENST00000497122 DNAH17Q9UFH2 4485 aa-0.81□□□□□ -2.54
SOX2-OT-216ENST00000497122 DNAH5Q8TE73 4624 aa-0.82□□□□□ -2.54
SOX2-OT-216ENST00000497122 LRBAP50851 2863 aa-0.83□□□□□ -2.54
SOX2-OT-216ENST00000497122 MYO15AQ9UKN7 3530 aa-0.84□□□□□ -2.54
SOX2-OT-216ENST00000497122 BOD1L1Q8NFC6 3051 aa-0.85□□□□□ -2.54
SOX2-OT-216ENST00000497122 LEAP2Q969E1 77 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms