RNA–Protein interactions for RNA: ENST00000488729.5

KIDINS220-208, Transcript of kinase D interacting substrate 220, humanhuman

TSL 1 (best)

Gene KIDINS220, Length 5,988 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIDINS220-208ENST00000488729 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
KIDINS220-208ENST00000488729 PKD1P98161 4303 aa2.95□□□□□ -1.94
KIDINS220-208ENST00000488729 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
KIDINS220-208ENST00000488729 RYR3Q15413 4870 aa2.92□□□□□ -1.94
KIDINS220-208ENST00000488729 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
KIDINS220-208ENST00000488729 KMT2AQ03164 3969 aa2.9□□□□□ -1.94
KIDINS220-208ENST00000488729 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.95
KIDINS220-208ENST00000488729 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
KIDINS220-208ENST00000488729 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
KIDINS220-208ENST00000488729 DNAH11Q96DT5 4516 aa2.89□□□□□ -1.95
KIDINS220-208ENST00000488729 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
KIDINS220-208ENST00000488729 VPS13DQ5THJ4 4388 aa2.88□□□□□ -1.95
KIDINS220-208ENST00000488729 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
KIDINS220-208ENST00000488729 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
KIDINS220-208ENST00000488729 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
KIDINS220-208ENST00000488729 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
KIDINS220-208ENST00000488729 TGP01266 2768 aa2.85□□□□□ -1.95
KIDINS220-208ENST00000488729 KRTAP3-1Q9BYR8 98 aa2.84□□□□□ -1.95
KIDINS220-208ENST00000488729 SRRM2Q9UQ35 2752 aaKnown RBP2.84□□□□□ -1.96
KIDINS220-208ENST00000488729 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
KIDINS220-208ENST00000488729 A0A1B0GVY2 172 aa2.83□□□□□ -1.96
KIDINS220-208ENST00000488729 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
KIDINS220-208ENST00000488729 TENM3Q9P273 2699 aa2.81□□□□□ -1.96
KIDINS220-208ENST00000488729 DNAH17Q9UFH2 4485 aa2.8□□□□□ -1.96
KIDINS220-208ENST00000488729 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
KIDINS220-208ENST00000488729 DNAH5Q8TE73 4624 aa2.77□□□□□ -1.97
KIDINS220-208ENST00000488729 RYR2Q92736 4967 aa2.77□□□□□ -1.97
KIDINS220-208ENST00000488729 FAT3Q8TDW7 4589 aa2.76□□□□□ -1.97
KIDINS220-208ENST00000488729 RYR1P21817 5038 aa2.74□□□□□ -1.97
KIDINS220-208ENST00000488729 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
KIDINS220-208ENST00000488729 PCLOQ9Y6V0 5065 aa2.73□□□□□ -1.97
KIDINS220-208ENST00000488729 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
KIDINS220-208ENST00000488729 KRTAP3-2Q9BYR7 98 aa2.71□□□□□ -1.98
KIDINS220-208ENST00000488729 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
KIDINS220-208ENST00000488729 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
KIDINS220-208ENST00000488729 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
KIDINS220-208ENST00000488729 HSPG2P98160 4391 aa2.66□□□□□ -1.98
KIDINS220-208ENST00000488729 PKHD1L1Q86WI1 4243 aa2.66□□□□□ -1.98
KIDINS220-208ENST00000488729 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
KIDINS220-208ENST00000488729 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
KIDINS220-208ENST00000488729 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
KIDINS220-208ENST00000488729 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
KIDINS220-208ENST00000488729 TNXBP22105 4242 aa2.58□□□□□ -2
KIDINS220-208ENST00000488729 KRTAP10-4P60372 401 aaPredicted RBP2.58□□□□□ -2
KIDINS220-208ENST00000488729 DYNC1H1Q14204 4646 aaKnown RBP2.57□□□□□ -2
KIDINS220-208ENST00000488729 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
KIDINS220-208ENST00000488729 LCE3AQ5TA76 89 aa2.57□□□□□ -2
KIDINS220-208ENST00000488729 LPAP08519 4548 aa2.57□□□□□ -2
KIDINS220-208ENST00000488729 MUC2Q02817 5179 aa2.57□□□□□ -2
KIDINS220-208ENST00000488729 KRTAP10-12P60413 245 aa2.55□□□□□ -2
KIDINS220-208ENST00000488729 KRTAP4-5Q9BYR2 181 aa2.55□□□□□ -2
KIDINS220-208ENST00000488729 MT1HL1P0DM35 61 aa2.51□□□□□ -2.01
KIDINS220-208ENST00000488729 KIAA1109Q2LD37 5005 aa2.49□□□□□ -2.01
KIDINS220-208ENST00000488729 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
KIDINS220-208ENST00000488729 BIRC6Q9NR09 4857 aa2.48□□□□□ -2.01
KIDINS220-208ENST00000488729 HERC1Q15751 4861 aa2.48□□□□□ -2.01
KIDINS220-208ENST00000488729 FAT1Q14517 4588 aa2.46□□□□□ -2.02
KIDINS220-208ENST00000488729 KRTAP17-1Q9BYP8 105 aa2.43□□□□□ -2.02
KIDINS220-208ENST00000488729 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
KIDINS220-208ENST00000488729 LORP23490 312 aaPredicted RBP2.39□□□□□ -2.03
KIDINS220-208ENST00000488729 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
KIDINS220-208ENST00000488729 FAT4Q6V0I7 4981 aa2.39□□□□□ -2.03
KIDINS220-208ENST00000488729 HERC2O95714 4834 aa2.37□□□□□ -2.03
KIDINS220-208ENST00000488729 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
KIDINS220-208ENST00000488729 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
KIDINS220-208ENST00000488729 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.04
KIDINS220-208ENST00000488729 LRP2P98164 4655 aa2.33□□□□□ -2.04
KIDINS220-208ENST00000488729 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
KIDINS220-208ENST00000488729 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
KIDINS220-208ENST00000488729 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
KIDINS220-208ENST00000488729 MT3P25713 68 aa2.27□□□□□ -2.05
KIDINS220-208ENST00000488729 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
KIDINS220-208ENST00000488729 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
KIDINS220-208ENST00000488729 KRTAP4-1Q9BYQ7 146 aa2.2□□□□□ -2.06
KIDINS220-208ENST00000488729 MT1HP80294 61 aa2.16□□□□□ -2.06
KIDINS220-208ENST00000488729 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
KIDINS220-208ENST00000488729 KRTAP19-2Q3LHN2 52 aa2.12□□□□□ -2.07
KIDINS220-208ENST00000488729 USH2AO75445 5202 aa2.11□□□□□ -2.07
KIDINS220-208ENST00000488729 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
KIDINS220-208ENST00000488729 PRM1P04553 51 aa2.09□□□□□ -2.07
KIDINS220-208ENST00000488729 LCE2CQ5TA81 110 aa2.08□□□□□ -2.08
KIDINS220-208ENST00000488729 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
KIDINS220-208ENST00000488729 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
KIDINS220-208ENST00000488729 MT2AP02795 61 aa2.05□□□□□ -2.08
KIDINS220-208ENST00000488729 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
KIDINS220-208ENST00000488729 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.09
KIDINS220-208ENST00000488729 MT1FP04733 61 aa2.01□□□□□ -2.09
KIDINS220-208ENST00000488729 LCE2DQ5TA82 110 aaPredicted RBP2□□□□□ -2.09
KIDINS220-208ENST00000488729 KRTAP9-8Q9BYQ0 159 aa2□□□□□ -2.09
KIDINS220-208ENST00000488729 KRTAP19-1Q8IUB9 90 aa1.96□□□□□ -2.1
KIDINS220-208ENST00000488729 MT1GP13640 62 aa1.96□□□□□ -2.1
KIDINS220-208ENST00000488729 KRTAP9-2Q9BYQ4 174 aa1.95□□□□□ -2.1
KIDINS220-208ENST00000488729 KRTAP9-3Q9BYQ3 159 aa1.95□□□□□ -2.1
KIDINS220-208ENST00000488729 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
KIDINS220-208ENST00000488729 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
KIDINS220-208ENST00000488729 LCE2BO14633 110 aa1.91□□□□□ -2.1
KIDINS220-208ENST00000488729 KRTAP9-6A0A140TA67 174 aa1.88□□□□□ -2.11
KIDINS220-208ENST00000488729 MT1XP80297 61 aa1.88□□□□□ -2.11
KIDINS220-208ENST00000488729 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
KIDINS220-208ENST00000488729 MT1BP07438 61 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms