RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
CACUL1-206ENST00000493518 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
CACUL1-206ENST00000493518 KRTAP13-4Q3LI77 160 aa8.07□□□□□ -1.12
CACUL1-206ENST00000493518 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
CACUL1-206ENST00000493518 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
CACUL1-206ENST00000493518 P0C880 135 aa8.02□□□□□ -1.13
CACUL1-206ENST00000493518 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
CACUL1-206ENST00000493518 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
CACUL1-206ENST00000493518 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
CACUL1-206ENST00000493518 Q5VSD8 79 aa7.99□□□□□ -1.13
CACUL1-206ENST00000493518 S4R3F8 94 aa7.99□□□□□ -1.13
CACUL1-206ENST00000493518 LPAP08519 4548 aa7.98□□□□□ -1.13
CACUL1-206ENST00000493518 KRTAP10-6P60371 365 aaPredicted RBP7.97□□□□□ -1.13
CACUL1-206ENST00000493518 ROMO1P60602 79 aa7.97□□□□□ -1.13
CACUL1-206ENST00000493518 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.13
CACUL1-206ENST00000493518 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
CACUL1-206ENST00000493518 XP32Q5T750 250 aa7.94□□□□□ -1.14
CACUL1-206ENST00000493518 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
CACUL1-206ENST00000493518 RYR2Q92736 4967 aa7.92□□□□□ -1.14
CACUL1-206ENST00000493518 LRP2P98164 4655 aa7.92□□□□□ -1.14
CACUL1-206ENST00000493518 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
CACUL1-206ENST00000493518 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
CACUL1-206ENST00000493518 RYR3Q15413 4870 aa7.84□□□□□ -1.15
CACUL1-206ENST00000493518 TNXBP22105 4242 aa7.84□□□□□ -1.15
CACUL1-206ENST00000493518 RYR1P21817 5038 aa7.83□□□□□ -1.16
CACUL1-206ENST00000493518 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
CACUL1-206ENST00000493518 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
CACUL1-206ENST00000493518 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
CACUL1-206ENST00000493518 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
CACUL1-206ENST00000493518 M0QZ58 72 aa7.63□□□□□ -1.19
CACUL1-206ENST00000493518 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
CACUL1-206ENST00000493518 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
CACUL1-206ENST00000493518 R4GN34 69 aa7.57□□□□□ -1.2
CACUL1-206ENST00000493518 EPPK1P58107 5090 aaKnown RBP7.56□□□□□ -1.2
CACUL1-206ENST00000493518 MUC2Q02817 5179 aa7.52□□□□□ -1.21
CACUL1-206ENST00000493518 KRTAP4-5Q9BYR2 181 aa7.49□□□□□ -1.21
CACUL1-206ENST00000493518 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.22
CACUL1-206ENST00000493518 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
CACUL1-206ENST00000493518 J3QL48 77 aa7.32□□□□□ -1.24
CACUL1-206ENST00000493518 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
CACUL1-206ENST00000493518 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
CACUL1-206ENST00000493518 SEC61BP60468 96 aaKnown RBP7.23□□□□□ -1.25
CACUL1-206ENST00000493518 HERC2O95714 4834 aa7.2□□□□□ -1.26
CACUL1-206ENST00000493518 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
CACUL1-206ENST00000493518 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
CACUL1-206ENST00000493518 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
CACUL1-206ENST00000493518 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
CACUL1-206ENST00000493518 HERC1Q15751 4861 aa7.04□□□□□ -1.28
CACUL1-206ENST00000493518 PCLOQ9Y6V0 5065 aa6.97□□□□□ -1.29
CACUL1-206ENST00000493518 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
CACUL1-206ENST00000493518 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
CACUL1-206ENST00000493518 M0R2T5 61 aa6.88□□□□□ -1.31
CACUL1-206ENST00000493518 KRTAP19-2Q3LHN2 52 aa6.84□□□□□ -1.31
CACUL1-206ENST00000493518 TNP1P09430 55 aa6.82□□□□□ -1.32
CACUL1-206ENST00000493518 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
CACUL1-206ENST00000493518 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CACUL1-206ENST00000493518 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
CACUL1-206ENST00000493518 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
CACUL1-206ENST00000493518 HMCN2Q8NDA2 5059 aa6.7□□□□□ -1.34
CACUL1-206ENST00000493518 KRTAP10-10P60014 251 aa6.59□□□□□ -1.36
CACUL1-206ENST00000493518 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
CACUL1-206ENST00000493518 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
CACUL1-206ENST00000493518 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
CACUL1-206ENST00000493518 MT1FP04733 61 aa6.4□□□□□ -1.38
CACUL1-206ENST00000493518 MT1HP80294 61 aa6.38□□□□□ -1.39
CACUL1-206ENST00000493518 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
CACUL1-206ENST00000493518 MT2AP02795 61 aa6.34□□□□□ -1.39
CACUL1-206ENST00000493518 USH2AO75445 5202 aa6.34□□□□□ -1.39
CACUL1-206ENST00000493518 KMT2DO14686 5537 aa6.28□□□□□ -1.4
CACUL1-206ENST00000493518 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
CACUL1-206ENST00000493518 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.41
CACUL1-206ENST00000493518 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
CACUL1-206ENST00000493518 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
CACUL1-206ENST00000493518 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
CACUL1-206ENST00000493518 KRTAP10-7P60409 375 aaPredicted RBP6.13□□□□□ -1.43
CACUL1-206ENST00000493518 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
CACUL1-206ENST00000493518 MT1XP80297 61 aa6.12□□□□□ -1.43
CACUL1-206ENST00000493518 MT1BP07438 61 aa6.12□□□□□ -1.43
CACUL1-206ENST00000493518 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
CACUL1-206ENST00000493518 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
CACUL1-206ENST00000493518 KRTAP19-8Q3LI54 63 aa5.99□□□□□ -1.45
CACUL1-206ENST00000493518 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.47
CACUL1-206ENST00000493518 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
CACUL1-206ENST00000493518 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
CACUL1-206ENST00000493518 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
CACUL1-206ENST00000493518 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
CACUL1-206ENST00000493518 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
CACUL1-206ENST00000493518 LCE2BO14633 110 aa5.79□□□□□ -1.48
CACUL1-206ENST00000493518 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
CACUL1-206ENST00000493518 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
CACUL1-206ENST00000493518 INE1O15225 51 aa5.66□□□□□ -1.5
CACUL1-206ENST00000493518 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
CACUL1-206ENST00000493518 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
CACUL1-206ENST00000493518 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
CACUL1-206ENST00000493518 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
CACUL1-206ENST00000493518 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
CACUL1-206ENST00000493518 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
CACUL1-206ENST00000493518 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
CACUL1-206ENST00000493518 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
CACUL1-206ENST00000493518 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms