RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 CENPEQ02224 2701 aa1.3□□□□□ -2.2
TMEM50B-208ENST00000474272 FN1P02751 2386 aaKnown RBP1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 LRRK2Q5S007 2527 aa1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 ABCA12Q86UK0 2595 aa1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 USP24Q9UPU5 2620 aa1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 DNAH17Q9UFH2 4485 aa1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 FLNAP21333 2647 aaKnown RBP1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
TMEM50B-208ENST00000474272 JMJD1CQ15652 2540 aa1.28□□□□□ -2.2
TMEM50B-208ENST00000474272 SPINK1P00995 79 aa1.28□□□□□ -2.2
TMEM50B-208ENST00000474272 SONP18583 2426 aaKnown RBP1.28□□□□□ -2.2
TMEM50B-208ENST00000474272 UNC79Q9P2D8 2635 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 LY6G6CO95867 125 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 Q6ZSA8 131 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 OTOGQ6ZRI0 2925 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 VWFP04275 2813 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 CCDC168Q8NDH2 2452 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 ACANP16112 2415 aa1.27□□□□□ -2.21
TMEM50B-208ENST00000474272 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 ITPR2Q14571 2701 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 TEP1Q99973 2627 aaKnown RBP1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 SPINK6Q6UWN8 80 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 TENM4Q6N022 2769 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 GCN1Q92616 2671 aaKnown RBP1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 TRRAPQ9Y4A5 3859 aa1.26□□□□□ -2.21
TMEM50B-208ENST00000474272 LRP1BQ9NZR2 4599 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 TPRXLQ17RH7 258 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 HIVEP1P15822 2718 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 DNAH11Q96DT5 4516 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 MTORP42345 2549 aa1.25□□□□□ -2.21
TMEM50B-208ENST00000474272 PLECQ15149 4684 aaKnown RBP1.24□□□□□ -2.21
TMEM50B-208ENST00000474272 SETD2Q9BYW2 2564 aaPredicted RBP1.24□□□□□ -2.21
TMEM50B-208ENST00000474272 ANK2Q01484 3957 aa1.24□□□□□ -2.21
TMEM50B-208ENST00000474272 ALMS1Q8TCU4 4167 aa1.24□□□□□ -2.21
TMEM50B-208ENST00000474272 NSD1Q96L73 2696 aaPredicted RBP1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 CMYA5Q8N3K9 4069 aa1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 COX6B2Q6YFQ2 88 aa1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 PRO2289Q9P1D8 64 aa1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 ATRQ13535 2644 aa1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 FASNP49327 2511 aaKnown RBP1.23□□□□□ -2.21
TMEM50B-208ENST00000474272 PKD1L1Q8TDX9 2849 aa1.22□□□□□ -2.21
TMEM50B-208ENST00000474272 SACSQ9NZJ4 4579 aa1.22□□□□□ -2.21
TMEM50B-208ENST00000474272 HELZ2Q9BYK8 2649 aaKnown RBP1.21□□□□□ -2.22
TMEM50B-208ENST00000474272 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
TMEM50B-208ENST00000474272 KRTAP21-3Q3LHN1 58 aa1.21□□□□□ -2.22
TMEM50B-208ENST00000474272 H1FX-AS1Q4G0G2 97 aa1.21□□□□□ -2.22
TMEM50B-208ENST00000474272 MAST4O15021 2626 aa1.21□□□□□ -2.22
TMEM50B-208ENST00000474272 LYSTQ99698 3801 aa1.2□□□□□ -2.22
TMEM50B-208ENST00000474272 TENM3Q9P273 2699 aa1.2□□□□□ -2.22
TMEM50B-208ENST00000474272 FLNBO75369 2602 aaKnown RBP1.2□□□□□ -2.22
TMEM50B-208ENST00000474272 SRRM2Q9UQ35 2752 aaKnown RBP1.2□□□□□ -2.22
TMEM50B-208ENST00000474272 PRKDCP78527 4128 aaKnown RBP1.19□□□□□ -2.22
TMEM50B-208ENST00000474272 INE1O15225 51 aa1.19□□□□□ -2.22
TMEM50B-208ENST00000474272 PLAC4Q8WY50 150 aa1.19□□□□□ -2.22
TMEM50B-208ENST00000474272 FAT2Q9NYQ8 4349 aa1.19□□□□□ -2.22
TMEM50B-208ENST00000474272 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
TMEM50B-208ENST00000474272 F8P00451 2351 aa1.18□□□□□ -2.22
TMEM50B-208ENST00000474272 H0YAA0 97 aa1.18□□□□□ -2.22
TMEM50B-208ENST00000474272 RPL37P61927 97 aaKnown RBP1.18□□□□□ -2.22
TMEM50B-208ENST00000474272 PKD1P98161 4303 aa1.18□□□□□ -2.22
TMEM50B-208ENST00000474272 CSMD3Q7Z407 3707 aa1.17□□□□□ -2.22
TMEM50B-208ENST00000474272 HECTD1Q9ULT8 2610 aa1.17□□□□□ -2.22
TMEM50B-208ENST00000474272 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
TMEM50B-208ENST00000474272 DNAH6Q9C0G6 4158 aa1.17□□□□□ -2.22
TMEM50B-208ENST00000474272 DNAH7Q8WXX0 4024 aa1.16□□□□□ -2.22
TMEM50B-208ENST00000474272 STAB1Q9NY15 2570 aa1.15□□□□□ -2.22
TMEM50B-208ENST00000474272 FAT3Q8TDW7 4589 aa1.15□□□□□ -2.23
TMEM50B-208ENST00000474272 M0QZ58 72 aa1.15□□□□□ -2.23
TMEM50B-208ENST00000474272 NBEAL1Q6ZS30 2694 aa1.15□□□□□ -2.23
TMEM50B-208ENST00000474272 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
TMEM50B-208ENST00000474272 COL6A5A8TX70 2615 aa1.15□□□□□ -2.23
TMEM50B-208ENST00000474272 HECTD4Q9Y4D8 3996 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 PKHD1L1Q86WI1 4243 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 FRAS1Q86XX4 4008 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 NOTCH1P46531 2555 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 KMT2AQ03164 3969 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 FAT1Q14517 4588 aa1.14□□□□□ -2.23
TMEM50B-208ENST00000474272 STAB2Q8WWQ8 2551 aa1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 DYNC1H1Q14204 4646 aaKnown RBP1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 MGAM2Q2M2H8 2515 aa1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 SMR3BP02814 79 aaPredicted RBP1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 S4R3F8 94 aa1.13□□□□□ -2.23
TMEM50B-208ENST00000474272 STARD9Q9P2P6 4700 aa1.12□□□□□ -2.23
TMEM50B-208ENST00000474272 HSPG2P98160 4391 aa1.12□□□□□ -2.23
TMEM50B-208ENST00000474272 LRP1Q07954 4544 aaKnown RBP1.12□□□□□ -2.23
TMEM50B-208ENST00000474272 VPS13BQ7Z7G8 4022 aa1.12□□□□□ -2.23
TMEM50B-208ENST00000474272 MEGF8Q7Z7M0 2845 aa1.11□□□□□ -2.23
TMEM50B-208ENST00000474272 TGP01266 2768 aa1.1□□□□□ -2.23
TMEM50B-208ENST00000474272 PKHD1P08F94 4074 aa1.09□□□□□ -2.24
TMEM50B-208ENST00000474272 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
TMEM50B-208ENST00000474272 TNXBP22105 4242 aa1.07□□□□□ -2.24
TMEM50B-208ENST00000474272 A0A0D9SG42 100 aa1.07□□□□□ -2.24
TMEM50B-208ENST00000474272 MT1HL1P0DM35 61 aa1.07□□□□□ -2.24
TMEM50B-208ENST00000474272 Q5VSD8 79 aa1.07□□□□□ -2.24
TMEM50B-208ENST00000474272 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms