RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
BRCC3-208ENST00000453705 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
BRCC3-208ENST00000453705 KIAA1109Q2LD37 5005 aa4.31□□□□□ -1.72
BRCC3-208ENST00000453705 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
BRCC3-208ENST00000453705 DYNC1H1Q14204 4646 aaKnown RBP4.3□□□□□ -1.72
BRCC3-208ENST00000453705 RPS29P62273 56 aaKnown RBP4.29□□□□□ -1.72
BRCC3-208ENST00000453705 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.73
BRCC3-208ENST00000453705 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.73
BRCC3-208ENST00000453705 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
BRCC3-208ENST00000453705 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
BRCC3-208ENST00000453705 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
BRCC3-208ENST00000453705 XP32Q5T750 250 aa4.26□□□□□ -1.73
BRCC3-208ENST00000453705 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
BRCC3-208ENST00000453705 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
BRCC3-208ENST00000453705 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
BRCC3-208ENST00000453705 LRP1BQ9NZR2 4599 aa4.24□□□□□ -1.73
BRCC3-208ENST00000453705 APOBP04114 4563 aaKnown RBP4.23□□□□□ -1.73
BRCC3-208ENST00000453705 PKHD1P08F94 4074 aa4.23□□□□□ -1.73
BRCC3-208ENST00000453705 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
BRCC3-208ENST00000453705 A0A1B0GU69 56 aa4.21□□□□□ -1.74
BRCC3-208ENST00000453705 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.74
BRCC3-208ENST00000453705 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
BRCC3-208ENST00000453705 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
BRCC3-208ENST00000453705 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
BRCC3-208ENST00000453705 SPINK1P00995 79 aa4.19□□□□□ -1.74
BRCC3-208ENST00000453705 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
BRCC3-208ENST00000453705 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
BRCC3-208ENST00000453705 ACYP2P14621 99 aa4.17□□□□□ -1.74
BRCC3-208ENST00000453705 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
BRCC3-208ENST00000453705 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
BRCC3-208ENST00000453705 HERC1Q15751 4861 aa4.15□□□□□ -1.74
BRCC3-208ENST00000453705 LCE4AQ5TA78 99 aa4.15□□□□□ -1.74
BRCC3-208ENST00000453705 Q5VSD8 79 aa4.15□□□□□ -1.75
BRCC3-208ENST00000453705 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
BRCC3-208ENST00000453705 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
BRCC3-208ENST00000453705 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.76
BRCC3-208ENST00000453705 TNXBP22105 4242 aa4.08□□□□□ -1.76
BRCC3-208ENST00000453705 HSPG2P98160 4391 aa4.08□□□□□ -1.76
BRCC3-208ENST00000453705 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
BRCC3-208ENST00000453705 FAT1Q14517 4588 aa4.06□□□□□ -1.76
BRCC3-208ENST00000453705 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
BRCC3-208ENST00000453705 MYCBP2O75592 4640 aa4.03□□□□□ -1.76
BRCC3-208ENST00000453705 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
BRCC3-208ENST00000453705 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
BRCC3-208ENST00000453705 FAT3Q8TDW7 4589 aa4.01□□□□□ -1.77
BRCC3-208ENST00000453705 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
BRCC3-208ENST00000453705 MT1HL1P0DM35 61 aa3.96□□□□□ -1.78
BRCC3-208ENST00000453705 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
BRCC3-208ENST00000453705 H0YAA0 97 aa3.91□□□□□ -1.78
BRCC3-208ENST00000453705 INE1O15225 51 aa3.91□□□□□ -1.78
BRCC3-208ENST00000453705 RNF213Q63HN8 5207 aa3.91□□□□□ -1.78
BRCC3-208ENST00000453705 RPL37P61927 97 aaKnown RBP3.89□□□□□ -1.79
BRCC3-208ENST00000453705 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
BRCC3-208ENST00000453705 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
BRCC3-208ENST00000453705 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
BRCC3-208ENST00000453705 KRTAP4-8Q9BYQ9 185 aa3.87□□□□□ -1.79
BRCC3-208ENST00000453705 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
BRCC3-208ENST00000453705 MUC2Q02817 5179 aa3.83□□□□□ -1.8
BRCC3-208ENST00000453705 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
BRCC3-208ENST00000453705 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
BRCC3-208ENST00000453705 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
BRCC3-208ENST00000453705 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
BRCC3-208ENST00000453705 COX6B2Q6YFQ2 88 aa3.81□□□□□ -1.8
BRCC3-208ENST00000453705 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
BRCC3-208ENST00000453705 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
BRCC3-208ENST00000453705 LRP2P98164 4655 aa3.77□□□□□ -1.81
BRCC3-208ENST00000453705 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
BRCC3-208ENST00000453705 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
BRCC3-208ENST00000453705 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
BRCC3-208ENST00000453705 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
BRCC3-208ENST00000453705 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
BRCC3-208ENST00000453705 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
BRCC3-208ENST00000453705 KRTAP12-2P59991 146 aa3.65□□□□□ -1.82
BRCC3-208ENST00000453705 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
BRCC3-208ENST00000453705 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
BRCC3-208ENST00000453705 S4R3F8 94 aa3.63□□□□□ -1.83
BRCC3-208ENST00000453705 LPAP08519 4548 aa3.6□□□□□ -1.83
BRCC3-208ENST00000453705 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
BRCC3-208ENST00000453705 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
BRCC3-208ENST00000453705 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
BRCC3-208ENST00000453705 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
BRCC3-208ENST00000453705 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
BRCC3-208ENST00000453705 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
BRCC3-208ENST00000453705 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
BRCC3-208ENST00000453705 M0QZ58 72 aa3.48□□□□□ -1.85
BRCC3-208ENST00000453705 A0A0D9SG42 100 aa3.47□□□□□ -1.85
BRCC3-208ENST00000453705 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
BRCC3-208ENST00000453705 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
BRCC3-208ENST00000453705 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
BRCC3-208ENST00000453705 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
BRCC3-208ENST00000453705 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
BRCC3-208ENST00000453705 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
BRCC3-208ENST00000453705 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
BRCC3-208ENST00000453705 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
BRCC3-208ENST00000453705 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
BRCC3-208ENST00000453705 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
BRCC3-208ENST00000453705 MT1HP80294 61 aa3.34□□□□□ -1.88
BRCC3-208ENST00000453705 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.88
BRCC3-208ENST00000453705 M0R2T5 61 aa3.32□□□□□ -1.88
BRCC3-208ENST00000453705 NEBP20929 6669 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms