RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 PELP1Q8IZL8 1130 aaKnown RBP21.4■■□□□ 1.02
RNF220-213ENST00000480686 HRCP23327 699 aa21.11■□□□□ 0.97
RNF220-213ENST00000480686 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
RNF220-213ENST00000480686 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
RNF220-213ENST00000480686 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
RNF220-213ENST00000480686 MYT1Q01538 1121 aa20.79■□□□□ 0.92
RNF220-213ENST00000480686 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
RNF220-213ENST00000480686 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.85
RNF220-213ENST00000480686 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
RNF220-213ENST00000480686 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
RNF220-213ENST00000480686 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
RNF220-213ENST00000480686 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.78
RNF220-213ENST00000480686 GTF3C3Q9Y5Q9 886 aa19.88■□□□□ 0.77
RNF220-213ENST00000480686 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
RNF220-213ENST00000480686 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
RNF220-213ENST00000480686 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
RNF220-213ENST00000480686 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
RNF220-213ENST00000480686 YTHDC1Q96MU7 727 aaKnown RBP19.72■□□□□ 0.75
RNF220-213ENST00000480686 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
RNF220-213ENST00000480686 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
RNF220-213ENST00000480686 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
RNF220-213ENST00000480686 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
RNF220-213ENST00000480686 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
RNF220-213ENST00000480686 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
RNF220-213ENST00000480686 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
RNF220-213ENST00000480686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
RNF220-213ENST00000480686 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
RNF220-213ENST00000480686 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
RNF220-213ENST00000480686 ERICH6Q7L0X2 663 aa19■□□□□ 0.63
RNF220-213ENST00000480686 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
RNF220-213ENST00000480686 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
RNF220-213ENST00000480686 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
RNF220-213ENST00000480686 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
RNF220-213ENST00000480686 BCANQ96GW7 911 aa18.81■□□□□ 0.6
RNF220-213ENST00000480686 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
RNF220-213ENST00000480686 MIER1Q8N108 512 aa18.71■□□□□ 0.59
RNF220-213ENST00000480686 NEFLP07196 543 aa18.67■□□□□ 0.58
RNF220-213ENST00000480686 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
RNF220-213ENST00000480686 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.56
RNF220-213ENST00000480686 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
RNF220-213ENST00000480686 TSHZ2Q9NRE2 1034 aa18.5■□□□□ 0.55
RNF220-213ENST00000480686 CLSPNQ9HAW4 1339 aa18.41■□□□□ 0.54
RNF220-213ENST00000480686 FKBP8Q14318 412 aa18.39■□□□□ 0.54
RNF220-213ENST00000480686 APLP2Q06481 763 aa18.34■□□□□ 0.53
RNF220-213ENST00000480686 ITGAEP38570 1179 aa18.29■□□□□ 0.52
RNF220-213ENST00000480686 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.51
RNF220-213ENST00000480686 RBM19Q9Y4C8 960 aaKnown RBP18.21■□□□□ 0.51
RNF220-213ENST00000480686 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
RNF220-213ENST00000480686 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
RNF220-213ENST00000480686 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
RNF220-213ENST00000480686 NBR1Q14596 966 aa18.15■□□□□ 0.5
RNF220-213ENST00000480686 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
RNF220-213ENST00000480686 DEKP35659 375 aaKnown RBP18.08■□□□□ 0.48
RNF220-213ENST00000480686 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
RNF220-213ENST00000480686 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
RNF220-213ENST00000480686 RTN4Q9NQC3 1192 aaKnown RBP18.05■□□□□ 0.48
RNF220-213ENST00000480686 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.48
RNF220-213ENST00000480686 TRIM52Q96A61 297 aa18■□□□□ 0.47
RNF220-213ENST00000480686 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
RNF220-213ENST00000480686 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
RNF220-213ENST00000480686 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
RNF220-213ENST00000480686 KCNH8Q96L42 1107 aa17.8■□□□□ 0.44
RNF220-213ENST00000480686 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
RNF220-213ENST00000480686 ANP32CO43423 234 aa17.79■□□□□ 0.44
RNF220-213ENST00000480686 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
RNF220-213ENST00000480686 ANP32AP39687 249 aaKnown RBP17.75■□□□□ 0.43
RNF220-213ENST00000480686 MSH5O43196 834 aa17.74■□□□□ 0.43
RNF220-213ENST00000480686 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
RNF220-213ENST00000480686 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
RNF220-213ENST00000480686 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
RNF220-213ENST00000480686 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
RNF220-213ENST00000480686 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
RNF220-213ENST00000480686 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
RNF220-213ENST00000480686 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
RNF220-213ENST00000480686 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
RNF220-213ENST00000480686 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
RNF220-213ENST00000480686 IL27Q8NEV9 243 aa17.57■□□□□ 0.4
RNF220-213ENST00000480686 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
RNF220-213ENST00000480686 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
RNF220-213ENST00000480686 GLIPR1L2Q4G1C9 344 aa17.53■□□□□ 0.4
RNF220-213ENST00000480686 LAS1LQ9Y4W2 734 aaKnown RBP17.5■□□□□ 0.39
RNF220-213ENST00000480686 NEFMP07197 916 aa17.46■□□□□ 0.39
RNF220-213ENST00000480686 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
RNF220-213ENST00000480686 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
RNF220-213ENST00000480686 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
RNF220-213ENST00000480686 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.37
RNF220-213ENST00000480686 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
RNF220-213ENST00000480686 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
RNF220-213ENST00000480686 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
RNF220-213ENST00000480686 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
RNF220-213ENST00000480686 PKNOX2Q96KN3 472 aa17.33■□□□□ 0.36
RNF220-213ENST00000480686 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
RNF220-213ENST00000480686 FAM50AQ14320 339 aaKnown RBP17.28■□□□□ 0.36
RNF220-213ENST00000480686 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
RNF220-213ENST00000480686 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
RNF220-213ENST00000480686 ARXQ96QS3 562 aa17.25■□□□□ 0.35
RNF220-213ENST00000480686 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
RNF220-213ENST00000480686 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
RNF220-213ENST00000480686 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
RNF220-213ENST00000480686 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms