RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
SLC1A4-203ENST00000480594 ALMS1Q8TCU4 4167 aa4.5□□□□□ -1.69
SLC1A4-203ENST00000480594 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
SLC1A4-203ENST00000480594 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
SLC1A4-203ENST00000480594 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
SLC1A4-203ENST00000480594 DNAH2Q9P225 4427 aa4.32□□□□□ -1.72
SLC1A4-203ENST00000480594 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
SLC1A4-203ENST00000480594 AKAP9Q99996 3911 aa4.31□□□□□ -1.72
SLC1A4-203ENST00000480594 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
SLC1A4-203ENST00000480594 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
SLC1A4-203ENST00000480594 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
SLC1A4-203ENST00000480594 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
SLC1A4-203ENST00000480594 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
SLC1A4-203ENST00000480594 DNAH11Q96DT5 4516 aa4.29□□□□□ -1.72
SLC1A4-203ENST00000480594 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
SLC1A4-203ENST00000480594 MT1HP80294 61 aa4.24□□□□□ -1.73
SLC1A4-203ENST00000480594 MT2AP02795 61 aa4.22□□□□□ -1.73
SLC1A4-203ENST00000480594 DNAH17Q9UFH2 4485 aa4.21□□□□□ -1.74
SLC1A4-203ENST00000480594 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
SLC1A4-203ENST00000480594 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
SLC1A4-203ENST00000480594 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
SLC1A4-203ENST00000480594 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
SLC1A4-203ENST00000480594 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
SLC1A4-203ENST00000480594 MT1FP04733 61 aa4.12□□□□□ -1.75
SLC1A4-203ENST00000480594 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
SLC1A4-203ENST00000480594 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
SLC1A4-203ENST00000480594 DNAH8Q96JB1 4490 aa4.09□□□□□ -1.75
SLC1A4-203ENST00000480594 FAT1Q14517 4588 aa4.08□□□□□ -1.76
SLC1A4-203ENST00000480594 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
SLC1A4-203ENST00000480594 SACSQ9NZJ4 4579 aa4.07□□□□□ -1.76
SLC1A4-203ENST00000480594 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SLC1A4-203ENST00000480594 DYNC2H1Q8NCM8 4307 aaKnown RBP4.03□□□□□ -1.76
SLC1A4-203ENST00000480594 LRP1BQ9NZR2 4599 aa4.01□□□□□ -1.77
SLC1A4-203ENST00000480594 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
SLC1A4-203ENST00000480594 STARD9Q9P2P6 4700 aa3.98□□□□□ -1.77
SLC1A4-203ENST00000480594 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
SLC1A4-203ENST00000480594 ANK2Q01484 3957 aa3.98□□□□□ -1.77
SLC1A4-203ENST00000480594 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
SLC1A4-203ENST00000480594 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
SLC1A4-203ENST00000480594 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
SLC1A4-203ENST00000480594 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
SLC1A4-203ENST00000480594 SPRR2EP22531 72 aa3.88□□□□□ -1.79
SLC1A4-203ENST00000480594 SPRR2BP35325 72 aa3.88□□□□□ -1.79
SLC1A4-203ENST00000480594 SPRR2AP35326 72 aa3.88□□□□□ -1.79
SLC1A4-203ENST00000480594 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
SLC1A4-203ENST00000480594 RYR1P21817 5038 aa3.86□□□□□ -1.79
SLC1A4-203ENST00000480594 MT1XP80297 61 aa3.86□□□□□ -1.79
SLC1A4-203ENST00000480594 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
SLC1A4-203ENST00000480594 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.79
SLC1A4-203ENST00000480594 FRAS1Q86XX4 4008 aa3.84□□□□□ -1.8
SLC1A4-203ENST00000480594 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
SLC1A4-203ENST00000480594 MT1BP07438 61 aa3.79□□□□□ -1.8
SLC1A4-203ENST00000480594 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SLC1A4-203ENST00000480594 DNAH6Q9C0G6 4158 aa3.79□□□□□ -1.8
SLC1A4-203ENST00000480594 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
SLC1A4-203ENST00000480594 LYSTQ99698 3801 aa3.78□□□□□ -1.8
SLC1A4-203ENST00000480594 LCE3BQ5TA77 95 aa3.78□□□□□ -1.81
SLC1A4-203ENST00000480594 SPRR2DP22532 72 aa3.76□□□□□ -1.81
SLC1A4-203ENST00000480594 DNAH7Q8WXX0 4024 aa3.76□□□□□ -1.81
SLC1A4-203ENST00000480594 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
SLC1A4-203ENST00000480594 KRTAP17-1Q9BYP8 105 aa3.74□□□□□ -1.81
SLC1A4-203ENST00000480594 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
SLC1A4-203ENST00000480594 MT1GP13640 62 aa3.72□□□□□ -1.81
SLC1A4-203ENST00000480594 RYR3Q15413 4870 aa3.71□□□□□ -1.81
SLC1A4-203ENST00000480594 LCE2BO14633 110 aa3.7□□□□□ -1.82
SLC1A4-203ENST00000480594 MYCBP2O75592 4640 aa3.69□□□□□ -1.82
SLC1A4-203ENST00000480594 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
SLC1A4-203ENST00000480594 HSPG2P98160 4391 aa3.68□□□□□ -1.82
SLC1A4-203ENST00000480594 HERC1Q15751 4861 aa3.67□□□□□ -1.82
SLC1A4-203ENST00000480594 RYR2Q92736 4967 aa3.65□□□□□ -1.82
SLC1A4-203ENST00000480594 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
SLC1A4-203ENST00000480594 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
SLC1A4-203ENST00000480594 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
SLC1A4-203ENST00000480594 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
SLC1A4-203ENST00000480594 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
SLC1A4-203ENST00000480594 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
SLC1A4-203ENST00000480594 KIAA1109Q2LD37 5005 aa3.54□□□□□ -1.84
SLC1A4-203ENST00000480594 MT1LQ93083 61 aa3.54□□□□□ -1.84
SLC1A4-203ENST00000480594 PKD1P98161 4303 aa3.52□□□□□ -1.85
SLC1A4-203ENST00000480594 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
SLC1A4-203ENST00000480594 MT1EP04732 61 aa3.48□□□□□ -1.85
SLC1A4-203ENST00000480594 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
SLC1A4-203ENST00000480594 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
SLC1A4-203ENST00000480594 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
SLC1A4-203ENST00000480594 LPAP08519 4548 aa3.46□□□□□ -1.86
SLC1A4-203ENST00000480594 HYDINQ4G0P3 5121 aa3.45□□□□□ -1.86
SLC1A4-203ENST00000480594 LRP2P98164 4655 aa3.42□□□□□ -1.86
SLC1A4-203ENST00000480594 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
SLC1A4-203ENST00000480594 HERC2O95714 4834 aa3.37□□□□□ -1.87
SLC1A4-203ENST00000480594 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
SLC1A4-203ENST00000480594 MT1MQ8N339 61 aa3.36□□□□□ -1.87
SLC1A4-203ENST00000480594 MT4P47944 62 aa3.36□□□□□ -1.87
SLC1A4-203ENST00000480594 PRM1P04553 51 aa3.33□□□□□ -1.88
SLC1A4-203ENST00000480594 MUC17Q685J3 4493 aa3.33□□□□□ -1.88
SLC1A4-203ENST00000480594 TNXBP22105 4242 aa3.33□□□□□ -1.88
SLC1A4-203ENST00000480594 MT3P25713 68 aa3.32□□□□□ -1.88
SLC1A4-203ENST00000480594 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
SLC1A4-203ENST00000480594 KMT2CQ8NEZ4 4911 aaKnown RBP3.3□□□□□ -1.88
SLC1A4-203ENST00000480594 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
SLC1A4-203ENST00000480594 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms