RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 FLNAP21333 2647 aaKnown RBP0.64□□□□□ -2.31
RC3H1-205ENST00000484867 TGP01266 2768 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 VCANP13611 3396 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 H3BUX3 64 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 M0QZ58 72 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 DEFB135Q30KP9 77 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 NSD1Q96L73 2696 aaPredicted RBP0.63□□□□□ -2.31
RC3H1-205ENST00000484867 CENPEQ02224 2701 aa0.63□□□□□ -2.31
RC3H1-205ENST00000484867 TENM4Q6N022 2769 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 NBPF19A0A087WUL8 3843 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 UNC80Q8N2C7 3258 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 TRIOO75962 3097 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 ADGRG4Q8IZF6 3080 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 SZT2Q5T011 3432 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 HRNRQ86YZ3 2850 aaPredicted RBP0.62□□□□□ -2.31
RC3H1-205ENST00000484867 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 M0R2T5 61 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 DEFB4AO15263 64 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 HTN3P15516 51 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 DEFB133Q30KQ1 61 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 DMXL2Q8TDJ6 3036 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 CFAP47Q6ZTR5 3102 aa0.62□□□□□ -2.31
RC3H1-205ENST00000484867 GOLGB1Q14789 3259 aaKnown RBP0.62□□□□□ -2.31
RC3H1-205ENST00000484867 MYO9AB2RTY4 2548 aa0.61□□□□□ -2.31
RC3H1-205ENST00000484867 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
RC3H1-205ENST00000484867 SPTBN5Q9NRC6 3674 aaKnown RBP0.61□□□□□ -2.31
RC3H1-205ENST00000484867 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 EYSQ5T1H1 3165 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 CEP295Q9C0D2 2601 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 CELSR3Q9NYQ7 3312 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 SPENQ96T58 3664 aaKnown RBP0.6□□□□□ -2.31
RC3H1-205ENST00000484867 RELNP78509 3460 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 FLNBO75369 2602 aaKnown RBP0.6□□□□□ -2.31
RC3H1-205ENST00000484867 DMDP11532 3685 aa0.6□□□□□ -2.31
RC3H1-205ENST00000484867 MUC3AQ02505 3323 aa0.59□□□□□ -2.31
RC3H1-205ENST00000484867 NIPBLQ6KC79 2804 aaeCLIP0.59□□□□□ -2.31
RC3H1-205ENST00000484867 MGAM2Q2M2H8 2515 aa0.59□□□□□ -2.31
RC3H1-205ENST00000484867 H3BNG1 76 aa0.59□□□□□ -2.31
RC3H1-205ENST00000484867 TNP1P09430 55 aa0.59□□□□□ -2.31
RC3H1-205ENST00000484867 U3KQA8 63 aa0.59□□□□□ -2.31
RC3H1-205ENST00000484867 BRCA2P51587 3418 aa0.59□□□□□ -2.32
RC3H1-205ENST00000484867 LAMA2P24043 3122 aaKnown RBP0.59□□□□□ -2.32
RC3H1-205ENST00000484867 ANK2Q01484 3957 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 EP400Q96L91 3159 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 PRM1P04553 51 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 LINC01556Q5JQF7 62 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 ASPMQ8IZT6 3477 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 AKAP9Q99996 3911 aa0.58□□□□□ -2.32
RC3H1-205ENST00000484867 UBR4Q5T4S7 5183 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 VPS13BQ7Z7G8 4022 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 CENPFP49454 3210 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 SACSQ9NZJ4 4579 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 KMT2AQ03164 3969 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 DNAH3Q8TD57 4116 aa0.57□□□□□ -2.32
RC3H1-205ENST00000484867 DEFB124Q8NES8 71 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 LAMA1P25391 3075 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 MYCBP2O75592 4640 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 CUBNO60494 3623 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 SMG1Q96Q15 3661 aaKnown RBP0.56□□□□□ -2.32
RC3H1-205ENST00000484867 DNAH8Q96JB1 4490 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 USP34Q70CQ2 3546 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 SVEP1Q4LDE5 3571 aa0.56□□□□□ -2.32
RC3H1-205ENST00000484867 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
RC3H1-205ENST00000484867 FAT2Q9NYQ8 4349 aa0.55□□□□□ -2.32
RC3H1-205ENST00000484867 AHNAKQ09666 5890 aaKnown RBP0.55□□□□□ -2.32
RC3H1-205ENST00000484867 FREM2Q5SZK8 3169 aa0.55□□□□□ -2.32
RC3H1-205ENST00000484867 WDFY4Q6ZS81 3184 aa0.55□□□□□ -2.32
RC3H1-205ENST00000484867 TNXBP22105 4242 aa0.55□□□□□ -2.32
RC3H1-205ENST00000484867 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
RC3H1-205ENST00000484867 VPS13AQ96RL7 3174 aa0.54□□□□□ -2.32
RC3H1-205ENST00000484867 SPEGQ15772 3267 aa0.54□□□□□ -2.32
RC3H1-205ENST00000484867 DCHS1Q96JQ0 3298 aa0.54□□□□□ -2.32
RC3H1-205ENST00000484867 DYNC2H1Q8NCM8 4307 aaKnown RBP0.53□□□□□ -2.32
RC3H1-205ENST00000484867 Q9Y3F1 56 aa0.53□□□□□ -2.32
RC3H1-205ENST00000484867 LAMA3Q16787 3333 aa0.53□□□□□ -2.32
RC3H1-205ENST00000484867 CDH23Q9H251 3354 aa0.53□□□□□ -2.32
RC3H1-205ENST00000484867 PRKDCP78527 4128 aaKnown RBP0.53□□□□□ -2.32
RC3H1-205ENST00000484867 LAMA5O15230 3695 aa0.53□□□□□ -2.33
RC3H1-205ENST00000484867 DNAH14Q0VDD8 3507 aa0.52□□□□□ -2.33
RC3H1-205ENST00000484867 PCLOQ9Y6V0 5065 aa0.52□□□□□ -2.33
RC3H1-205ENST00000484867 DNAH7Q8WXX0 4024 aa0.51□□□□□ -2.33
RC3H1-205ENST00000484867 SMR3BP02814 79 aaPredicted RBP0.51□□□□□ -2.33
RC3H1-205ENST00000484867 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
RC3H1-205ENST00000484867 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
RC3H1-205ENST00000484867 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
RC3H1-205ENST00000484867 WDFY3Q8IZQ1 3526 aa0.5□□□□□ -2.33
RC3H1-205ENST00000484867 CSMD2Q7Z408 3487 aa0.5□□□□□ -2.33
RC3H1-205ENST00000484867 MUC2Q02817 5179 aa0.5□□□□□ -2.33
RC3H1-205ENST00000484867 HYDINQ4G0P3 5121 aa0.49□□□□□ -2.33
RC3H1-205ENST00000484867 KRTAP8-1Q8IUC2 63 aa0.49□□□□□ -2.33
RC3H1-205ENST00000484867 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
RC3H1-205ENST00000484867 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 DNHD1Q96M86 4753 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 LOC400499M0QZD8 3231 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 DNAH9Q9NYC9 4486 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 DNAH2Q9P225 4427 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 HECTD4Q9Y4D8 3996 aa0.48□□□□□ -2.33
RC3H1-205ENST00000484867 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms