RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.23
BRCC3-208ENST00000453705 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
BRCC3-208ENST00000453705 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
BRCC3-208ENST00000453705 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
BRCC3-208ENST00000453705 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
BRCC3-208ENST00000453705 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
BRCC3-208ENST00000453705 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
BRCC3-208ENST00000453705 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
BRCC3-208ENST00000453705 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
BRCC3-208ENST00000453705 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
BRCC3-208ENST00000453705 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
BRCC3-208ENST00000453705 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
BRCC3-208ENST00000453705 KCNA4P22459 653 aa14.17□□□□□ -0.14
BRCC3-208ENST00000453705 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
BRCC3-208ENST00000453705 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.16
BRCC3-208ENST00000453705 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.17
BRCC3-208ENST00000453705 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
BRCC3-208ENST00000453705 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
BRCC3-208ENST00000453705 APLP2Q06481 763 aa13.86□□□□□ -0.19
BRCC3-208ENST00000453705 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
BRCC3-208ENST00000453705 ARXQ96QS3 562 aa13.63□□□□□ -0.23
BRCC3-208ENST00000453705 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-208ENST00000453705 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
BRCC3-208ENST00000453705 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
BRCC3-208ENST00000453705 ERICH6Q7L0X2 663 aa13.57□□□□□ -0.24
BRCC3-208ENST00000453705 MYT1Q01538 1121 aa13.54□□□□□ -0.24
BRCC3-208ENST00000453705 TAOK2Q9UL54 1235 aa13.52□□□□□ -0.24
BRCC3-208ENST00000453705 NACADO15069 1562 aa13.42□□□□□ -0.26
BRCC3-208ENST00000453705 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
BRCC3-208ENST00000453705 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
BRCC3-208ENST00000453705 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
BRCC3-208ENST00000453705 ABCC9O60706 1549 aa13.36□□□□□ -0.27
BRCC3-208ENST00000453705 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-208ENST00000453705 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
BRCC3-208ENST00000453705 ADRA2BP18089 450 aa13.23□□□□□ -0.29
BRCC3-208ENST00000453705 PODXL2Q9NZ53 605 aa13.22□□□□□ -0.29
BRCC3-208ENST00000453705 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
BRCC3-208ENST00000453705 BCANQ96GW7 911 aa13.19□□□□□ -0.3
BRCC3-208ENST00000453705 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
BRCC3-208ENST00000453705 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
BRCC3-208ENST00000453705 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
BRCC3-208ENST00000453705 PLCB2Q00722 1185 aa13.05□□□□□ -0.32
BRCC3-208ENST00000453705 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
BRCC3-208ENST00000453705 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
BRCC3-208ENST00000453705 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
BRCC3-208ENST00000453705 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
BRCC3-208ENST00000453705 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
BRCC3-208ENST00000453705 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
BRCC3-208ENST00000453705 PPP6R1Q9UPN7 881 aa12.92□□□□□ -0.34
BRCC3-208ENST00000453705 ZBTB22O15209 634 aa12.92□□□□□ -0.34
BRCC3-208ENST00000453705 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
BRCC3-208ENST00000453705 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
BRCC3-208ENST00000453705 BICRAQ9NZM4 1560 aa12.8□□□□□ -0.36
BRCC3-208ENST00000453705 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.36
BRCC3-208ENST00000453705 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
BRCC3-208ENST00000453705 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
BRCC3-208ENST00000453705 TMEM132AQ24JP5 1023 aa12.75□□□□□ -0.37
BRCC3-208ENST00000453705 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
BRCC3-208ENST00000453705 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
BRCC3-208ENST00000453705 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
BRCC3-208ENST00000453705 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
BRCC3-208ENST00000453705 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
BRCC3-208ENST00000453705 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
BRCC3-208ENST00000453705 KDM2AQ9Y2K7 1162 aa12.64□□□□□ -0.39
BRCC3-208ENST00000453705 LOC105371045A0A1W2PR82 267 aa12.61□□□□□ -0.39
BRCC3-208ENST00000453705 FBLN2P98095 1184 aa12.6□□□□□ -0.39
BRCC3-208ENST00000453705 WIZO95785 1651 aa12.59□□□□□ -0.39
BRCC3-208ENST00000453705 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
BRCC3-208ENST00000453705 FOXD1Q16676 465 aa12.56□□□□□ -0.4
BRCC3-208ENST00000453705 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
BRCC3-208ENST00000453705 FKBP8Q14318 412 aa12.55□□□□□ -0.4
BRCC3-208ENST00000453705 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
BRCC3-208ENST00000453705 HRCP23327 699 aa12.53□□□□□ -0.4
BRCC3-208ENST00000453705 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRCC3-208ENST00000453705 SMARCA2P51531 1590 aa12.46□□□□□ -0.41
BRCC3-208ENST00000453705 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
BRCC3-208ENST00000453705 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
BRCC3-208ENST00000453705 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
BRCC3-208ENST00000453705 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
BRCC3-208ENST00000453705 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
BRCC3-208ENST00000453705 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
BRCC3-208ENST00000453705 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
BRCC3-208ENST00000453705 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
BRCC3-208ENST00000453705 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
BRCC3-208ENST00000453705 PRDM2Q13029 1718 aa12.27□□□□□ -0.44
BRCC3-208ENST00000453705 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
BRCC3-208ENST00000453705 CHMP4AQ9BY43 222 aa12.23□□□□□ -0.45
BRCC3-208ENST00000453705 BCL11AQ9H165 835 aa12.21□□□□□ -0.46
BRCC3-208ENST00000453705 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
BRCC3-208ENST00000453705 IGSF3O75054 1194 aa12.14□□□□□ -0.47
BRCC3-208ENST00000453705 CC2D2AQ9P2K1 1620 aa12.14□□□□□ -0.47
BRCC3-208ENST00000453705 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
BRCC3-208ENST00000453705 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
BRCC3-208ENST00000453705 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-208ENST00000453705 EEA1Q15075 1411 aa12.07□□□□□ -0.48
BRCC3-208ENST00000453705 CFTRP13569 1480 aa12.05□□□□□ -0.48
BRCC3-208ENST00000453705 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
BRCC3-208ENST00000453705 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
BRCC3-208ENST00000453705 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
BRCC3-208ENST00000453705 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms