RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
SOX2-OT-216ENST00000497122 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
SOX2-OT-216ENST00000497122 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
SOX2-OT-216ENST00000497122 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
SOX2-OT-216ENST00000497122 FOXD1Q16676 465 aa21.35■■□□□ 1.01
SOX2-OT-216ENST00000497122 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
SOX2-OT-216ENST00000497122 ADRA2BP18089 450 aa20.09■□□□□ 0.81
SOX2-OT-216ENST00000497122 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
SOX2-OT-216ENST00000497122 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
SOX2-OT-216ENST00000497122 MSH5O43196 834 aa19.94■□□□□ 0.78
SOX2-OT-216ENST00000497122 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
SOX2-OT-216ENST00000497122 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
SOX2-OT-216ENST00000497122 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
SOX2-OT-216ENST00000497122 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
SOX2-OT-216ENST00000497122 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
SOX2-OT-216ENST00000497122 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
SOX2-OT-216ENST00000497122 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
SOX2-OT-216ENST00000497122 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-216ENST00000497122 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SOX2-OT-216ENST00000497122 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-216ENST00000497122 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
SOX2-OT-216ENST00000497122 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
SOX2-OT-216ENST00000497122 KCNA4P22459 653 aa17.06■□□□□ 0.32
SOX2-OT-216ENST00000497122 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
SOX2-OT-216ENST00000497122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.89■□□□□ 0.29
SOX2-OT-216ENST00000497122 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SOX2-OT-216ENST00000497122 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
SOX2-OT-216ENST00000497122 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-216ENST00000497122 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
SOX2-OT-216ENST00000497122 CAPN15O75808 1086 aa16.25■□□□□ 0.19
SOX2-OT-216ENST00000497122 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-216ENST00000497122 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
SOX2-OT-216ENST00000497122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-216ENST00000497122 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-216ENST00000497122 APLP2Q06481 763 aa16.06■□□□□ 0.16
SOX2-OT-216ENST00000497122 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-216ENST00000497122 DSG3P32926 999 aa15.99■□□□□ 0.15
SOX2-OT-216ENST00000497122 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-216ENST00000497122 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-216ENST00000497122 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
SOX2-OT-216ENST00000497122 ABCB7O75027 752 aa15.89■□□□□ 0.13
SOX2-OT-216ENST00000497122 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
SOX2-OT-216ENST00000497122 ZBTB22O15209 634 aa15.65■□□□□ 0.1
SOX2-OT-216ENST00000497122 POLA2Q14181 598 aa15.58■□□□□ 0.08
SOX2-OT-216ENST00000497122 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
SOX2-OT-216ENST00000497122 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
SOX2-OT-216ENST00000497122 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
SOX2-OT-216ENST00000497122 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-216ENST00000497122 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
SOX2-OT-216ENST00000497122 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
SOX2-OT-216ENST00000497122 POTEHQ6S545 545 aa15.09■□□□□ 0.01
SOX2-OT-216ENST00000497122 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
SOX2-OT-216ENST00000497122 FBLN2P98095 1184 aa15□□□□□ -0.01
SOX2-OT-216ENST00000497122 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
SOX2-OT-216ENST00000497122 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
SOX2-OT-216ENST00000497122 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-216ENST00000497122 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-216ENST00000497122 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
SOX2-OT-216ENST00000497122 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
SOX2-OT-216ENST00000497122 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
SOX2-OT-216ENST00000497122 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
SOX2-OT-216ENST00000497122 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
SOX2-OT-216ENST00000497122 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
SOX2-OT-216ENST00000497122 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
SOX2-OT-216ENST00000497122 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
SOX2-OT-216ENST00000497122 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
SOX2-OT-216ENST00000497122 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
SOX2-OT-216ENST00000497122 FXR2P51116 673 aaKnown RBP eCLIP14.45□□□□□ -0.1
SOX2-OT-216ENST00000497122 HAX1O00165 279 aa14.34□□□□□ -0.11
SOX2-OT-216ENST00000497122 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-216ENST00000497122 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
SOX2-OT-216ENST00000497122 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SOX2-OT-216ENST00000497122 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
SOX2-OT-216ENST00000497122 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
SOX2-OT-216ENST00000497122 EVX2Q03828 476 aa14.07□□□□□ -0.16
SOX2-OT-216ENST00000497122 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
SOX2-OT-216ENST00000497122 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
SOX2-OT-216ENST00000497122 FARP1Q9Y4F1 1045 aaPredicted RBP13.98□□□□□ -0.17
SOX2-OT-216ENST00000497122 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
SOX2-OT-216ENST00000497122 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-216ENST00000497122 PROM2Q8N271 834 aa13.8□□□□□ -0.2
SOX2-OT-216ENST00000497122 GABBR2O75899 941 aa13.78□□□□□ -0.2
SOX2-OT-216ENST00000497122 FKBP8Q14318 412 aa13.77□□□□□ -0.21
SOX2-OT-216ENST00000497122 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
SOX2-OT-216ENST00000497122 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
SOX2-OT-216ENST00000497122 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
SOX2-OT-216ENST00000497122 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
SOX2-OT-216ENST00000497122 MIER1Q8N108 512 aa13.64□□□□□ -0.23
SOX2-OT-216ENST00000497122 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-216ENST00000497122 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-216ENST00000497122 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
SOX2-OT-216ENST00000497122 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
SOX2-OT-216ENST00000497122 CLCN6P51797 869 aa13.55□□□□□ -0.24
SOX2-OT-216ENST00000497122 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
SOX2-OT-216ENST00000497122 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
SOX2-OT-216ENST00000497122 GALR2O43603 387 aaPredicted RBP13.48□□□□□ -0.25
SOX2-OT-216ENST00000497122 POTEIP0CG38 1075 aa13.44□□□□□ -0.26
SOX2-OT-216ENST00000497122 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-216ENST00000497122 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
SOX2-OT-216ENST00000497122 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms