RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
AGAP3-212ENST00000473633 ALMS1Q8TCU4 4167 aa5.2□□□□□ -1.58
AGAP3-212ENST00000473633 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
AGAP3-212ENST00000473633 KIAA1109Q2LD37 5005 aa5.18□□□□□ -1.58
AGAP3-212ENST00000473633 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
AGAP3-212ENST00000473633 RYR2Q92736 4967 aa5.15□□□□□ -1.58
AGAP3-212ENST00000473633 PKD1P98161 4303 aa5.14□□□□□ -1.59
AGAP3-212ENST00000473633 RYR3Q15413 4870 aa5.12□□□□□ -1.59
AGAP3-212ENST00000473633 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
AGAP3-212ENST00000473633 LRP1Q07954 4544 aaKnown RBP5.1□□□□□ -1.59
AGAP3-212ENST00000473633 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
AGAP3-212ENST00000473633 S4R3F8 94 aa5.07□□□□□ -1.6
AGAP3-212ENST00000473633 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
AGAP3-212ENST00000473633 KRTAP10-4P60372 401 aaPredicted RBP5.04□□□□□ -1.6
AGAP3-212ENST00000473633 RYR1P21817 5038 aa5.03□□□□□ -1.6
AGAP3-212ENST00000473633 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
AGAP3-212ENST00000473633 EPPK1P58107 5090 aaKnown RBP5.02□□□□□ -1.61
AGAP3-212ENST00000473633 FAT3Q8TDW7 4589 aa5.01□□□□□ -1.61
AGAP3-212ENST00000473633 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
AGAP3-212ENST00000473633 TPRXLQ17RH7 258 aa4.98□□□□□ -1.61
AGAP3-212ENST00000473633 R4GN34 69 aa4.96□□□□□ -1.62
AGAP3-212ENST00000473633 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
AGAP3-212ENST00000473633 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
AGAP3-212ENST00000473633 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
AGAP3-212ENST00000473633 M0QZ58 72 aa4.92□□□□□ -1.62
AGAP3-212ENST00000473633 HSPG2P98160 4391 aa4.92□□□□□ -1.62
AGAP3-212ENST00000473633 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
AGAP3-212ENST00000473633 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
AGAP3-212ENST00000473633 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
AGAP3-212ENST00000473633 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
AGAP3-212ENST00000473633 XP32Q5T750 250 aa4.84□□□□□ -1.63
AGAP3-212ENST00000473633 PLAC4Q8WY50 150 aa4.83□□□□□ -1.64
AGAP3-212ENST00000473633 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
AGAP3-212ENST00000473633 HERC2O95714 4834 aa4.79□□□□□ -1.64
AGAP3-212ENST00000473633 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
AGAP3-212ENST00000473633 LRP2P98164 4655 aa4.77□□□□□ -1.65
AGAP3-212ENST00000473633 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
AGAP3-212ENST00000473633 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
AGAP3-212ENST00000473633 LPAP08519 4548 aa4.74□□□□□ -1.65
AGAP3-212ENST00000473633 M0R2T5 61 aa4.73□□□□□ -1.65
AGAP3-212ENST00000473633 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
AGAP3-212ENST00000473633 TNXBP22105 4242 aa4.7□□□□□ -1.66
AGAP3-212ENST00000473633 KRTAP3-2Q9BYR7 98 aa4.65□□□□□ -1.66
AGAP3-212ENST00000473633 KRTAP3-3Q9BYR6 98 aa4.65□□□□□ -1.67
AGAP3-212ENST00000473633 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
AGAP3-212ENST00000473633 MUC2Q02817 5179 aa4.63□□□□□ -1.67
AGAP3-212ENST00000473633 HERC1Q15751 4861 aa4.63□□□□□ -1.67
AGAP3-212ENST00000473633 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
AGAP3-212ENST00000473633 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
AGAP3-212ENST00000473633 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
AGAP3-212ENST00000473633 KRTAP4-1Q9BYQ7 146 aa4.51□□□□□ -1.69
AGAP3-212ENST00000473633 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
AGAP3-212ENST00000473633 TNP1P09430 55 aa4.47□□□□□ -1.69
AGAP3-212ENST00000473633 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
AGAP3-212ENST00000473633 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
AGAP3-212ENST00000473633 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
AGAP3-212ENST00000473633 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
AGAP3-212ENST00000473633 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
AGAP3-212ENST00000473633 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
AGAP3-212ENST00000473633 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
AGAP3-212ENST00000473633 INE1O15225 51 aa4.22□□□□□ -1.73
AGAP3-212ENST00000473633 KRTAP19-2Q3LHN2 52 aa4.15□□□□□ -1.74
AGAP3-212ENST00000473633 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
AGAP3-212ENST00000473633 MT1HP80294 61 aa4.11□□□□□ -1.75
AGAP3-212ENST00000473633 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
AGAP3-212ENST00000473633 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
AGAP3-212ENST00000473633 MT1FP04733 61 aa4□□□□□ -1.77
AGAP3-212ENST00000473633 MT2AP02795 61 aa3.99□□□□□ -1.77
AGAP3-212ENST00000473633 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
AGAP3-212ENST00000473633 USH2AO75445 5202 aa3.95□□□□□ -1.78
AGAP3-212ENST00000473633 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
AGAP3-212ENST00000473633 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
AGAP3-212ENST00000473633 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
AGAP3-212ENST00000473633 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
AGAP3-212ENST00000473633 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
AGAP3-212ENST00000473633 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
AGAP3-212ENST00000473633 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
AGAP3-212ENST00000473633 MT1BP07438 61 aa3.74□□□□□ -1.81
AGAP3-212ENST00000473633 LCE2BO14633 110 aa3.72□□□□□ -1.81
AGAP3-212ENST00000473633 LCE2AQ5TA79 106 aaPredicted RBP3.72□□□□□ -1.81
AGAP3-212ENST00000473633 KMT2DO14686 5537 aa3.71□□□□□ -1.82
AGAP3-212ENST00000473633 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
AGAP3-212ENST00000473633 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
AGAP3-212ENST00000473633 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
AGAP3-212ENST00000473633 MT1XP80297 61 aa3.66□□□□□ -1.82
AGAP3-212ENST00000473633 KRTAP10-5P60370 271 aa3.65□□□□□ -1.82
AGAP3-212ENST00000473633 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
AGAP3-212ENST00000473633 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
AGAP3-212ENST00000473633 KRTAP4-8Q9BYQ9 185 aa3.58□□□□□ -1.84
AGAP3-212ENST00000473633 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
AGAP3-212ENST00000473633 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
AGAP3-212ENST00000473633 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
AGAP3-212ENST00000473633 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
AGAP3-212ENST00000473633 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
AGAP3-212ENST00000473633 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
AGAP3-212ENST00000473633 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
AGAP3-212ENST00000473633 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
AGAP3-212ENST00000473633 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
AGAP3-212ENST00000473633 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
AGAP3-212ENST00000473633 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms