RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 NISCHQ9Y2I1 1504 aa30.33■■■□□ 2.45
CACUL1-206ENST00000493518 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
CACUL1-206ENST00000493518 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
CACUL1-206ENST00000493518 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
CACUL1-206ENST00000493518 PCGF6Q9BYE7 350 aa26.07■■□□□ 1.76
CACUL1-206ENST00000493518 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
CACUL1-206ENST00000493518 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
CACUL1-206ENST00000493518 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
CACUL1-206ENST00000493518 HRCP23327 699 aa25.78■■□□□ 1.72
CACUL1-206ENST00000493518 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
CACUL1-206ENST00000493518 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
CACUL1-206ENST00000493518 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
CACUL1-206ENST00000493518 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
CACUL1-206ENST00000493518 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
CACUL1-206ENST00000493518 TRIM26Q12899 539 aaPredicted RBP24.93■■□□□ 1.58
CACUL1-206ENST00000493518 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
CACUL1-206ENST00000493518 TTBK1Q5TCY1 1321 aaPredicted RBP24.75■■□□□ 1.55
CACUL1-206ENST00000493518 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
CACUL1-206ENST00000493518 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
CACUL1-206ENST00000493518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
CACUL1-206ENST00000493518 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
CACUL1-206ENST00000493518 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
CACUL1-206ENST00000493518 CCER1Q8TC90 406 aaPredicted RBP24.27■■□□□ 1.48
CACUL1-206ENST00000493518 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
CACUL1-206ENST00000493518 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
CACUL1-206ENST00000493518 ABCC9O60706 1549 aa24.18■■□□□ 1.46
CACUL1-206ENST00000493518 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
CACUL1-206ENST00000493518 RANGAP1P46060 587 aaPredicted RBP23.97■■□□□ 1.43
CACUL1-206ENST00000493518 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.42
CACUL1-206ENST00000493518 YTHDC1Q96MU7 727 aaKnown RBP23.88■■□□□ 1.41
CACUL1-206ENST00000493518 NEUROD1Q13562 356 aa23.87■■□□□ 1.41
CACUL1-206ENST00000493518 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
CACUL1-206ENST00000493518 DIEXFQ68CQ4 756 aaKnown RBP23.82■■□□□ 1.4
CACUL1-206ENST00000493518 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
CACUL1-206ENST00000493518 WIZO95785 1651 aa23.72■■□□□ 1.39
CACUL1-206ENST00000493518 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
CACUL1-206ENST00000493518 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
CACUL1-206ENST00000493518 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
CACUL1-206ENST00000493518 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
CACUL1-206ENST00000493518 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
CACUL1-206ENST00000493518 CENPBP07199 599 aaPredicted RBP23.57■■□□□ 1.36
CACUL1-206ENST00000493518 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
CACUL1-206ENST00000493518 SOGA1O94964 1423 aa23.54■■□□□ 1.36
CACUL1-206ENST00000493518 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
CACUL1-206ENST00000493518 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
CACUL1-206ENST00000493518 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
CACUL1-206ENST00000493518 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
CACUL1-206ENST00000493518 APLP2Q06481 763 aa23.35■■□□□ 1.33
CACUL1-206ENST00000493518 NACADO15069 1562 aa23.33■■□□□ 1.32
CACUL1-206ENST00000493518 MIER1Q8N108 512 aa23.32■■□□□ 1.32
CACUL1-206ENST00000493518 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
CACUL1-206ENST00000493518 ITGAEP38570 1179 aa23.19■■□□□ 1.3
CACUL1-206ENST00000493518 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
CACUL1-206ENST00000493518 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
CACUL1-206ENST00000493518 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
CACUL1-206ENST00000493518 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
CACUL1-206ENST00000493518 CLIP1P30622 1438 aa22.99■■□□□ 1.27
CACUL1-206ENST00000493518 GOLGA3Q08378 1498 aa22.99■■□□□ 1.27
CACUL1-206ENST00000493518 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
CACUL1-206ENST00000493518 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
CACUL1-206ENST00000493518 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
CACUL1-206ENST00000493518 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
CACUL1-206ENST00000493518 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
CACUL1-206ENST00000493518 EEA1Q15075 1411 aa22.81■■□□□ 1.24
CACUL1-206ENST00000493518 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
CACUL1-206ENST00000493518 BCANQ96GW7 911 aa22.76■■□□□ 1.23
CACUL1-206ENST00000493518 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
CACUL1-206ENST00000493518 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
CACUL1-206ENST00000493518 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
CACUL1-206ENST00000493518 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
CACUL1-206ENST00000493518 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
CACUL1-206ENST00000493518 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.2
CACUL1-206ENST00000493518 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
CACUL1-206ENST00000493518 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
CACUL1-206ENST00000493518 SUPT16HQ9Y5B9 1047 aaKnown RBP22.55■■□□□ 1.2
CACUL1-206ENST00000493518 DHX57Q6P158 1386 aaKnown RBP22.55■■□□□ 1.2
CACUL1-206ENST00000493518 DDX10Q13206 875 aaKnown RBP22.52■■□□□ 1.2
CACUL1-206ENST00000493518 KIF21BO75037 1637 aa22.51■■□□□ 1.19
CACUL1-206ENST00000493518 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
CACUL1-206ENST00000493518 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
CACUL1-206ENST00000493518 BICRAQ9NZM4 1560 aa22.41■■□□□ 1.18
CACUL1-206ENST00000493518 TRIM52Q96A61 297 aa22.39■■□□□ 1.18
CACUL1-206ENST00000493518 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
CACUL1-206ENST00000493518 FKBP8Q14318 412 aa22.36■■□□□ 1.17
CACUL1-206ENST00000493518 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.16
CACUL1-206ENST00000493518 MYT1Q01538 1121 aa22.31■■□□□ 1.16
CACUL1-206ENST00000493518 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
CACUL1-206ENST00000493518 TSHZ2Q9NRE2 1034 aa22.27■■□□□ 1.16
CACUL1-206ENST00000493518 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
CACUL1-206ENST00000493518 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
CACUL1-206ENST00000493518 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
CACUL1-206ENST00000493518 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
CACUL1-206ENST00000493518 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
CACUL1-206ENST00000493518 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
CACUL1-206ENST00000493518 NEFLP07196 543 aa22.15■■□□□ 1.14
CACUL1-206ENST00000493518 TOP2BQ02880 1626 aa22.13■■□□□ 1.13
CACUL1-206ENST00000493518 CUX2O14529 1486 aa22.12■■□□□ 1.13
CACUL1-206ENST00000493518 ARHGAP35Q9NRY4 1499 aa22.12■■□□□ 1.13
CACUL1-206ENST00000493518 CUX1P39880 1505 aa22.1■■□□□ 1.13
CACUL1-206ENST00000493518 ANP32CO43423 234 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms