RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 A0A0D9SG42 100 aa7.12□□□□□ -1.27
PTPRE-204ENST00000455661 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
PTPRE-204ENST00000455661 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
PTPRE-204ENST00000455661 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
PTPRE-204ENST00000455661 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
PTPRE-204ENST00000455661 S4R3F8 94 aa7.02□□□□□ -1.28
PTPRE-204ENST00000455661 KRTAP10-4P60372 401 aaPredicted RBP7□□□□□ -1.29
PTPRE-204ENST00000455661 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
PTPRE-204ENST00000455661 PKHD1P08F94 4074 aa6.98□□□□□ -1.29
PTPRE-204ENST00000455661 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
PTPRE-204ENST00000455661 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
PTPRE-204ENST00000455661 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
PTPRE-204ENST00000455661 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
PTPRE-204ENST00000455661 DYNC1H1Q14204 4646 aaKnown RBP6.91□□□□□ -1.3
PTPRE-204ENST00000455661 KRTAP12-2P59991 146 aa6.9□□□□□ -1.3
PTPRE-204ENST00000455661 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
PTPRE-204ENST00000455661 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
PTPRE-204ENST00000455661 FAT1Q14517 4588 aa6.88□□□□□ -1.31
PTPRE-204ENST00000455661 NDUFAF8A1L188 74 aa6.88□□□□□ -1.31
PTPRE-204ENST00000455661 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
PTPRE-204ENST00000455661 XP32Q5T750 250 aa6.84□□□□□ -1.31
PTPRE-204ENST00000455661 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
PTPRE-204ENST00000455661 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
PTPRE-204ENST00000455661 M0QZ58 72 aa6.78□□□□□ -1.32
PTPRE-204ENST00000455661 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
PTPRE-204ENST00000455661 HSPG2P98160 4391 aa6.73□□□□□ -1.33
PTPRE-204ENST00000455661 TNXBP22105 4242 aa6.72□□□□□ -1.33
PTPRE-204ENST00000455661 Q5VSD8 79 aa6.62□□□□□ -1.35
PTPRE-204ENST00000455661 R4GN34 69 aa6.55□□□□□ -1.36
PTPRE-204ENST00000455661 MYCBP2O75592 4640 aa6.55□□□□□ -1.36
PTPRE-204ENST00000455661 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
PTPRE-204ENST00000455661 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
PTPRE-204ENST00000455661 RYR2Q92736 4967 aa6.48□□□□□ -1.37
PTPRE-204ENST00000455661 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
PTPRE-204ENST00000455661 LPAP08519 4548 aa6.44□□□□□ -1.38
PTPRE-204ENST00000455661 KMT2CQ8NEZ4 4911 aaKnown RBP6.41□□□□□ -1.38
PTPRE-204ENST00000455661 KRTAP21-3Q3LHN1 58 aa6.41□□□□□ -1.38
PTPRE-204ENST00000455661 LRP2P98164 4655 aa6.35□□□□□ -1.39
PTPRE-204ENST00000455661 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
PTPRE-204ENST00000455661 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
PTPRE-204ENST00000455661 LUZP6Q538Z0 58 aa6.34□□□□□ -1.39
PTPRE-204ENST00000455661 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
PTPRE-204ENST00000455661 RYR1P21817 5038 aa6.31□□□□□ -1.4
PTPRE-204ENST00000455661 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
PTPRE-204ENST00000455661 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
PTPRE-204ENST00000455661 RYR3Q15413 4870 aa6.11□□□□□ -1.43
PTPRE-204ENST00000455661 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
PTPRE-204ENST00000455661 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
PTPRE-204ENST00000455661 TNP1P09430 55 aa6.07□□□□□ -1.44
PTPRE-204ENST00000455661 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
PTPRE-204ENST00000455661 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
PTPRE-204ENST00000455661 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
PTPRE-204ENST00000455661 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
PTPRE-204ENST00000455661 EPPK1P58107 5090 aaKnown RBP5.8□□□□□ -1.48
PTPRE-204ENST00000455661 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
PTPRE-204ENST00000455661 HERC1Q15751 4861 aa5.77□□□□□ -1.49
PTPRE-204ENST00000455661 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
PTPRE-204ENST00000455661 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
PTPRE-204ENST00000455661 MUC2Q02817 5179 aa5.64□□□□□ -1.51
PTPRE-204ENST00000455661 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
PTPRE-204ENST00000455661 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
PTPRE-204ENST00000455661 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
PTPRE-204ENST00000455661 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
PTPRE-204ENST00000455661 INE1O15225 51 aa5.57□□□□□ -1.52
PTPRE-204ENST00000455661 HERC2O95714 4834 aa5.56□□□□□ -1.52
PTPRE-204ENST00000455661 M0R2T5 61 aa5.52□□□□□ -1.53
PTPRE-204ENST00000455661 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
PTPRE-204ENST00000455661 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
PTPRE-204ENST00000455661 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
PTPRE-204ENST00000455661 MT1FP04733 61 aa5.39□□□□□ -1.55
PTPRE-204ENST00000455661 MT1HP80294 61 aa5.38□□□□□ -1.55
PTPRE-204ENST00000455661 MT2AP02795 61 aa5.37□□□□□ -1.55
PTPRE-204ENST00000455661 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
PTPRE-204ENST00000455661 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
PTPRE-204ENST00000455661 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
PTPRE-204ENST00000455661 KRTAP10-5P60370 271 aa5.34□□□□□ -1.56
PTPRE-204ENST00000455661 MT1XP80297 61 aa5.31□□□□□ -1.56
PTPRE-204ENST00000455661 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
PTPRE-204ENST00000455661 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
PTPRE-204ENST00000455661 MT1BP07438 61 aa5.28□□□□□ -1.56
PTPRE-204ENST00000455661 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
PTPRE-204ENST00000455661 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
PTPRE-204ENST00000455661 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
PTPRE-204ENST00000455661 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
PTPRE-204ENST00000455661 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
PTPRE-204ENST00000455661 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
PTPRE-204ENST00000455661 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
PTPRE-204ENST00000455661 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
PTPRE-204ENST00000455661 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
PTPRE-204ENST00000455661 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
PTPRE-204ENST00000455661 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
PTPRE-204ENST00000455661 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
PTPRE-204ENST00000455661 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
PTPRE-204ENST00000455661 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
PTPRE-204ENST00000455661 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
PTPRE-204ENST00000455661 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
PTPRE-204ENST00000455661 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
PTPRE-204ENST00000455661 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
PTPRE-204ENST00000455661 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
PTPRE-204ENST00000455661 KMT2DO14686 5537 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms