RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 EPG5Q9HCE0 2579 aa1.42□□□□□ -2.18
UBXN4-208ENST00000490163 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 SPRR1BP22528 89 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 DEFB135Q30KP9 77 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 SETD2Q9BYW2 2564 aaPredicted RBP1.41□□□□□ -2.18
UBXN4-208ENST00000490163 HIVEP1P15822 2718 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 DYNC1H1Q14204 4646 aaKnown RBP1.41□□□□□ -2.18
UBXN4-208ENST00000490163 PLECQ15149 4684 aaKnown RBP1.41□□□□□ -2.18
UBXN4-208ENST00000490163 SPINK6Q6UWN8 80 aa1.41□□□□□ -2.18
UBXN4-208ENST00000490163 VPS13BQ7Z7G8 4022 aa1.4□□□□□ -2.18
UBXN4-208ENST00000490163 ABCA12Q86UK0 2595 aa1.4□□□□□ -2.18
UBXN4-208ENST00000490163 FBN1P35555 2871 aaKnown RBP1.4□□□□□ -2.18
UBXN4-208ENST00000490163 SACSQ9NZJ4 4579 aa1.4□□□□□ -2.18
UBXN4-208ENST00000490163 COL12A1Q99715 3063 aa1.4□□□□□ -2.19
UBXN4-208ENST00000490163 HELZ2Q9BYK8 2649 aaKnown RBP1.4□□□□□ -2.19
UBXN4-208ENST00000490163 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-208ENST00000490163 Q96NJ1 140 aa1.4□□□□□ -2.19
UBXN4-208ENST00000490163 TEP1Q99973 2627 aaKnown RBP1.39□□□□□ -2.19
UBXN4-208ENST00000490163 H0YAA0 97 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 H3BNG1 76 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 ITPR2Q14571 2701 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 TEX15Q9BXT5 2789 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 LINC01556Q5JQF7 62 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 NF1P21359 2839 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 FLNAP21333 2647 aaKnown RBP1.39□□□□□ -2.19
UBXN4-208ENST00000490163 ZANQ9Y493 2812 aa1.39□□□□□ -2.19
UBXN4-208ENST00000490163 RYR2Q92736 4967 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 NBDYA0A0U1RRE5 68 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 H1FX-AS1Q4G0G2 97 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 NOTCH2Q04721 2471 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 LRRK2Q5S007 2527 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 Q6ZSA8 131 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 DNAH5Q8TE73 4624 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 KMT2AQ03164 3969 aa1.38□□□□□ -2.19
UBXN4-208ENST00000490163 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
UBXN4-208ENST00000490163 MAST4O15021 2626 aa1.37□□□□□ -2.19
UBXN4-208ENST00000490163 ACANP16112 2415 aa1.37□□□□□ -2.19
UBXN4-208ENST00000490163 DMBT1Q9UGM3 2413 aaPredicted RBP1.36□□□□□ -2.19
UBXN4-208ENST00000490163 POLQO75417 2590 aa1.36□□□□□ -2.19
UBXN4-208ENST00000490163 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
UBXN4-208ENST00000490163 FASNP49327 2511 aaKnown RBP1.36□□□□□ -2.19
UBXN4-208ENST00000490163 HYDINQ4G0P3 5121 aa1.36□□□□□ -2.19
UBXN4-208ENST00000490163 CENPEQ02224 2701 aa1.35□□□□□ -2.19
UBXN4-208ENST00000490163 RPL37P61927 97 aaKnown RBP1.35□□□□□ -2.19
UBXN4-208ENST00000490163 SETXQ7Z333 2677 aaKnown RBP1.35□□□□□ -2.19
UBXN4-208ENST00000490163 NBEAL2Q6ZNJ1 2754 aa1.35□□□□□ -2.19
UBXN4-208ENST00000490163 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
UBXN4-208ENST00000490163 FBN3Q75N90 2809 aa1.35□□□□□ -2.19
UBXN4-208ENST00000490163 C10orf95Q9H7T3 257 aa1.34□□□□□ -2.19
UBXN4-208ENST00000490163 APLNQ9ULZ1 77 aa1.34□□□□□ -2.19
UBXN4-208ENST00000490163 HSPG2P98160 4391 aa1.34□□□□□ -2.19
UBXN4-208ENST00000490163 FAT1Q14517 4588 aa1.34□□□□□ -2.2
UBXN4-208ENST00000490163 NEBP20929 6669 aa1.34□□□□□ -2.2
UBXN4-208ENST00000490163 MEGF8Q7Z7M0 2845 aa1.34□□□□□ -2.2
UBXN4-208ENST00000490163 COL7A1Q02388 2944 aa1.34□□□□□ -2.2
UBXN4-208ENST00000490163 Q6ZRN7 208 aaPredicted RBP1.33□□□□□ -2.2
UBXN4-208ENST00000490163 COX6B2Q6YFQ2 88 aa1.33□□□□□ -2.2
UBXN4-208ENST00000490163 LRP1BQ9NZR2 4599 aa1.33□□□□□ -2.2
UBXN4-208ENST00000490163 TNXBP22105 4242 aa1.33□□□□□ -2.2
UBXN4-208ENST00000490163 VWFP04275 2813 aa1.32□□□□□ -2.2
UBXN4-208ENST00000490163 A0A0D9SG42 100 aa1.32□□□□□ -2.2
UBXN4-208ENST00000490163 INE1O15225 51 aa1.32□□□□□ -2.2
UBXN4-208ENST00000490163 RYR1P21817 5038 aa1.32□□□□□ -2.2
UBXN4-208ENST00000490163 PCLOQ9Y6V0 5065 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 HECTD1Q9ULT8 2610 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 KRTAP13-1Q8IUC0 172 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 NIPBLQ6KC79 2804 aaeCLIP1.31□□□□□ -2.21e-5■□□□□ 11.1
UBXN4-208ENST00000490163 PP632Q6XCG6 107 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 TENM2Q9NT68 2774 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
UBXN4-208ENST00000490163 RYR3Q15413 4870 aa1.3□□□□□ -2.2
UBXN4-208ENST00000490163 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
UBXN4-208ENST00000490163 UBE2DNLQ8IWF7 75 aa1.29□□□□□ -2.2
UBXN4-208ENST00000490163 MUC17Q685J3 4493 aa1.29□□□□□ -2.2
UBXN4-208ENST00000490163 PLAC4Q8WY50 150 aa1.29□□□□□ -2.2
UBXN4-208ENST00000490163 PKD1L1Q8TDX9 2849 aa1.29□□□□□ -2.2
UBXN4-208ENST00000490163 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
UBXN4-208ENST00000490163 S4R3F8 94 aa1.28□□□□□ -2.2
UBXN4-208ENST00000490163 ATRQ13535 2644 aa1.28□□□□□ -2.2
UBXN4-208ENST00000490163 STAB2Q8WWQ8 2551 aa1.28□□□□□ -2.21
UBXN4-208ENST00000490163 TENM3Q9P273 2699 aa1.27□□□□□ -2.21
UBXN4-208ENST00000490163 FLNBO75369 2602 aaKnown RBP1.27□□□□□ -2.21
UBXN4-208ENST00000490163 SRRM2Q9UQ35 2752 aaKnown RBP1.27□□□□□ -2.21
UBXN4-208ENST00000490163 KMT2CQ8NEZ4 4911 aaKnown RBP1.27□□□□□ -2.21
UBXN4-208ENST00000490163 KRTAP12-2P59991 146 aa1.26□□□□□ -2.21
UBXN4-208ENST00000490163 HERC2O95714 4834 aa1.26□□□□□ -2.21
UBXN4-208ENST00000490163 NOTCH1P46531 2555 aa1.25□□□□□ -2.21
UBXN4-208ENST00000490163 COL6A5A8TX70 2615 aa1.25□□□□□ -2.21
UBXN4-208ENST00000490163 BIRC6Q9NR09 4857 aa1.25□□□□□ -2.21
UBXN4-208ENST00000490163 TGP01266 2768 aa1.25□□□□□ -2.21
UBXN4-208ENST00000490163 NBEAL1Q6ZS30 2694 aa1.24□□□□□ -2.21
UBXN4-208ENST00000490163 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
UBXN4-208ENST00000490163 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
UBXN4-208ENST00000490163 MGAM2Q2M2H8 2515 aa1.22□□□□□ -2.21
UBXN4-208ENST00000490163 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
UBXN4-208ENST00000490163 STAB1Q9NY15 2570 aa1.22□□□□□ -2.21
UBXN4-208ENST00000490163 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms