RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
VARS2-209ENST00000477288 KRTAP8-1Q8IUC2 63 aa7.86□□□□□ -1.15
VARS2-209ENST00000477288 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
VARS2-209ENST00000477288 ZNF469Q96JG9 3925 aaPredicted RBP7.85□□□□□ -1.15
VARS2-209ENST00000477288 ALMS1Q8TCU4 4167 aa7.84□□□□□ -1.16
VARS2-209ENST00000477288 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
VARS2-209ENST00000477288 CSMD3Q7Z407 3707 aa7.79□□□□□ -1.16
VARS2-209ENST00000477288 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
VARS2-209ENST00000477288 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
VARS2-209ENST00000477288 AKAP9Q99996 3911 aa7.71□□□□□ -1.17
VARS2-209ENST00000477288 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
VARS2-209ENST00000477288 DNAH1Q9P2D7 4330 aa7.64□□□□□ -1.19
VARS2-209ENST00000477288 DNAH11Q96DT5 4516 aa7.63□□□□□ -1.19
VARS2-209ENST00000477288 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
VARS2-209ENST00000477288 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
VARS2-209ENST00000477288 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
VARS2-209ENST00000477288 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
VARS2-209ENST00000477288 DNAH17Q9UFH2 4485 aa7.45□□□□□ -1.22
VARS2-209ENST00000477288 MT1HP80294 61 aa7.44□□□□□ -1.22
VARS2-209ENST00000477288 FAT1Q14517 4588 aa7.4□□□□□ -1.23
VARS2-209ENST00000477288 LRP1BQ9NZR2 4599 aa7.38□□□□□ -1.23
VARS2-209ENST00000477288 RYR1P21817 5038 aa7.36□□□□□ -1.23
VARS2-209ENST00000477288 STARD9Q9P2P6 4700 aa7.35□□□□□ -1.23
VARS2-209ENST00000477288 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
VARS2-209ENST00000477288 MT2AP02795 61 aa7.3□□□□□ -1.24
VARS2-209ENST00000477288 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.24
VARS2-209ENST00000477288 DNAH2Q9P225 4427 aa7.25□□□□□ -1.25
VARS2-209ENST00000477288 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
VARS2-209ENST00000477288 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.26
VARS2-209ENST00000477288 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
VARS2-209ENST00000477288 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
VARS2-209ENST00000477288 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
VARS2-209ENST00000477288 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
VARS2-209ENST00000477288 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.26
VARS2-209ENST00000477288 MT1FP04733 61 aa7.13□□□□□ -1.27
VARS2-209ENST00000477288 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
VARS2-209ENST00000477288 DNAH3Q8TD57 4116 aa7.09□□□□□ -1.28
VARS2-209ENST00000477288 APOBP04114 4563 aaKnown RBP7.05□□□□□ -1.28
VARS2-209ENST00000477288 ANK2Q01484 3957 aa7.03□□□□□ -1.28
VARS2-209ENST00000477288 LCE3CQ5T5A8 94 aa7.02□□□□□ -1.29
VARS2-209ENST00000477288 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
VARS2-209ENST00000477288 RYR3Q15413 4870 aa6.98□□□□□ -1.29
VARS2-209ENST00000477288 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
VARS2-209ENST00000477288 LYSTQ99698 3801 aa6.93□□□□□ -1.3
VARS2-209ENST00000477288 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
VARS2-209ENST00000477288 MYCBP2O75592 4640 aa6.92□□□□□ -1.3
VARS2-209ENST00000477288 SPRR2EP22531 72 aa6.92□□□□□ -1.3
VARS2-209ENST00000477288 SPRR2BP35325 72 aa6.92□□□□□ -1.3
VARS2-209ENST00000477288 SPRR2AP35326 72 aa6.92□□□□□ -1.3
VARS2-209ENST00000477288 RYR2Q92736 4967 aa6.81□□□□□ -1.32
VARS2-209ENST00000477288 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
VARS2-209ENST00000477288 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
VARS2-209ENST00000477288 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
VARS2-209ENST00000477288 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.33
VARS2-209ENST00000477288 SPRR2DP22532 72 aa6.7□□□□□ -1.34
VARS2-209ENST00000477288 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
VARS2-209ENST00000477288 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
VARS2-209ENST00000477288 HERC2O95714 4834 aa6.67□□□□□ -1.34
VARS2-209ENST00000477288 DNAH6Q9C0G6 4158 aa6.67□□□□□ -1.34
VARS2-209ENST00000477288 CMYA5Q8N3K9 4069 aa6.63□□□□□ -1.35
VARS2-209ENST00000477288 MT1GP13640 62 aa6.61□□□□□ -1.35
VARS2-209ENST00000477288 LCE2BO14633 110 aa6.59□□□□□ -1.35
VARS2-209ENST00000477288 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
VARS2-209ENST00000477288 HECTD4Q9Y4D8 3996 aa6.55□□□□□ -1.36
VARS2-209ENST00000477288 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
VARS2-209ENST00000477288 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
VARS2-209ENST00000477288 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
VARS2-209ENST00000477288 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
VARS2-209ENST00000477288 LRP2P98164 4655 aa6.5□□□□□ -1.37
VARS2-209ENST00000477288 MT1XP80297 61 aa6.48□□□□□ -1.37
VARS2-209ENST00000477288 MT1BP07438 61 aa6.46□□□□□ -1.37
VARS2-209ENST00000477288 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
VARS2-209ENST00000477288 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
VARS2-209ENST00000477288 PCLOQ9Y6V0 5065 aa6.45□□□□□ -1.38
VARS2-209ENST00000477288 HSPG2P98160 4391 aa6.41□□□□□ -1.38
VARS2-209ENST00000477288 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
VARS2-209ENST00000477288 PKD1P98161 4303 aa6.39□□□□□ -1.39
VARS2-209ENST00000477288 HERC1Q15751 4861 aa6.37□□□□□ -1.39
VARS2-209ENST00000477288 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
VARS2-209ENST00000477288 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
VARS2-209ENST00000477288 KRTAP9-3Q9BYQ3 159 aa6.34□□□□□ -1.39
VARS2-209ENST00000477288 PKHD1P08F94 4074 aa6.31□□□□□ -1.4
VARS2-209ENST00000477288 LCE3DQ9BYE3 92 aa6.3□□□□□ -1.4
VARS2-209ENST00000477288 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
VARS2-209ENST00000477288 LCE3EQ5T5B0 92 aa6.18□□□□□ -1.42
VARS2-209ENST00000477288 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
VARS2-209ENST00000477288 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
VARS2-209ENST00000477288 LPAP08519 4548 aa6.13□□□□□ -1.43
VARS2-209ENST00000477288 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
VARS2-209ENST00000477288 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.44
VARS2-209ENST00000477288 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
VARS2-209ENST00000477288 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
VARS2-209ENST00000477288 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
VARS2-209ENST00000477288 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
VARS2-209ENST00000477288 MT4P47944 62 aa5.98□□□□□ -1.45
VARS2-209ENST00000477288 TNXBP22105 4242 aa5.94□□□□□ -1.46
VARS2-209ENST00000477288 MT1LQ93083 61 aa5.94□□□□□ -1.46
VARS2-209ENST00000477288 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
VARS2-209ENST00000477288 MT1EP04732 61 aa5.88□□□□□ -1.47
VARS2-209ENST00000477288 LCE1BQ5T7P3 118 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms