RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 RYR1P21817 5038 aa4.78□□□□□ -1.64
GAPVD1-219ENST00000495955 PLAC4Q8WY50 150 aa4.78□□□□□ -1.64
GAPVD1-219ENST00000495955 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
GAPVD1-219ENST00000495955 VPS13BQ7Z7G8 4022 aa4.76□□□□□ -1.65
GAPVD1-219ENST00000495955 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
GAPVD1-219ENST00000495955 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
GAPVD1-219ENST00000495955 PKHD1P08F94 4074 aa4.74□□□□□ -1.65
GAPVD1-219ENST00000495955 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
GAPVD1-219ENST00000495955 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
GAPVD1-219ENST00000495955 PKD1P98161 4303 aa4.72□□□□□ -1.65
GAPVD1-219ENST00000495955 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.66
GAPVD1-219ENST00000495955 HSPG2P98160 4391 aa4.71□□□□□ -1.66
GAPVD1-219ENST00000495955 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
GAPVD1-219ENST00000495955 Q5VV11 94 aa4.65□□□□□ -1.67
GAPVD1-219ENST00000495955 EPPK1P58107 5090 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-219ENST00000495955 HERC2O95714 4834 aa4.6□□□□□ -1.67
GAPVD1-219ENST00000495955 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
GAPVD1-219ENST00000495955 LRP1Q07954 4544 aaKnown RBP4.59□□□□□ -1.67
GAPVD1-219ENST00000495955 A8MU10 97 aa4.58□□□□□ -1.68
GAPVD1-219ENST00000495955 P0C880 135 aa4.55□□□□□ -1.68
GAPVD1-219ENST00000495955 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.69
GAPVD1-219ENST00000495955 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
GAPVD1-219ENST00000495955 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
GAPVD1-219ENST00000495955 H3BS24 57 aa4.48□□□□□ -1.69
GAPVD1-219ENST00000495955 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
GAPVD1-219ENST00000495955 ROMO1P60602 79 aa4.45□□□□□ -1.7
GAPVD1-219ENST00000495955 H0YAA0 97 aa4.44□□□□□ -1.7
GAPVD1-219ENST00000495955 ABCA13Q86UQ4 5058 aa4.43□□□□□ -1.7
GAPVD1-219ENST00000495955 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
GAPVD1-219ENST00000495955 MT1HP80294 61 aa4.39□□□□□ -1.71
GAPVD1-219ENST00000495955 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
GAPVD1-219ENST00000495955 TNXBP22105 4242 aa4.38□□□□□ -1.71
GAPVD1-219ENST00000495955 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
GAPVD1-219ENST00000495955 TNP1P09430 55 aa4.37□□□□□ -1.71
GAPVD1-219ENST00000495955 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
GAPVD1-219ENST00000495955 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
GAPVD1-219ENST00000495955 LPAP08519 4548 aa4.31□□□□□ -1.72
GAPVD1-219ENST00000495955 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
GAPVD1-219ENST00000495955 HERC1Q15751 4861 aa4.3□□□□□ -1.72
GAPVD1-219ENST00000495955 A6NN06 94 aa4.28□□□□□ -1.72
GAPVD1-219ENST00000495955 LRP2P98164 4655 aa4.27□□□□□ -1.73
GAPVD1-219ENST00000495955 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
GAPVD1-219ENST00000495955 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
GAPVD1-219ENST00000495955 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
GAPVD1-219ENST00000495955 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
GAPVD1-219ENST00000495955 MT2AP02795 61 aa4.21□□□□□ -1.74
GAPVD1-219ENST00000495955 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-219ENST00000495955 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
GAPVD1-219ENST00000495955 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
GAPVD1-219ENST00000495955 MT1FP04733 61 aa4.16□□□□□ -1.74
GAPVD1-219ENST00000495955 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
GAPVD1-219ENST00000495955 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
GAPVD1-219ENST00000495955 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
GAPVD1-219ENST00000495955 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
GAPVD1-219ENST00000495955 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
GAPVD1-219ENST00000495955 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
GAPVD1-219ENST00000495955 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
GAPVD1-219ENST00000495955 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
GAPVD1-219ENST00000495955 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
GAPVD1-219ENST00000495955 RNF213Q63HN8 5207 aa4□□□□□ -1.77
GAPVD1-219ENST00000495955 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
GAPVD1-219ENST00000495955 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
GAPVD1-219ENST00000495955 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
GAPVD1-219ENST00000495955 FAT4Q6V0I7 4981 aa3.92□□□□□ -1.78
GAPVD1-219ENST00000495955 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
GAPVD1-219ENST00000495955 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
GAPVD1-219ENST00000495955 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
GAPVD1-219ENST00000495955 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-219ENST00000495955 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
GAPVD1-219ENST00000495955 MUC2Q02817 5179 aa3.86□□□□□ -1.79
GAPVD1-219ENST00000495955 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
GAPVD1-219ENST00000495955 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
GAPVD1-219ENST00000495955 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
GAPVD1-219ENST00000495955 MT1BP07438 61 aa3.8□□□□□ -1.8
GAPVD1-219ENST00000495955 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
GAPVD1-219ENST00000495955 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
GAPVD1-219ENST00000495955 LCE2BO14633 110 aa3.79□□□□□ -1.8
GAPVD1-219ENST00000495955 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
GAPVD1-219ENST00000495955 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
GAPVD1-219ENST00000495955 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
GAPVD1-219ENST00000495955 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
GAPVD1-219ENST00000495955 MT1XP80297 61 aa3.71□□□□□ -1.81
GAPVD1-219ENST00000495955 FSIP2Q5CZC0 6907 aa3.68□□□□□ -1.82
GAPVD1-219ENST00000495955 KRTAP10-7P60409 375 aaPredicted RBP3.68□□□□□ -1.82
GAPVD1-219ENST00000495955 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
GAPVD1-219ENST00000495955 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.82
GAPVD1-219ENST00000495955 KRTAP19-6Q3LI70 58 aa3.62□□□□□ -1.83
GAPVD1-219ENST00000495955 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
GAPVD1-219ENST00000495955 SPRR2EP22531 72 aa3.57□□□□□ -1.84
GAPVD1-219ENST00000495955 SPRR2BP35325 72 aa3.57□□□□□ -1.84
GAPVD1-219ENST00000495955 SPRR2AP35326 72 aa3.57□□□□□ -1.84
GAPVD1-219ENST00000495955 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
GAPVD1-219ENST00000495955 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
GAPVD1-219ENST00000495955 SPRR2DP22532 72 aa3.45□□□□□ -1.86
GAPVD1-219ENST00000495955 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
GAPVD1-219ENST00000495955 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
GAPVD1-219ENST00000495955 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
GAPVD1-219ENST00000495955 USH2AO75445 5202 aa3.36□□□□□ -1.87
GAPVD1-219ENST00000495955 MT1GP13640 62 aa3.34□□□□□ -1.88
GAPVD1-219ENST00000495955 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms