RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 DNAH7Q8WXX0 4024 aa1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 FLG2Q5D862 2391 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 BDP1A6H8Y1 2624 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 VWFP04275 2813 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH6Q9C0G6 4158 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 M0QZ58 72 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 HIVEP1P15822 2718 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 CFAP46Q8IYW2 2715 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
ECHDC1-217ENST00000488087 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
ECHDC1-217ENST00000488087 UNC79Q9P2D8 2635 aa1.53□□□□□ -2.17
ECHDC1-217ENST00000488087 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.17
ECHDC1-217ENST00000488087 F8P00451 2351 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 APLNQ9ULZ1 77 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 ZNF462Q96JM2 2506 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 NAV2Q8IVL1 2488 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 FBN2P35556 2912 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 ZANQ9Y493 2812 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 CUBNO60494 3623 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 EPG5Q9HCE0 2579 aa1.52□□□□□ -2.17
ECHDC1-217ENST00000488087 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
ECHDC1-217ENST00000488087 MUC6Q6W4X9 2439 aa1.51□□□□□ -2.17
ECHDC1-217ENST00000488087 CMYA5Q8N3K9 4069 aa1.51□□□□□ -2.17
ECHDC1-217ENST00000488087 CSMD3Q7Z407 3707 aa1.51□□□□□ -2.17
ECHDC1-217ENST00000488087 HUWE1Q7Z6Z7 4374 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 HECTD1Q9ULT8 2610 aa1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 USP9YO00507 2555 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 A0A0D9SG42 100 aa1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 MTORP42345 2549 aa1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 HECTD4Q9Y4D8 3996 aa1.5□□□□□ -2.17
ECHDC1-217ENST00000488087 PIEZO1Q92508 2521 aa1.49□□□□□ -2.17
ECHDC1-217ENST00000488087 UBE2DNLQ8IWF7 75 aa1.49□□□□□ -2.17
ECHDC1-217ENST00000488087 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-217ENST00000488087 PDZD2O15018 2839 aa1.48□□□□□ -2.17
ECHDC1-217ENST00000488087 LRRK2Q5S007 2527 aa1.48□□□□□ -2.17
ECHDC1-217ENST00000488087 CHD8Q9HCK8 2581 aa1.48□□□□□ -2.17
ECHDC1-217ENST00000488087 CENPEQ02224 2701 aa1.48□□□□□ -2.17
ECHDC1-217ENST00000488087 SONP18583 2426 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-217ENST00000488087 TTC28Q96AY4 2481 aa1.47□□□□□ -2.17
ECHDC1-217ENST00000488087 HELZ2Q9BYK8 2649 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-217ENST00000488087 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-217ENST00000488087 SMR3AQ99954 134 aa1.46□□□□□ -2.18
ECHDC1-217ENST00000488087 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
ECHDC1-217ENST00000488087 PKD1L1Q8TDX9 2849 aa1.45□□□□□ -2.18
ECHDC1-217ENST00000488087 ITPR3Q14573 2671 aa1.45□□□□□ -2.18
ECHDC1-217ENST00000488087 ZNF469Q96JG9 3925 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-217ENST00000488087 ACACBO00763 2458 aa1.45□□□□□ -2.18
ECHDC1-217ENST00000488087 CCDC168Q8NDH2 2452 aa1.45□□□□□ -2.18
ECHDC1-217ENST00000488087 TGP01266 2768 aa1.44□□□□□ -2.18
ECHDC1-217ENST00000488087 PKD1L2Q7Z442 2459 aa1.44□□□□□ -2.18
ECHDC1-217ENST00000488087 SETD2Q9BYW2 2564 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-217ENST00000488087 DYNC1H1Q14204 4646 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-217ENST00000488087 LRP1BQ9NZR2 4599 aa1.44□□□□□ -2.18
ECHDC1-217ENST00000488087 NBEAL1Q6ZS30 2694 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 PKHD1L1Q86WI1 4243 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 POLQO75417 2590 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 ABCA12Q86UK0 2595 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
ECHDC1-217ENST00000488087 COL7A1Q02388 2944 aa1.42□□□□□ -2.18
ECHDC1-217ENST00000488087 Q5VSD8 79 aa1.42□□□□□ -2.18
ECHDC1-217ENST00000488087 ACANP16112 2415 aa1.42□□□□□ -2.18
ECHDC1-217ENST00000488087 KMT2AQ03164 3969 aa1.42□□□□□ -2.18
ECHDC1-217ENST00000488087 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
ECHDC1-217ENST00000488087 FLNCQ14315 2725 aa1.41□□□□□ -2.18
ECHDC1-217ENST00000488087 FLNAP21333 2647 aaKnown RBP1.41□□□□□ -2.18
ECHDC1-217ENST00000488087 FAM208BQ5VWN6 2430 aa1.4□□□□□ -2.18
ECHDC1-217ENST00000488087 FBN3Q75N90 2809 aa1.4□□□□□ -2.18
ECHDC1-217ENST00000488087 STARD9Q9P2P6 4700 aa1.4□□□□□ -2.18
ECHDC1-217ENST00000488087 ITPR2Q14571 2701 aa1.4□□□□□ -2.19
ECHDC1-217ENST00000488087 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
ECHDC1-217ENST00000488087 TEP1Q99973 2627 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-217ENST00000488087 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
ECHDC1-217ENST00000488087 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
ECHDC1-217ENST00000488087 HSPG2P98160 4391 aa1.38□□□□□ -2.19
ECHDC1-217ENST00000488087 C9orf92A6NGG3 77 aa1.38□□□□□ -2.19
ECHDC1-217ENST00000488087 MAST4O15021 2626 aa1.38□□□□□ -2.19
ECHDC1-217ENST00000488087 PKD1P98161 4303 aa1.38□□□□□ -2.19
ECHDC1-217ENST00000488087 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
ECHDC1-217ENST00000488087 IGSF10Q6WRI0 2623 aa1.37□□□□□ -2.19
ECHDC1-217ENST00000488087 MYO18BQ8IUG5 2567 aa1.37□□□□□ -2.19
ECHDC1-217ENST00000488087 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
ECHDC1-217ENST00000488087 TNXBP22105 4242 aa1.37□□□□□ -2.19
ECHDC1-217ENST00000488087 STAB2Q8WWQ8 2551 aa1.37□□□□□ -2.19
ECHDC1-217ENST00000488087 PKHD1P08F94 4074 aa1.36□□□□□ -2.19
ECHDC1-217ENST00000488087 FAT1Q14517 4588 aa1.36□□□□□ -2.19
ECHDC1-217ENST00000488087 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
ECHDC1-217ENST00000488087 NOTCH1P46531 2555 aa1.36□□□□□ -2.19
ECHDC1-217ENST00000488087 ATRQ13535 2644 aa1.35□□□□□ -2.19
ECHDC1-217ENST00000488087 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
ECHDC1-217ENST00000488087 FLNBO75369 2602 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-217ENST00000488087 TNP1P09430 55 aa1.34□□□□□ -2.19
ECHDC1-217ENST00000488087 CACNA1AO00555 2505 aa1.34□□□□□ -2.2
ECHDC1-217ENST00000488087 NSD1Q96L73 2696 aaPredicted RBP1.33□□□□□ -2.2
ECHDC1-217ENST00000488087 USP24Q9UPU5 2620 aa1.32□□□□□ -2.2
ECHDC1-217ENST00000488087 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
ECHDC1-217ENST00000488087 HERC1Q15751 4861 aa1.32□□□□□ -2.2
ECHDC1-217ENST00000488087 DMBT1Q9UGM3 2413 aaPredicted RBP1.31□□□□□ -2.2
ECHDC1-217ENST00000488087 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms