RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 A8MUN3 132 aa4.32□□□□□ -1.72
VMA21-203ENST00000477649 HRES1P13985 223 aa4.32□□□□□ -1.72
VMA21-203ENST00000477649 PRR4Q16378 134 aa4.32□□□□□ -1.72
VMA21-203ENST00000477649 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
VMA21-203ENST00000477649 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
VMA21-203ENST00000477649 FLG2Q5D862 2391 aaPredicted RBP4.31□□□□□ -1.72
VMA21-203ENST00000477649 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
VMA21-203ENST00000477649 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
VMA21-203ENST00000477649 RETNLBQ9BQ08 111 aa4.31□□□□□ -1.72
VMA21-203ENST00000477649 Q1T7F1 81 aa4.3□□□□□ -1.72
VMA21-203ENST00000477649 COA5Q86WW8 74 aa4.3□□□□□ -1.72
VMA21-203ENST00000477649 ATP11AUNQ6ZP68 121 aa4.29□□□□□ -1.72
VMA21-203ENST00000477649 TNXBP22105 4242 aa4.28□□□□□ -1.72
VMA21-203ENST00000477649 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
VMA21-203ENST00000477649 FAT3Q8TDW7 4589 aa4.26□□□□□ -1.73
VMA21-203ENST00000477649 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
VMA21-203ENST00000477649 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
VMA21-203ENST00000477649 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
VMA21-203ENST00000477649 SPINK7P58062 85 aa4.24□□□□□ -1.73
VMA21-203ENST00000477649 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
VMA21-203ENST00000477649 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
VMA21-203ENST00000477649 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
VMA21-203ENST00000477649 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
VMA21-203ENST00000477649 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
VMA21-203ENST00000477649 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
VMA21-203ENST00000477649 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
VMA21-203ENST00000477649 PRR15LQ9BU68 103 aa4.17□□□□□ -1.74
VMA21-203ENST00000477649 SEC61BP60468 96 aaKnown RBP4.14□□□□□ -1.75
VMA21-203ENST00000477649 PSPHP1O15172 72 aa4.13□□□□□ -1.75
VMA21-203ENST00000477649 Q5VV11 94 aa4.12□□□□□ -1.75
VMA21-203ENST00000477649 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
VMA21-203ENST00000477649 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
VMA21-203ENST00000477649 A0A1B0GU69 56 aa4.1□□□□□ -1.75
VMA21-203ENST00000477649 H3BS24 57 aa4.1□□□□□ -1.75
VMA21-203ENST00000477649 SEC61GP60059 68 aa4.1□□□□□ -1.75
VMA21-203ENST00000477649 RBM12B-AS1Q9P1G2 102 aa4.09□□□□□ -1.75
VMA21-203ENST00000477649 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
VMA21-203ENST00000477649 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
VMA21-203ENST00000477649 LRP2P98164 4655 aa4.06□□□□□ -1.76
VMA21-203ENST00000477649 A6NED7 52 aa4.06□□□□□ -1.76
VMA21-203ENST00000477649 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
VMA21-203ENST00000477649 H1FX-AS1Q4G0G2 97 aa4.05□□□□□ -1.76
VMA21-203ENST00000477649 UQCR11O14957 56 aa4.03□□□□□ -1.76
VMA21-203ENST00000477649 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
VMA21-203ENST00000477649 S4R3F8 94 aa4.03□□□□□ -1.76
VMA21-203ENST00000477649 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
VMA21-203ENST00000477649 LCA10Q71F78 164 aa3.98□□□□□ -1.77
VMA21-203ENST00000477649 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
VMA21-203ENST00000477649 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
VMA21-203ENST00000477649 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
VMA21-203ENST00000477649 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
VMA21-203ENST00000477649 A0A1B0GU33 70 aa3.94□□□□□ -1.78
VMA21-203ENST00000477649 LPAP08519 4548 aa3.93□□□□□ -1.78
VMA21-203ENST00000477649 H0YAA0 97 aa3.92□□□□□ -1.78
VMA21-203ENST00000477649 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
VMA21-203ENST00000477649 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
VMA21-203ENST00000477649 MUC2Q02817 5179 aa3.88□□□□□ -1.79
VMA21-203ENST00000477649 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
VMA21-203ENST00000477649 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
VMA21-203ENST00000477649 A8MU10 97 aa3.84□□□□□ -1.79
VMA21-203ENST00000477649 K7ERS5 55 aa3.84□□□□□ -1.79
VMA21-203ENST00000477649 M0QZ58 72 aa3.84□□□□□ -1.79
VMA21-203ENST00000477649 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
VMA21-203ENST00000477649 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
VMA21-203ENST00000477649 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
VMA21-203ENST00000477649 A6NN06 94 aa3.82□□□□□ -1.8
VMA21-203ENST00000477649 P0C880 135 aa3.79□□□□□ -1.8
VMA21-203ENST00000477649 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
VMA21-203ENST00000477649 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
VMA21-203ENST00000477649 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
VMA21-203ENST00000477649 R4GN34 69 aa3.73□□□□□ -1.81
VMA21-203ENST00000477649 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
VMA21-203ENST00000477649 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
VMA21-203ENST00000477649 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
VMA21-203ENST00000477649 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
VMA21-203ENST00000477649 A0A0D9SG42 100 aa3.68□□□□□ -1.82
VMA21-203ENST00000477649 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.82
VMA21-203ENST00000477649 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
VMA21-203ENST00000477649 M0R2T5 61 aa3.64□□□□□ -1.83
VMA21-203ENST00000477649 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
VMA21-203ENST00000477649 ROMO1P60602 79 aa3.64□□□□□ -1.83
VMA21-203ENST00000477649 MT1HP80294 61 aa3.63□□□□□ -1.83
VMA21-203ENST00000477649 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
VMA21-203ENST00000477649 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
VMA21-203ENST00000477649 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
VMA21-203ENST00000477649 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
VMA21-203ENST00000477649 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
VMA21-203ENST00000477649 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
VMA21-203ENST00000477649 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
VMA21-203ENST00000477649 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
VMA21-203ENST00000477649 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
VMA21-203ENST00000477649 MT2AP02795 61 aa3.51□□□□□ -1.85
VMA21-203ENST00000477649 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
VMA21-203ENST00000477649 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
VMA21-203ENST00000477649 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
VMA21-203ENST00000477649 PLAC4Q8WY50 150 aa3.49□□□□□ -1.85
VMA21-203ENST00000477649 MT1FP04733 61 aa3.47□□□□□ -1.85
VMA21-203ENST00000477649 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
VMA21-203ENST00000477649 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
VMA21-203ENST00000477649 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms