RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
RC3H1-205ENST00000484867 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
RC3H1-205ENST00000484867 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
RC3H1-205ENST00000484867 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
RC3H1-205ENST00000484867 FOXD1Q16676 465 aa24.58■■□□□ 1.53
RC3H1-205ENST00000484867 PLPPR3Q6T4P5 718 aa23.25■■□□□ 1.31
RC3H1-205ENST00000484867 MSH5O43196 834 aa22.97■■□□□ 1.27
RC3H1-205ENST00000484867 PPP6R1Q9UPN7 881 aa22.95■■□□□ 1.26
RC3H1-205ENST00000484867 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
RC3H1-205ENST00000484867 ADRA2BP18089 450 aa22.81■■□□□ 1.24
RC3H1-205ENST00000484867 POTEDQ86YR6 584 aa22.63■■□□□ 1.21
RC3H1-205ENST00000484867 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
RC3H1-205ENST00000484867 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
RC3H1-205ENST00000484867 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
RC3H1-205ENST00000484867 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
RC3H1-205ENST00000484867 HOXD11P31277 338 aaPredicted RBP20.11■□□□□ 0.81
RC3H1-205ENST00000484867 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
RC3H1-205ENST00000484867 RNF216Q9NWF9 866 aaPredicted RBP19.89■□□□□ 0.77
RC3H1-205ENST00000484867 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
RC3H1-205ENST00000484867 CACNB1Q02641 598 aaPredicted RBP19.72■□□□□ 0.75
RC3H1-205ENST00000484867 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
RC3H1-205ENST00000484867 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
RC3H1-205ENST00000484867 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
RC3H1-205ENST00000484867 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
RC3H1-205ENST00000484867 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
RC3H1-205ENST00000484867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.641e-7■□□□□ 8.2
RC3H1-205ENST00000484867 KCNA4P22459 653 aa18.86■□□□□ 0.61
RC3H1-205ENST00000484867 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
RC3H1-205ENST00000484867 SLC4A2P04920 1241 aa18.53■□□□□ 0.56
RC3H1-205ENST00000484867 SPINK5Q9NQ38 1064 aaPredicted RBP18.46■□□□□ 0.55
RC3H1-205ENST00000484867 DSG3P32926 999 aa18.36■□□□□ 0.53
RC3H1-205ENST00000484867 CAPN15O75808 1086 aa18.32■□□□□ 0.52
RC3H1-205ENST00000484867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
RC3H1-205ENST00000484867 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
RC3H1-205ENST00000484867 APLP2Q06481 763 aa18.04■□□□□ 0.48
RC3H1-205ENST00000484867 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
RC3H1-205ENST00000484867 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
RC3H1-205ENST00000484867 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
RC3H1-205ENST00000484867 ABCB7O75027 752 aa17.92■□□□□ 0.46
RC3H1-205ENST00000484867 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
RC3H1-205ENST00000484867 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
RC3H1-205ENST00000484867 POTEHQ6S545 545 aa17.68■□□□□ 0.42
RC3H1-205ENST00000484867 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
RC3H1-205ENST00000484867 POLA2Q14181 598 aa17.57■□□□□ 0.4
RC3H1-205ENST00000484867 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
RC3H1-205ENST00000484867 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
RC3H1-205ENST00000484867 ZBTB22O15209 634 aa17.4■□□□□ 0.38
RC3H1-205ENST00000484867 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
RC3H1-205ENST00000484867 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
RC3H1-205ENST00000484867 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
RC3H1-205ENST00000484867 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
RC3H1-205ENST00000484867 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
RC3H1-205ENST00000484867 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
RC3H1-205ENST00000484867 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
RC3H1-205ENST00000484867 PIP4P2Q8N4L2 257 aa16.73■□□□□ 0.27
RC3H1-205ENST00000484867 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
RC3H1-205ENST00000484867 FBLN2P98095 1184 aa16.68■□□□□ 0.26
RC3H1-205ENST00000484867 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
RC3H1-205ENST00000484867 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
RC3H1-205ENST00000484867 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
RC3H1-205ENST00000484867 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
RC3H1-205ENST00000484867 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
RC3H1-205ENST00000484867 SSUH2Q9Y2M2 353 aa16.51■□□□□ 0.23
RC3H1-205ENST00000484867 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
RC3H1-205ENST00000484867 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
RC3H1-205ENST00000484867 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
RC3H1-205ENST00000484867 HAX1O00165 279 aa16.37■□□□□ 0.21
RC3H1-205ENST00000484867 EVX2Q03828 476 aa16.3■□□□□ 0.2
RC3H1-205ENST00000484867 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
RC3H1-205ENST00000484867 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
RC3H1-205ENST00000484867 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
RC3H1-205ENST00000484867 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
RC3H1-205ENST00000484867 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
RC3H1-205ENST00000484867 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
RC3H1-205ENST00000484867 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
RC3H1-205ENST00000484867 GABBR2O75899 941 aa15.87■□□□□ 0.13
RC3H1-205ENST00000484867 FARP1Q9Y4F1 1045 aaPredicted RBP15.85■□□□□ 0.13
RC3H1-205ENST00000484867 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
RC3H1-205ENST00000484867 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
RC3H1-205ENST00000484867 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
RC3H1-205ENST00000484867 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
RC3H1-205ENST00000484867 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
RC3H1-205ENST00000484867 CLCN6P51797 869 aa15.56■□□□□ 0.08
RC3H1-205ENST00000484867 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
RC3H1-205ENST00000484867 PROM2Q8N271 834 aa15.52■□□□□ 0.08
RC3H1-205ENST00000484867 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
RC3H1-205ENST00000484867 LHX8Q68G74 356 aa15.49■□□□□ 0.07
RC3H1-205ENST00000484867 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
RC3H1-205ENST00000484867 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
RC3H1-205ENST00000484867 DCBLD2Q96PD2 775 aa15.32■□□□□ 0.04
RC3H1-205ENST00000484867 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
RC3H1-205ENST00000484867 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
RC3H1-205ENST00000484867 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
RC3H1-205ENST00000484867 PELP1Q8IZL8 1130 aaKnown RBP15.11■□□□□ 0.01
RC3H1-205ENST00000484867 MS4A3Q96HJ5 214 aa15.09■□□□□ 0.01
RC3H1-205ENST00000484867 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
RC3H1-205ENST00000484867 POTEB2H3BUK9 544 aa15.08■□□□□ 0
RC3H1-205ENST00000484867 ASTLQ6HA08 431 aaPredicted RBP15.05■□□□□ -0
RC3H1-205ENST00000484867 TSPYL2Q9H2G4 693 aaPredicted RBP15.04■□□□□ -0
RC3H1-205ENST00000484867 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms