RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
RNF220-213ENST00000480686 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
RNF220-213ENST00000480686 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
RNF220-213ENST00000480686 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
RNF220-213ENST00000480686 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
RNF220-213ENST00000480686 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
RNF220-213ENST00000480686 XP32Q5T750 250 aa6.38□□□□□ -1.39
RNF220-213ENST00000480686 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
RNF220-213ENST00000480686 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
RNF220-213ENST00000480686 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.39
RNF220-213ENST00000480686 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
RNF220-213ENST00000480686 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
RNF220-213ENST00000480686 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
RNF220-213ENST00000480686 LRP1BQ9NZR2 4599 aa6.27□□□□□ -1.41
RNF220-213ENST00000480686 PKD1P98161 4303 aa6.23□□□□□ -1.41
RNF220-213ENST00000480686 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
RNF220-213ENST00000480686 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
RNF220-213ENST00000480686 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
RNF220-213ENST00000480686 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
RNF220-213ENST00000480686 FAT1Q14517 4588 aa6.1□□□□□ -1.43
RNF220-213ENST00000480686 TNP1P09430 55 aa6.03□□□□□ -1.44
RNF220-213ENST00000480686 DYNC1H1Q14204 4646 aaKnown RBP5.98□□□□□ -1.45
RNF220-213ENST00000480686 Q5VSD8 79 aa5.97□□□□□ -1.45
RNF220-213ENST00000480686 RYR3Q15413 4870 aa5.9□□□□□ -1.47
RNF220-213ENST00000480686 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
RNF220-213ENST00000480686 APOBP04114 4563 aaKnown RBP5.89□□□□□ -1.47
RNF220-213ENST00000480686 RYR2Q92736 4967 aa5.88□□□□□ -1.47
RNF220-213ENST00000480686 J3QL48 77 aa5.88□□□□□ -1.47
RNF220-213ENST00000480686 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
RNF220-213ENST00000480686 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
RNF220-213ENST00000480686 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
RNF220-213ENST00000480686 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
RNF220-213ENST00000480686 HSPG2P98160 4391 aa5.73□□□□□ -1.49
RNF220-213ENST00000480686 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
RNF220-213ENST00000480686 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
RNF220-213ENST00000480686 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
RNF220-213ENST00000480686 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
RNF220-213ENST00000480686 A0A1B0GVY2 172 aa5.68□□□□□ -1.5
RNF220-213ENST00000480686 LPAP08519 4548 aa5.66□□□□□ -1.5
RNF220-213ENST00000480686 INE1O15225 51 aa5.66□□□□□ -1.5
RNF220-213ENST00000480686 TNXBP22105 4242 aa5.65□□□□□ -1.5
RNF220-213ENST00000480686 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
RNF220-213ENST00000480686 RYR1P21817 5038 aa5.61□□□□□ -1.51
RNF220-213ENST00000480686 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
RNF220-213ENST00000480686 M0R2T5 61 aa5.57□□□□□ -1.52
RNF220-213ENST00000480686 LRP2P98164 4655 aa5.51□□□□□ -1.53
RNF220-213ENST00000480686 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
RNF220-213ENST00000480686 MUC2Q02817 5179 aa5.41□□□□□ -1.54
RNF220-213ENST00000480686 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.55
RNF220-213ENST00000480686 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
RNF220-213ENST00000480686 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
RNF220-213ENST00000480686 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
RNF220-213ENST00000480686 HERC2O95714 4834 aa5.26□□□□□ -1.57
RNF220-213ENST00000480686 HERC1Q15751 4861 aa5.24□□□□□ -1.57
RNF220-213ENST00000480686 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
RNF220-213ENST00000480686 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
RNF220-213ENST00000480686 KRTAP4-1Q9BYQ7 146 aa5.19□□□□□ -1.58
RNF220-213ENST00000480686 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
RNF220-213ENST00000480686 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
RNF220-213ENST00000480686 FAT4Q6V0I7 4981 aa5.1□□□□□ -1.59
RNF220-213ENST00000480686 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
RNF220-213ENST00000480686 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
RNF220-213ENST00000480686 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
RNF220-213ENST00000480686 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
RNF220-213ENST00000480686 UBR4Q5T4S7 5183 aa4.97□□□□□ -1.61
RNF220-213ENST00000480686 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
RNF220-213ENST00000480686 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
RNF220-213ENST00000480686 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
RNF220-213ENST00000480686 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
RNF220-213ENST00000480686 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
RNF220-213ENST00000480686 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
RNF220-213ENST00000480686 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
RNF220-213ENST00000480686 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
RNF220-213ENST00000480686 MT1FP04733 61 aa4.66□□□□□ -1.66
RNF220-213ENST00000480686 MT2AP02795 61 aa4.63□□□□□ -1.67
RNF220-213ENST00000480686 MT1XP80297 61 aa4.61□□□□□ -1.67
RNF220-213ENST00000480686 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
RNF220-213ENST00000480686 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
RNF220-213ENST00000480686 USH2AO75445 5202 aa4.55□□□□□ -1.68
RNF220-213ENST00000480686 MT1HP80294 61 aa4.53□□□□□ -1.68
RNF220-213ENST00000480686 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
RNF220-213ENST00000480686 MT1BP07438 61 aa4.49□□□□□ -1.69
RNF220-213ENST00000480686 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
RNF220-213ENST00000480686 KRTAP12-4P60329 112 aa4.46□□□□□ -1.69
RNF220-213ENST00000480686 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
RNF220-213ENST00000480686 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
RNF220-213ENST00000480686 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
RNF220-213ENST00000480686 KRTAP4-8A0A0G2JLE6 195 aa4.38□□□□□ -1.71
RNF220-213ENST00000480686 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
RNF220-213ENST00000480686 KMT2DO14686 5537 aa4.38□□□□□ -1.71
RNF220-213ENST00000480686 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
RNF220-213ENST00000480686 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
RNF220-213ENST00000480686 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
RNF220-213ENST00000480686 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
RNF220-213ENST00000480686 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
RNF220-213ENST00000480686 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
RNF220-213ENST00000480686 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
RNF220-213ENST00000480686 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
RNF220-213ENST00000480686 MT1GP13640 62 aa4.15□□□□□ -1.75
RNF220-213ENST00000480686 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms