RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
RPSA-209ENST00000495394 PKD1P98161 4303 aa4.98□□□□□ -1.61
RPSA-209ENST00000495394 FLG2Q5D862 2391 aaPredicted RBP4.97□□□□□ -1.61
RPSA-209ENST00000495394 KRTAP10-2P60368 255 aa4.97□□□□□ -1.61
RPSA-209ENST00000495394 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
RPSA-209ENST00000495394 PRLHP81277 87 aa4.95□□□□□ -1.62
RPSA-209ENST00000495394 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
RPSA-209ENST00000495394 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
RPSA-209ENST00000495394 DYNC1H1Q14204 4646 aaKnown RBP4.93□□□□□ -1.62
RPSA-209ENST00000495394 SPRR1BP22528 89 aa4.92□□□□□ -1.62
RPSA-209ENST00000495394 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
RPSA-209ENST00000495394 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
RPSA-209ENST00000495394 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
RPSA-209ENST00000495394 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.62
RPSA-209ENST00000495394 KRTAP10-1P60331 282 aa4.9□□□□□ -1.63
RPSA-209ENST00000495394 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
RPSA-209ENST00000495394 DNAH5Q8TE73 4624 aa4.89□□□□□ -1.63
RPSA-209ENST00000495394 KRTAP13-3Q3SY46 172 aa4.88□□□□□ -1.63
RPSA-209ENST00000495394 KRTAP13-1Q8IUC0 172 aa4.88□□□□□ -1.63
RPSA-209ENST00000495394 HERC1Q15751 4861 aa4.87□□□□□ -1.63
RPSA-209ENST00000495394 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
RPSA-209ENST00000495394 HSPG2P98160 4391 aa4.85□□□□□ -1.63
RPSA-209ENST00000495394 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
RPSA-209ENST00000495394 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
RPSA-209ENST00000495394 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
RPSA-209ENST00000495394 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
RPSA-209ENST00000495394 XP32Q5T750 250 aa4.81□□□□□ -1.64
RPSA-209ENST00000495394 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
RPSA-209ENST00000495394 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
RPSA-209ENST00000495394 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
RPSA-209ENST00000495394 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
RPSA-209ENST00000495394 Q5VSD8 79 aa4.74□□□□□ -1.65
RPSA-209ENST00000495394 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
RPSA-209ENST00000495394 IGKV2-30P06310 120 aa4.72□□□□□ -1.65
RPSA-209ENST00000495394 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
RPSA-209ENST00000495394 FAT1Q14517 4588 aa4.69□□□□□ -1.66
RPSA-209ENST00000495394 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
RPSA-209ENST00000495394 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.67
RPSA-209ENST00000495394 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
RPSA-209ENST00000495394 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
RPSA-209ENST00000495394 HMCN2Q8NDA2 5059 aa4.61□□□□□ -1.67
RPSA-209ENST00000495394 SPINK1P00995 79 aa4.6□□□□□ -1.67
RPSA-209ENST00000495394 KRTAP13-2Q52LG2 175 aa4.59□□□□□ -1.67
RPSA-209ENST00000495394 PKHD1L1Q86WI1 4243 aa4.59□□□□□ -1.67
RPSA-209ENST00000495394 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
RPSA-209ENST00000495394 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
RPSA-209ENST00000495394 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
RPSA-209ENST00000495394 MT1HL1P0DM35 61 aa4.51□□□□□ -1.69
RPSA-209ENST00000495394 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
RPSA-209ENST00000495394 S4R3F8 94 aa4.5□□□□□ -1.69
RPSA-209ENST00000495394 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
RPSA-209ENST00000495394 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
RPSA-209ENST00000495394 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
RPSA-209ENST00000495394 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
RPSA-209ENST00000495394 TNXBP22105 4242 aa4.45□□□□□ -1.7
RPSA-209ENST00000495394 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
RPSA-209ENST00000495394 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
RPSA-209ENST00000495394 A0A0D9SG42 100 aa4.37□□□□□ -1.71
RPSA-209ENST00000495394 LRP2P98164 4655 aa4.33□□□□□ -1.72
RPSA-209ENST00000495394 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
RPSA-209ENST00000495394 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
RPSA-209ENST00000495394 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.73
RPSA-209ENST00000495394 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
RPSA-209ENST00000495394 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
RPSA-209ENST00000495394 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
RPSA-209ENST00000495394 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
RPSA-209ENST00000495394 LPAP08519 4548 aa4.2□□□□□ -1.74
RPSA-209ENST00000495394 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
RPSA-209ENST00000495394 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
RPSA-209ENST00000495394 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
RPSA-209ENST00000495394 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
RPSA-209ENST00000495394 KRTAP19-1Q8IUB9 90 aa4.16□□□□□ -1.74
RPSA-209ENST00000495394 MUC2Q02817 5179 aa4.14□□□□□ -1.75
RPSA-209ENST00000495394 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
RPSA-209ENST00000495394 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.76
RPSA-209ENST00000495394 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
RPSA-209ENST00000495394 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
RPSA-209ENST00000495394 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
RPSA-209ENST00000495394 M0QZ58 72 aa3.99□□□□□ -1.77
RPSA-209ENST00000495394 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
RPSA-209ENST00000495394 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
RPSA-209ENST00000495394 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
RPSA-209ENST00000495394 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
RPSA-209ENST00000495394 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
RPSA-209ENST00000495394 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
RPSA-209ENST00000495394 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
RPSA-209ENST00000495394 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
RPSA-209ENST00000495394 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
RPSA-209ENST00000495394 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
RPSA-209ENST00000495394 MT1HP80294 61 aa3.82□□□□□ -1.8
RPSA-209ENST00000495394 M0R2T5 61 aa3.77□□□□□ -1.81
RPSA-209ENST00000495394 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
RPSA-209ENST00000495394 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
RPSA-209ENST00000495394 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
RPSA-209ENST00000495394 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
RPSA-209ENST00000495394 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
RPSA-209ENST00000495394 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
RPSA-209ENST00000495394 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
RPSA-209ENST00000495394 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
RPSA-209ENST00000495394 MT2AP02795 61 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms