RNA–Protein interactions for RNA: ENST00000473039.5

DENND1A-206, Transcript of DENN domain containing 1A, humanhuman

TSL 1 (best)

Gene DENND1A, Length 4,800 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-206ENST00000473039 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
DENND1A-206ENST00000473039 KRTAP10-10P60014 251 aa5.53□□□□□ -1.52
DENND1A-206ENST00000473039 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
DENND1A-206ENST00000473039 PRKDCP78527 4128 aaKnown RBP5.51□□□□□ -1.53
DENND1A-206ENST00000473039 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
DENND1A-206ENST00000473039 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
DENND1A-206ENST00000473039 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
DENND1A-206ENST00000473039 KMT2AQ03164 3969 aa5.46□□□□□ -1.54
DENND1A-206ENST00000473039 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
DENND1A-206ENST00000473039 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
DENND1A-206ENST00000473039 HECTD4Q9Y4D8 3996 aa5.43□□□□□ -1.54
DENND1A-206ENST00000473039 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
DENND1A-206ENST00000473039 FRAS1Q86XX4 4008 aa5.4□□□□□ -1.54
DENND1A-206ENST00000473039 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
DENND1A-206ENST00000473039 KRTAP10-4P60372 401 aaPredicted RBP5.38□□□□□ -1.55
DENND1A-206ENST00000473039 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.55
DENND1A-206ENST00000473039 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
DENND1A-206ENST00000473039 DNAH6Q9C0G6 4158 aa5.32□□□□□ -1.56
DENND1A-206ENST00000473039 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
DENND1A-206ENST00000473039 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
DENND1A-206ENST00000473039 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
DENND1A-206ENST00000473039 DNAH5Q8TE73 4624 aa5.25□□□□□ -1.57
DENND1A-206ENST00000473039 PKD1P98161 4303 aa5.24□□□□□ -1.57
DENND1A-206ENST00000473039 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
DENND1A-206ENST00000473039 LRP1BQ9NZR2 4599 aa5.11□□□□□ -1.59
DENND1A-206ENST00000473039 PKHD1P08F94 4074 aa5.11□□□□□ -1.59
DENND1A-206ENST00000473039 SACSQ9NZJ4 4579 aa5.09□□□□□ -1.59
DENND1A-206ENST00000473039 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.6
DENND1A-206ENST00000473039 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
DENND1A-206ENST00000473039 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
DENND1A-206ENST00000473039 RYR1P21817 5038 aa5.03□□□□□ -1.6
DENND1A-206ENST00000473039 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
DENND1A-206ENST00000473039 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
DENND1A-206ENST00000473039 INE1O15225 51 aa5.01□□□□□ -1.61
DENND1A-206ENST00000473039 FAT1Q14517 4588 aa4.99□□□□□ -1.61
DENND1A-206ENST00000473039 RYR3Q15413 4870 aa4.95□□□□□ -1.62
DENND1A-206ENST00000473039 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
DENND1A-206ENST00000473039 APOBP04114 4563 aaKnown RBP4.91□□□□□ -1.62
DENND1A-206ENST00000473039 RYR2Q92736 4967 aa4.91□□□□□ -1.62
DENND1A-206ENST00000473039 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
DENND1A-206ENST00000473039 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
DENND1A-206ENST00000473039 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
DENND1A-206ENST00000473039 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
DENND1A-206ENST00000473039 BIRC6Q9NR09 4857 aa4.84□□□□□ -1.63
DENND1A-206ENST00000473039 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
DENND1A-206ENST00000473039 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
DENND1A-206ENST00000473039 TNXBP22105 4242 aa4.76□□□□□ -1.65
DENND1A-206ENST00000473039 HERC2O95714 4834 aa4.75□□□□□ -1.65
DENND1A-206ENST00000473039 HSPG2P98160 4391 aa4.75□□□□□ -1.65
DENND1A-206ENST00000473039 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
DENND1A-206ENST00000473039 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
DENND1A-206ENST00000473039 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
DENND1A-206ENST00000473039 MT1HP80294 61 aa4.69□□□□□ -1.66
DENND1A-206ENST00000473039 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
DENND1A-206ENST00000473039 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
DENND1A-206ENST00000473039 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
DENND1A-206ENST00000473039 LPAP08519 4548 aa4.56□□□□□ -1.68
DENND1A-206ENST00000473039 MT2AP02795 61 aa4.54□□□□□ -1.68
DENND1A-206ENST00000473039 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
DENND1A-206ENST00000473039 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
DENND1A-206ENST00000473039 PCLOQ9Y6V0 5065 aa4.49□□□□□ -1.69
DENND1A-206ENST00000473039 MT1FP04733 61 aa4.46□□□□□ -1.69
DENND1A-206ENST00000473039 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
DENND1A-206ENST00000473039 HERC1Q15751 4861 aa4.44□□□□□ -1.7
DENND1A-206ENST00000473039 LRP2P98164 4655 aa4.44□□□□□ -1.7
DENND1A-206ENST00000473039 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.7
DENND1A-206ENST00000473039 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
DENND1A-206ENST00000473039 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
DENND1A-206ENST00000473039 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
DENND1A-206ENST00000473039 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
DENND1A-206ENST00000473039 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
DENND1A-206ENST00000473039 LCE2CQ5TA81 110 aa4.28□□□□□ -1.72
DENND1A-206ENST00000473039 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
DENND1A-206ENST00000473039 MT1XP80297 61 aa4.22□□□□□ -1.73
DENND1A-206ENST00000473039 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
DENND1A-206ENST00000473039 MUC2Q02817 5179 aa4.2□□□□□ -1.74
DENND1A-206ENST00000473039 MT1BP07438 61 aa4.17□□□□□ -1.74
DENND1A-206ENST00000473039 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
DENND1A-206ENST00000473039 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
DENND1A-206ENST00000473039 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
DENND1A-206ENST00000473039 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
DENND1A-206ENST00000473039 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
DENND1A-206ENST00000473039 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
DENND1A-206ENST00000473039 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
DENND1A-206ENST00000473039 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
DENND1A-206ENST00000473039 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
DENND1A-206ENST00000473039 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.76
DENND1A-206ENST00000473039 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
DENND1A-206ENST00000473039 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
DENND1A-206ENST00000473039 LCE2BO14633 110 aa4□□□□□ -1.77
DENND1A-206ENST00000473039 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
DENND1A-206ENST00000473039 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
DENND1A-206ENST00000473039 SPRR2EP22531 72 aa3.95□□□□□ -1.78
DENND1A-206ENST00000473039 SPRR2BP35325 72 aa3.95□□□□□ -1.78
DENND1A-206ENST00000473039 SPRR2AP35326 72 aa3.95□□□□□ -1.78
DENND1A-206ENST00000473039 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
DENND1A-206ENST00000473039 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
DENND1A-206ENST00000473039 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
DENND1A-206ENST00000473039 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
DENND1A-206ENST00000473039 MT1GP13640 62 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms