RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-205ENST00000473883 KMT2AQ03164 3969 aa6.32□□□□□ -1.4
HCLS1-205ENST00000473883 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
HCLS1-205ENST00000473883 HERC2O95714 4834 aa6.29□□□□□ -1.4
HCLS1-205ENST00000473883 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
HCLS1-205ENST00000473883 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
HCLS1-205ENST00000473883 RYR1P21817 5038 aa6.24□□□□□ -1.41
HCLS1-205ENST00000473883 KIAA1109Q2LD37 5005 aa6.24□□□□□ -1.41
HCLS1-205ENST00000473883 HECTD4Q9Y4D8 3996 aa6.23□□□□□ -1.41
HCLS1-205ENST00000473883 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
HCLS1-205ENST00000473883 VPS13DQ5THJ4 4388 aa6.18□□□□□ -1.42
HCLS1-205ENST00000473883 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
HCLS1-205ENST00000473883 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
HCLS1-205ENST00000473883 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
HCLS1-205ENST00000473883 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
HCLS1-205ENST00000473883 DNAH2Q9P225 4427 aa6.12□□□□□ -1.43
HCLS1-205ENST00000473883 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
HCLS1-205ENST00000473883 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
HCLS1-205ENST00000473883 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
HCLS1-205ENST00000473883 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
HCLS1-205ENST00000473883 KRTAP1-5Q9BYS1 174 aa6.03□□□□□ -1.44
HCLS1-205ENST00000473883 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
HCLS1-205ENST00000473883 PKD1P98161 4303 aa6.02□□□□□ -1.45
HCLS1-205ENST00000473883 DNAH17Q9UFH2 4485 aa6.01□□□□□ -1.45
HCLS1-205ENST00000473883 A0A1B0GVY2 172 aa6□□□□□ -1.45
HCLS1-205ENST00000473883 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
HCLS1-205ENST00000473883 HSPG2P98160 4391 aa5.99□□□□□ -1.45
HCLS1-205ENST00000473883 M0QZ58 72 aa5.96□□□□□ -1.46
HCLS1-205ENST00000473883 HERC1Q15751 4861 aa5.94□□□□□ -1.46
HCLS1-205ENST00000473883 DNAH8Q96JB1 4490 aa5.93□□□□□ -1.46
HCLS1-205ENST00000473883 LRP1BQ9NZR2 4599 aa5.93□□□□□ -1.46
HCLS1-205ENST00000473883 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.47
HCLS1-205ENST00000473883 DNAH5Q8TE73 4624 aa5.87□□□□□ -1.47
HCLS1-205ENST00000473883 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
HCLS1-205ENST00000473883 MYCBP2O75592 4640 aa5.8□□□□□ -1.48
HCLS1-205ENST00000473883 FAT1Q14517 4588 aa5.79□□□□□ -1.48
HCLS1-205ENST00000473883 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
HCLS1-205ENST00000473883 Q5VSD8 79 aa5.74□□□□□ -1.49
HCLS1-205ENST00000473883 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
HCLS1-205ENST00000473883 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
HCLS1-205ENST00000473883 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.5
HCLS1-205ENST00000473883 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
HCLS1-205ENST00000473883 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
HCLS1-205ENST00000473883 HMCN2Q8NDA2 5059 aa5.59□□□□□ -1.51
HCLS1-205ENST00000473883 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
HCLS1-205ENST00000473883 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
HCLS1-205ENST00000473883 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
HCLS1-205ENST00000473883 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
HCLS1-205ENST00000473883 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
HCLS1-205ENST00000473883 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
HCLS1-205ENST00000473883 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
HCLS1-205ENST00000473883 LRP2P98164 4655 aa5.42□□□□□ -1.54
HCLS1-205ENST00000473883 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
HCLS1-205ENST00000473883 TNXBP22105 4242 aa5.33□□□□□ -1.56
HCLS1-205ENST00000473883 MT1HL1P0DM35 61 aa5.32□□□□□ -1.56
HCLS1-205ENST00000473883 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
HCLS1-205ENST00000473883 TNP1P09430 55 aa5.32□□□□□ -1.56
HCLS1-205ENST00000473883 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
HCLS1-205ENST00000473883 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
HCLS1-205ENST00000473883 LPAP08519 4548 aa5.22□□□□□ -1.57
HCLS1-205ENST00000473883 MUC2Q02817 5179 aa5.18□□□□□ -1.58
HCLS1-205ENST00000473883 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
HCLS1-205ENST00000473883 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
HCLS1-205ENST00000473883 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
HCLS1-205ENST00000473883 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
HCLS1-205ENST00000473883 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
HCLS1-205ENST00000473883 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
HCLS1-205ENST00000473883 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
HCLS1-205ENST00000473883 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
HCLS1-205ENST00000473883 MUC17Q685J3 4493 aa4.83□□□□□ -1.64
HCLS1-205ENST00000473883 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
HCLS1-205ENST00000473883 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
HCLS1-205ENST00000473883 LCE2BO14633 110 aa4.8□□□□□ -1.64
HCLS1-205ENST00000473883 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
HCLS1-205ENST00000473883 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
HCLS1-205ENST00000473883 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
HCLS1-205ENST00000473883 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
HCLS1-205ENST00000473883 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
HCLS1-205ENST00000473883 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
HCLS1-205ENST00000473883 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
HCLS1-205ENST00000473883 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
HCLS1-205ENST00000473883 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
HCLS1-205ENST00000473883 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
HCLS1-205ENST00000473883 MT1HP80294 61 aa4.56□□□□□ -1.68
HCLS1-205ENST00000473883 M0R2T5 61 aa4.48□□□□□ -1.69
HCLS1-205ENST00000473883 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
HCLS1-205ENST00000473883 USH2AO75445 5202 aa4.43□□□□□ -1.7
HCLS1-205ENST00000473883 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
HCLS1-205ENST00000473883 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
HCLS1-205ENST00000473883 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
HCLS1-205ENST00000473883 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
HCLS1-205ENST00000473883 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
HCLS1-205ENST00000473883 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
HCLS1-205ENST00000473883 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
HCLS1-205ENST00000473883 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
HCLS1-205ENST00000473883 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
HCLS1-205ENST00000473883 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
HCLS1-205ENST00000473883 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
HCLS1-205ENST00000473883 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
HCLS1-205ENST00000473883 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
HCLS1-205ENST00000473883 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms