RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 RYR3Q15413 4870 aa3.01□□□□□ -1.93
TRA2B-207ENST00000463328 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
TRA2B-207ENST00000463328 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 DNAH11Q96DT5 4516 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 HRES1P13985 223 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 Q6ZSA8 131 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 PSORS1C2Q9UIG4 136 aa2.99□□□□□ -1.93
TRA2B-207ENST00000463328 KRTAP29-1A8MX34 341 aaPredicted RBP2.98□□□□□ -1.93
TRA2B-207ENST00000463328 K7EQZ3 153 aa2.98□□□□□ -1.93
TRA2B-207ENST00000463328 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
TRA2B-207ENST00000463328 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
TRA2B-207ENST00000463328 DNAH5Q8TE73 4624 aa2.97□□□□□ -1.93
TRA2B-207ENST00000463328 PKD1P98161 4303 aa2.96□□□□□ -1.94
TRA2B-207ENST00000463328 SSBP3-AS1Q7Z2R9 100 aa2.96□□□□□ -1.94
TRA2B-207ENST00000463328 COA5Q86WW8 74 aa2.96□□□□□ -1.94
TRA2B-207ENST00000463328 KRTAP10-2P60368 255 aa2.95□□□□□ -1.94
TRA2B-207ENST00000463328 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
TRA2B-207ENST00000463328 IGKV2-30P06310 120 aa2.94□□□□□ -1.94
TRA2B-207ENST00000463328 KRTAP10-1P60331 282 aa2.94□□□□□ -1.94
TRA2B-207ENST00000463328 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
TRA2B-207ENST00000463328 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
TRA2B-207ENST00000463328 MMP24-AS1A0A0U1RRL7 71 aa2.93□□□□□ -1.94
TRA2B-207ENST00000463328 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
TRA2B-207ENST00000463328 SPINK6Q6UWN8 80 aa2.91□□□□□ -1.94
TRA2B-207ENST00000463328 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
TRA2B-207ENST00000463328 RYR2Q92736 4967 aa2.9□□□□□ -1.95
TRA2B-207ENST00000463328 WFDC13Q8IUB5 93 aa2.9□□□□□ -1.95
TRA2B-207ENST00000463328 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
TRA2B-207ENST00000463328 LRP1BQ9NZR2 4599 aa2.89□□□□□ -1.95
TRA2B-207ENST00000463328 A0A1B0GU69 56 aa2.89□□□□□ -1.95
TRA2B-207ENST00000463328 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
TRA2B-207ENST00000463328 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
TRA2B-207ENST00000463328 ANAPC11Q9NYG5 84 aa2.87□□□□□ -1.95
TRA2B-207ENST00000463328 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
TRA2B-207ENST00000463328 RPS29P62273 56 aaKnown RBP2.87□□□□□ -1.95
TRA2B-207ENST00000463328 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
TRA2B-207ENST00000463328 SPINK1P00995 79 aa2.86□□□□□ -1.95
TRA2B-207ENST00000463328 VPS13BQ7Z7G8 4022 aa2.85□□□□□ -1.95
TRA2B-207ENST00000463328 FAT1Q14517 4588 aa2.85□□□□□ -1.95
TRA2B-207ENST00000463328 ACYP2P14621 99 aa2.85□□□□□ -1.95
TRA2B-207ENST00000463328 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
TRA2B-207ENST00000463328 IGKV2D-30A0A075B6S6 120 aa2.84□□□□□ -1.95
TRA2B-207ENST00000463328 DYNC1H1Q14204 4646 aaKnown RBP2.84□□□□□ -1.96
TRA2B-207ENST00000463328 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
TRA2B-207ENST00000463328 KRTAP9-3Q9BYQ3 159 aa2.82□□□□□ -1.96
TRA2B-207ENST00000463328 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
TRA2B-207ENST00000463328 MYCBP2O75592 4640 aa2.8□□□□□ -1.96
TRA2B-207ENST00000463328 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
TRA2B-207ENST00000463328 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
TRA2B-207ENST00000463328 PCOTHQ58A44 107 aa2.78□□□□□ -1.96
TRA2B-207ENST00000463328 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
TRA2B-207ENST00000463328 RYR1P21817 5038 aa2.77□□□□□ -1.97
TRA2B-207ENST00000463328 LRP1Q07954 4544 aaKnown RBP2.76□□□□□ -1.97
TRA2B-207ENST00000463328 HSPG2P98160 4391 aa2.75□□□□□ -1.97
TRA2B-207ENST00000463328 INE1O15225 51 aa2.75□□□□□ -1.97
TRA2B-207ENST00000463328 Q5VSD8 79 aa2.75□□□□□ -1.97
TRA2B-207ENST00000463328 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
TRA2B-207ENST00000463328 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
TRA2B-207ENST00000463328 MUC2Q02817 5179 aa2.73□□□□□ -1.97
TRA2B-207ENST00000463328 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
TRA2B-207ENST00000463328 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
TRA2B-207ENST00000463328 HERC1Q15751 4861 aa2.7□□□□□ -1.98
TRA2B-207ENST00000463328 TNXBP22105 4242 aa2.7□□□□□ -1.98
TRA2B-207ENST00000463328 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
TRA2B-207ENST00000463328 HERC2O95714 4834 aa2.65□□□□□ -1.98
TRA2B-207ENST00000463328 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
TRA2B-207ENST00000463328 MT1HL1P0DM35 61 aa2.64□□□□□ -1.99
TRA2B-207ENST00000463328 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
TRA2B-207ENST00000463328 RPL37P61927 97 aaKnown RBP2.62□□□□□ -1.99
TRA2B-207ENST00000463328 COX6B2Q6YFQ2 88 aa2.61□□□□□ -1.99
TRA2B-207ENST00000463328 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
TRA2B-207ENST00000463328 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
TRA2B-207ENST00000463328 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
TRA2B-207ENST00000463328 LPAP08519 4548 aa2.59□□□□□ -1.99
TRA2B-207ENST00000463328 KRTAP12-2P59991 146 aa2.58□□□□□ -2
TRA2B-207ENST00000463328 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
TRA2B-207ENST00000463328 SSPOA2VEC9 5147 aa2.56□□□□□ -2
TRA2B-207ENST00000463328 LRP2P98164 4655 aa2.56□□□□□ -2
TRA2B-207ENST00000463328 H0YAA0 97 aa2.56□□□□□ -2
TRA2B-207ENST00000463328 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
TRA2B-207ENST00000463328 PP632Q6XCG6 107 aa2.53□□□□□ -2
TRA2B-207ENST00000463328 H1FX-AS1Q4G0G2 97 aa2.5□□□□□ -2.01
TRA2B-207ENST00000463328 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
TRA2B-207ENST00000463328 S4R3F8 94 aa2.48□□□□□ -2.01
TRA2B-207ENST00000463328 KRTAP10-6P60371 365 aaPredicted RBP2.48□□□□□ -2.01
TRA2B-207ENST00000463328 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.01
TRA2B-207ENST00000463328 NEBP20929 6669 aa2.46□□□□□ -2.02
TRA2B-207ENST00000463328 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
TRA2B-207ENST00000463328 HMCN2Q8NDA2 5059 aa2.45□□□□□ -2.02
TRA2B-207ENST00000463328 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
TRA2B-207ENST00000463328 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TRA2B-207ENST00000463328 M0QZ58 72 aa2.4□□□□□ -2.02
TRA2B-207ENST00000463328 A0A0D9SG42 100 aa2.39□□□□□ -2.03
TRA2B-207ENST00000463328 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
TRA2B-207ENST00000463328 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
TRA2B-207ENST00000463328 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
TRA2B-207ENST00000463328 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
TRA2B-207ENST00000463328 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.04
TRA2B-207ENST00000463328 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms