RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 PKD1P98161 4303 aa8.46□□□□□ -1.05
CTNNB1-210ENST00000453024 XP32Q5T750 250 aa8.44□□□□□ -1.06
CTNNB1-210ENST00000453024 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
CTNNB1-210ENST00000453024 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
CTNNB1-210ENST00000453024 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
CTNNB1-210ENST00000453024 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
CTNNB1-210ENST00000453024 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
CTNNB1-210ENST00000453024 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
CTNNB1-210ENST00000453024 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
CTNNB1-210ENST00000453024 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
CTNNB1-210ENST00000453024 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
CTNNB1-210ENST00000453024 HSPG2P98160 4391 aa8.1□□□□□ -1.11
CTNNB1-210ENST00000453024 M0QZ58 72 aa8.08□□□□□ -1.12
CTNNB1-210ENST00000453024 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
CTNNB1-210ENST00000453024 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
CTNNB1-210ENST00000453024 FAT1Q14517 4588 aa8.07□□□□□ -1.12
CTNNB1-210ENST00000453024 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
CTNNB1-210ENST00000453024 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
CTNNB1-210ENST00000453024 KRTAP10-4P60372 401 aaPredicted RBP7.98□□□□□ -1.13
CTNNB1-210ENST00000453024 MYCBP2O75592 4640 aa7.95□□□□□ -1.14
CTNNB1-210ENST00000453024 TNXBP22105 4242 aa7.93□□□□□ -1.14
CTNNB1-210ENST00000453024 R4GN34 69 aa7.79□□□□□ -1.16
CTNNB1-210ENST00000453024 LPAP08519 4548 aa7.77□□□□□ -1.17
CTNNB1-210ENST00000453024 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
CTNNB1-210ENST00000453024 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
CTNNB1-210ENST00000453024 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
CTNNB1-210ENST00000453024 DNHD1Q96M86 4753 aa7.63□□□□□ -1.19
CTNNB1-210ENST00000453024 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
CTNNB1-210ENST00000453024 LRP2P98164 4655 aa7.53□□□□□ -1.2
CTNNB1-210ENST00000453024 KMT2CQ8NEZ4 4911 aaKnown RBP7.53□□□□□ -1.2
CTNNB1-210ENST00000453024 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
CTNNB1-210ENST00000453024 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
CTNNB1-210ENST00000453024 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
CTNNB1-210ENST00000453024 Q5VSD8 79 aa7.34□□□□□ -1.23
CTNNB1-210ENST00000453024 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.23
CTNNB1-210ENST00000453024 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
CTNNB1-210ENST00000453024 TNP1P09430 55 aa7.27□□□□□ -1.25
CTNNB1-210ENST00000453024 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
CTNNB1-210ENST00000453024 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
CTNNB1-210ENST00000453024 RYR2Q92736 4967 aa7.16□□□□□ -1.26
CTNNB1-210ENST00000453024 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
CTNNB1-210ENST00000453024 INE1O15225 51 aa7.1□□□□□ -1.27
CTNNB1-210ENST00000453024 RYR1P21817 5038 aa7.1□□□□□ -1.27
CTNNB1-210ENST00000453024 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
CTNNB1-210ENST00000453024 ABCA13Q86UQ4 5058 aa7□□□□□ -1.29
CTNNB1-210ENST00000453024 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
CTNNB1-210ENST00000453024 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
CTNNB1-210ENST00000453024 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
CTNNB1-210ENST00000453024 RYR3Q15413 4870 aa6.84□□□□□ -1.32
CTNNB1-210ENST00000453024 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
CTNNB1-210ENST00000453024 HERC1Q15751 4861 aa6.73□□□□□ -1.33
CTNNB1-210ENST00000453024 MUC2Q02817 5179 aa6.68□□□□□ -1.34
CTNNB1-210ENST00000453024 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
CTNNB1-210ENST00000453024 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
CTNNB1-210ENST00000453024 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
CTNNB1-210ENST00000453024 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
CTNNB1-210ENST00000453024 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
CTNNB1-210ENST00000453024 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CTNNB1-210ENST00000453024 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
CTNNB1-210ENST00000453024 EPPK1P58107 5090 aaKnown RBP6.46□□□□□ -1.38
CTNNB1-210ENST00000453024 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
CTNNB1-210ENST00000453024 J3QL48 77 aa6.31□□□□□ -1.4
CTNNB1-210ENST00000453024 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
CTNNB1-210ENST00000453024 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
CTNNB1-210ENST00000453024 BIRC6Q9NR09 4857 aa6.27□□□□□ -1.41
CTNNB1-210ENST00000453024 HERC2O95714 4834 aa6.26□□□□□ -1.41
CTNNB1-210ENST00000453024 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
CTNNB1-210ENST00000453024 MT1XP80297 61 aa6.24□□□□□ -1.41
CTNNB1-210ENST00000453024 HMCN2Q8NDA2 5059 aa6.21□□□□□ -1.42
CTNNB1-210ENST00000453024 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
CTNNB1-210ENST00000453024 MT1FP04733 61 aa6.18□□□□□ -1.42
CTNNB1-210ENST00000453024 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
CTNNB1-210ENST00000453024 M0R2T5 61 aa6.16□□□□□ -1.42
CTNNB1-210ENST00000453024 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.43
CTNNB1-210ENST00000453024 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
CTNNB1-210ENST00000453024 MT2AP02795 61 aa6.12□□□□□ -1.43
CTNNB1-210ENST00000453024 MT1BP07438 61 aa6.12□□□□□ -1.43
CTNNB1-210ENST00000453024 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
CTNNB1-210ENST00000453024 MT1HP80294 61 aa6.03□□□□□ -1.44
CTNNB1-210ENST00000453024 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
CTNNB1-210ENST00000453024 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
CTNNB1-210ENST00000453024 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
CTNNB1-210ENST00000453024 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
CTNNB1-210ENST00000453024 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
CTNNB1-210ENST00000453024 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
CTNNB1-210ENST00000453024 KMT2DO14686 5537 aa5.79□□□□□ -1.48
CTNNB1-210ENST00000453024 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
CTNNB1-210ENST00000453024 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
CTNNB1-210ENST00000453024 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
CTNNB1-210ENST00000453024 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CTNNB1-210ENST00000453024 KRTAP19-7Q3SYF9 63 aa5.56□□□□□ -1.52
CTNNB1-210ENST00000453024 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
CTNNB1-210ENST00000453024 USH2AO75445 5202 aa5.46□□□□□ -1.53
CTNNB1-210ENST00000453024 MT1LQ93083 61 aa5.43□□□□□ -1.54
CTNNB1-210ENST00000453024 LCE2BO14633 110 aa5.42□□□□□ -1.54
CTNNB1-210ENST00000453024 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
CTNNB1-210ENST00000453024 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
CTNNB1-210ENST00000453024 MT1EP04732 61 aa5.32□□□□□ -1.56
CTNNB1-210ENST00000453024 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
CTNNB1-210ENST00000453024 MT1GP13640 62 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms